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3CIX
Asym. Unit
Info
Asym.Unit (141 KB)
Biol.Unit 1 (134 KB)
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(1)
Title
:
X-RAY STRUCTURE OF THE [FEFE]-HYDROGENASE MATURASE HYDE FROM THERMOTOGA MARITIMA IN COMPLEX WITH THIOCYANATE
Authors
:
Y. Nicolet, J. K. Ruback, M. C. Posewitz, P. Amara, C. Mathevon, M. Atta, M. Fontecave, J. C. Fontecilla-Camps
Date
:
12 Mar 08 (Deposition) - 08 Apr 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Radical Adomet Protein, Fefe-Hydrogenase Maturation, Beta Barrel, Fe4S4 Cluster, Thiocyanate, Fe2S2 Cluster, Adomet Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Nicolet, J. K. Rubach, M. C. Posewitz, P. Amara, C. Mathevon, M. Atta M. Fontecave, J. C. Fontecilla-Camps
X-Ray Structure Of The [Fefe]-Hydrogenase Maturase Hyde Fro Thermotoga Maritima
J. Biol. Chem. V. 283 18861 2008
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Hetero Components
(10, 15)
Info
All Hetero Components
01a: CHLORIDE ION (CLa)
01b: CHLORIDE ION (CLb)
02a: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSa)
02b: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSb)
02c: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSc)
02d: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSd)
02e: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSe)
03a: S-HYDROXYCYSTEINE (CSOa)
04a: FE2/S2 (INORGANIC) CLUSTER (FESa)
05a: GLYCEROL (GOLa)
06a: DI(HYDROXYETHYL)ETHER (PEGa)
07a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
08a: SULFOACETIC ACID (SATa)
09a: THIOCYANATE ION (SCNa)
10a: IRON/SULFUR CLUSTER (SF4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
CPS
5
Ligand/Ion
3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE
3
CSO
1
Mod. Amino Acid
S-HYDROXYCYSTEINE
4
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
5
GOL
1
Ligand/Ion
GLYCEROL
6
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
8
SAT
1
Ligand/Ion
SULFOACETIC ACID
9
SCN
1
Ligand/Ion
THIOCYANATE ION
10
SF4
1
Ligand/Ion
IRON/SULFUR CLUSTER
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:54 , THR A:134 , ARG A:155
BINDING SITE FOR RESIDUE SCN A 1712
02
AC2
SOFTWARE
ARG A:159 , THR A:268 , THR A:269 , ALA A:270 , TYR A:306 , HOH A:2802 , HOH A:2825
BINDING SITE FOR RESIDUE CL A 1713
03
AC3
SOFTWARE
ARG A:159 , HOH A:2604 , HOH A:2826
BINDING SITE FOR RESIDUE CL A 1714
04
AC4
SOFTWARE
CYS A:63 , CYS A:67 , CYS A:70 , GLY A:109
BINDING SITE FOR RESIDUE SF4 A 2460
05
AC5
SOFTWARE
TYR A:69 , SER A:108 , SER A:136 , ARG A:159 , GLU A:161 , ARG A:180 , MET A:199 , PRO A:229 , ILE A:231 , TYR A:303 , LEU A:305 , TYR A:306 , HOH A:2472 , HOH A:2478 , HOH A:2480 , HOH A:2489 , HOH A:2526 , HOH A:2802
BINDING SITE FOR RESIDUE SAH A 1501
06
AC6
SOFTWARE
GLN A:98 , PHE A:99 , GLY A:100 , GLU A:280 , ARG A:284 , MET A:324 , LEU A:329 , LEU A:330 , HOH A:2469 , HOH A:2504 , HOH A:2554 , HOH A:2566 , HOH A:2684 , HOH A:2774 , HOH A:2793
BINDING SITE FOR RESIDUE CPS A 1701
07
AC7
SOFTWARE
LYS A:170 , SER A:297 , LYS A:315 , ASP A:316
BINDING SITE FOR RESIDUE SAT A 1722
08
AC8
SOFTWARE
LYS A:37 , ASP A:40 , ARG A:284 , THR A:317 , HOH A:2551 , HOH A:2558 , HOH A:2608 , HOH A:2636 , HOH A:2655 , HOH A:2661
BINDING SITE FOR RESIDUE CPS A 1702
09
AC9
SOFTWARE
ARG A:29 , GLU A:33 , PHE A:246 , THR A:247 , LEU A:250 , HOH A:2553 , HOH A:2557 , HOH A:2563
BINDING SITE FOR RESIDUE CPS A 1703
10
BC1
SOFTWARE
ARG A:29 , LYS A:315 , THR A:317 , ALA A:318 , HOH A:2592 , HOH A:2686 , HOH A:2689 , HOH A:2758
BINDING SITE FOR RESIDUE CPS A 1704
11
BC2
SOFTWARE
LYS A:128 , MET A:324 , LYS A:325 , GLU A:328 , HOH A:2669 , HOH A:2702 , HOH A:2736 , HOH A:2737 , HOH A:2774
BINDING SITE FOR RESIDUE CPS A 1705
12
BC3
SOFTWARE
ARG A:279 , CYS A:311 , CYS A:319 , CYS A:322 , HOH A:2461
BINDING SITE FOR RESIDUE FES A 1707
13
BC4
SOFTWARE
ASP A:337 , TRP A:338 , GLY A:339 , GLY A:340 , LYS A:342
BINDING SITE FOR RESIDUE PEG A 1706
14
BC5
SOFTWARE
LYS A:243 , GLY A:244 , ASP A:245 , PHE A:246 , HOH A:2542
BINDING SITE FOR RESIDUE GOL A 1716
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (141 KB)
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