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3COH
Asym. Unit
Info
Asym.Unit (89 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (43 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AURORA-A IN COMPLEX WITH A PENTACYCLIC INHIBITOR
Authors
:
C. Wiesmann, T. E. Raswson, A. G. Cochran
Date
:
28 Mar 08 (Deposition) - 17 Feb 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Aurora-A, Inhibitor Complex, Atp-Binding, Cell Cycle, Kinase, Nucleotide-Binding, Phosphoprotein, Serine/Threonine-Protein Kinase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. E. Rawson, M. Ruth, E. Blackwood, D. Burdick, L. Corson, J. Dotson, J. Drummond, C. Fields, G. J. Georges, B. Goller, J. Halladay, T. Hunsaker, T. Kleinheinz, H. W. Krell, J. Li, J. Liang, A. Limberg, A. Mcnutt, J. Moffat, G. Phillips, Y. Ran, B. Safina, M. Ultsch, L. Walker, C. Wiesmann, B. Zhang, A. Zhou, B. Y. Zhu, P. Ruger, A. G. Cochran
A Pentacyclic Aurora Kinase Inhibitor (Aki-001) With High I Vivo Potency And Oral Bioavailability.
J. Med. Chem. V. 51 4465 2008
[
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: 8-ETHYL-3,10,10-TRIMETHYL-4,5,6,8,... (83Ha)
1b: 8-ETHYL-3,10,10-TRIMETHYL-4,5,6,8,... (83Hb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
83H
2
Ligand/Ion
8-ETHYL-3,10,10-TRIMETHYL-4,5,6,8,10,12-HEXAHYDROPYRAZOLO[4',3':6,7]CYCLOHEPTA[1,2-B]PYRROLO[2,3-F]INDOL-9(1H)-ONE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:139 , ALA A:160 , LEU A:194 , GLU A:211 , TYR A:212 , ALA A:213 , PRO A:214 , LEU A:215 , GLY A:216 , LEU A:263
BINDING SITE FOR RESIDUE 83H A 1
2
AC2
SOFTWARE
LEU B:139 , ALA B:160 , LEU B:194 , GLU B:211 , TYR B:212 , ALA B:213 , PRO B:214 , GLY B:216
BINDING SITE FOR RESIDUE 83H B 2
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041128 (S155R, chain A/B, )
2: VAR_041129 (V174M, chain A/B, )
3: VAR_041130 (M373V, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041128
S
155
R
AURKA_HUMAN
Unclassified
---
A/B
S
155
R
2
UniProt
VAR_041129
V
174
M
AURKA_HUMAN
Unclassified
---
A/B
V
174
M
3
UniProt
VAR_041130
M
373
V
AURKA_HUMAN
Polymorphism
33923703
A/B
M
373
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:139-162,B:139-162)
2: PROTEIN_KINASE_ST (A:252-264,B:252-264)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
AURKA_HUMAN
139-162
2
A:139-162
B:139-162
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
AURKA_HUMAN
252-264
2
A:252-264
B:252-264
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Exons
(5, 10)
Info
All Exons
Exon 1.8b (A:128-189 | B:128-189)
Exon 1.9 (A:189-235 | B:189-235)
Exon 1.10b (A:236-274 | B:236-274)
Exon 1.11a (A:289-343 | B:289-343)
Exon 1.11c (A:344-388 | B:344-388)
View:
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All Exon Boundaries
1: Boundary 1.7/1.8b
2: Boundary 1.8b/1.9
3: Boundary 1.9/1.10b
4: Boundary 1.10b/1.11a
5: Boundary 1.11a/1.11c
6: Boundary 1.11c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000312783
1c
ENSE00001523254
chr20:
54967351-54967224
128
AURKA_HUMAN
-
0
0
-
-
1.2
ENST00000312783
2
ENSE00001270100
chr20:
54965721-54965612
110
AURKA_HUMAN
-
0
0
-
-
1.5b
ENST00000312783
5b
ENSE00000845695
chr20:
54963258-54963212
47
AURKA_HUMAN
1-14
14
0
-
-
1.6b
ENST00000312783
6b
ENSE00002179826
chr20:
54961589-54961313
277
AURKA_HUMAN
15-107
93
0
-
-
1.7
ENST00000312783
7
ENSE00000991660
chr20:
54959380-54959326
55
AURKA_HUMAN
107-125
19
0
-
-
1.8b
ENST00000312783
8b
ENSE00002188846
chr20:
54958232-54958041
192
AURKA_HUMAN
125-189
65
2
A:128-189
B:128-189
62
62
1.9
ENST00000312783
9
ENSE00000512389
chr20:
54956627-54956489
139
AURKA_HUMAN
189-235
47
2
A:189-235
B:189-235
47
47
1.10b
ENST00000312783
10b
ENSE00000662874
chr20:
54948612-54948464
149
AURKA_HUMAN
236-285
50
2
A:236-274
B:236-274
39
39
1.11a
ENST00000312783
11a
ENSE00000512391
chr20:
54945715-54945541
175
AURKA_HUMAN
285-343
59
2
A:289-343
B:289-343
55
55
1.11c
ENST00000312783
11c
ENSE00001257584
chr20:
54945396-54944446
951
AURKA_HUMAN
344-403
60
2
A:344-388
B:344-388
45
45
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3coha_ (A:)
1b: SCOP_d3cohb_ (B:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Aurora-related kinase 1 (aurora-2)
(39)
Human (Homo sapiens) [TaxId: 9606]
(39)
1a
d3coha_
A:
1b
d3cohb_
B:
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_3cohA01 (A:128-216)
1b: CATH_3cohB01 (B:128-216)
2a: CATH_3cohA02 (A:217-387)
2b: CATH_3cohB02 (B:217-387)
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)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
3cohA01
A:128-216
1b
3cohB01
B:128-216
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
3cohA02
A:217-387
2b
3cohB02
B:217-387
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asym.Unit (89 KB)
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