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3D4S
Asym. Unit
Info
Asym.Unit (157 KB)
Biol.Unit 1 (152 KB)
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(1)
Title
:
CHOLESTEROL BOUND FORM OF HUMAN BETA2 ADRENERGIC RECEPTOR.
Authors
:
M. A. Hanson, V. Cherezov, C. B. Roth, M. T. Griffith, V-P. Jaakola, E. Y. J. Velasquez, P. Kuhn, R. C. Stevens, Accelerated Technologies Cen Gene To 3D Structure (Atcg3D), Gpcr Network (Gpcr)
Date
:
14 May 08 (Deposition) - 17 Jun 08 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Gpcr, Membrane Protein, Lysozyme, Fusion, Adrenergic, Timolol, G- Protein Coupled Receptor, Glycoprotein, Lipoprotein, Palmitate, Phosphoprotein, Receptor, Transducer, Transmembrane, Structural Genomics, Psi-2, Protein Structure Initiative, Accelerated Technologies Center For Gene To 3D Structure, Atcg3D, Gpcr Network
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Hanson, V. Cherezov, M. T. Griffith, C. B. Roth, V. P. Jaakola, E. Y. Chien, J. Velasquez, P. Kuhn, R. C. Stevens
A Specific Cholesterol Binding Site Is Established By The 2. 8 A Structure Of The Human Beta2-Adrenergic Receptor.
Structure V. 16 897 2008
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: CHOLESTEROL (CLRa)
1b: CHOLESTEROL (CLRb)
2a: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCa)
2b: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCb)
2c: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCc)
3a: (2S)-1-(TERT-BUTYLAMINO)-3-[(4-MOR... (TIMa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CLR
2
Ligand/Ion
CHOLESTEROL
2
OLC
3
Ligand/Ion
(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
3
TIM
1
Ligand/Ion
(2S)-1-(TERT-BUTYLAMINO)-3-[(4-MORPHOLIN-4-YL-1,2,5-THIADIAZOL-3-YL)OXY]PROPAN-2-OL
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:110 , ASP A:113 , VAL A:114 , VAL A:117 , THR A:118 , TYR A:199 , SER A:203 , TRP A:286 , PHE A:290 , ASN A:293 , ASN A:312 , TYR A:316
BINDING SITE FOR RESIDUE TIM A 401
2
AC2
SOFTWARE
TYR A:70 , THR A:73 , CYS A:77 , ARG A:151 , CLR A:403
BINDING SITE FOR RESIDUE CLR A 402
3
AC3
SOFTWARE
ILE A:55 , THR A:73 , CYS A:77 , LEU A:80 , ALA A:85 , CLR A:402 , HOH A:520
BINDING SITE FOR RESIDUE CLR A 403
4
AC4
SOFTWARE
SER A:41 , VAL A:129 , PHE A:133 , LEU A:144 , LEU A:145
BINDING SITE FOR RESIDUE OLC A 404
5
AC5
SOFTWARE
THR A:100 , TYR A:132 , PHE A:133 , PHE A:217 , VAL A:218 , ARG A:221
BINDING SITE FOR RESIDUE OLC A 405
6
AC6
SOFTWARE
PHE A:49 , LEU A:53 , GLN A:197 , LEU A:339 , HOH A:507
BINDING SITE FOR RESIDUE OLC A 406
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_003454 (V34M, chain A, )
2: VAR_009125 (I159F, chain A, )
3: VAR_009124 (I159L, chain A, )
4: VAR_003455 (T164I, chain A, )
5: VAR_025101 (S220C, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_003454
V
34
M
ADRB2_HUMAN
Polymorphism
---
A
V
34
M
2
UniProt
VAR_009125
I
159
F
ADRB2_HUMAN
Polymorphism
---
A
I
159
F
3
UniProt
VAR_009124
I
159
L
ADRB2_HUMAN
Polymorphism
---
A
I
159
L
4
UniProt
VAR_003455
T
164
I
ADRB2_HUMAN
Polymorphism
1800888
A
T
164
I
5
UniProt
VAR_025101
S
220
C
ADRB2_HUMAN
Polymorphism
3729943
A
S
220
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_PROTEIN_RECEP_F1_1 (A:119-135)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_PROTEIN_RECEP_F1_1
PS00237
G-protein coupled receptors family 1 signature.
ADRB2_HUMAN
119-135
1
A:119-135
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_3d4sA02 (A:1002-1161)
2a: CATH_3d4sA01 (A:32-230,A:263-342)
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)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Lysozyme
(1131)
Homologous Superfamily
:
[code=1.10.530.40, no name defined]
(526)
Homo sapiens, bacteriophage t4. Organism_taxid: 9606.
(1)
1a
3d4sA02
A:1002-1161
Architecture
:
Up-down Bundle
(3216)
Topology
:
Rhopdopsin 7-helix transmembrane proteins
(128)
Homologous Superfamily
:
Rhopdopsin 7-helix transmembrane proteins
(128)
Homo sapiens, bacteriophage t4. Organism_taxid: 9606.
(1)
2a
3d4sA01
A:32-230,A:263-342
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (157 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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