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3CBA
Biol. Unit 2
Info
Asym.Unit (66 KB)
Biol.Unit 1 (39 KB)
Biol.Unit 2 (41 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF LIPOPEPTIDE DETERGENT (LPD-12) (HEXAGONAL)
Authors
:
D. N. Ho, N. C. Pomroy, J. A. Cuesta-Seijo, G. G. Prive
Date
:
21 Feb 08 (Deposition) - 09 Sep 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Biol. Unit 2: I,J,K,L (2x)
Keywords
:
Alpha Helix, Acyl Chains, Detergent, Amphiphilic, Lipopeptide, Self-Assembling Peptide, De Novo Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. N. Ho, N. C. Pomroy, J. A. Cuesta-Seijo, G. G. Prive
Packing And Twinning In Orthorhombic And Hexagonal Crystals Of Lipopeptide Detergent (Lpd-12)
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(4, 46)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
1c: ACETYL GROUP (ACEc)
1d: ACETYL GROUP (ACEd)
1e: ACETYL GROUP (ACEe)
1f: ACETYL GROUP (ACEf)
1g: ACETYL GROUP (ACEg)
1h: ACETYL GROUP (ACEh)
1i: ACETYL GROUP (ACEi)
1j: ACETYL GROUP (ACEj)
1k: ACETYL GROUP (ACEk)
1l: ACETYL GROUP (ACEl)
2a: DECYL-BETA-D-MALTOPYRANOSIDE (DMUa)
2b: DECYL-BETA-D-MALTOPYRANOSIDE (DMUb)
2c: DECYL-BETA-D-MALTOPYRANOSIDE (DMUc)
2d: DECYL-BETA-D-MALTOPYRANOSIDE (DMUd)
2e: DECYL-BETA-D-MALTOPYRANOSIDE (DMUe)
2f: DECYL-BETA-D-MALTOPYRANOSIDE (DMUf)
2g: DECYL-BETA-D-MALTOPYRANOSIDE (DMUg)
2h: DECYL-BETA-D-MALTOPYRANOSIDE (DMUh)
2i: DECYL-BETA-D-MALTOPYRANOSIDE (DMUi)
2j: DECYL-BETA-D-MALTOPYRANOSIDE (DMUj)
2k: DECYL-BETA-D-MALTOPYRANOSIDE (DMUk)
2l: DECYL-BETA-D-MALTOPYRANOSIDE (DMUl)
2m: DECYL-BETA-D-MALTOPYRANOSIDE (DMUm)
2n: DECYL-BETA-D-MALTOPYRANOSIDE (DMUn)
2o: DECYL-BETA-D-MALTOPYRANOSIDE (DMUo)
2p: DECYL-BETA-D-MALTOPYRANOSIDE (DMUp)
3a: AMINO GROUP (NH2a)
3b: AMINO GROUP (NH2b)
3c: AMINO GROUP (NH2c)
3d: AMINO GROUP (NH2d)
3e: AMINO GROUP (NH2e)
3f: AMINO GROUP (NH2f)
3g: AMINO GROUP (NH2g)
3h: AMINO GROUP (NH2h)
3i: AMINO GROUP (NH2i)
3j: AMINO GROUP (NH2j)
3k: AMINO GROUP (NH2k)
3l: AMINO GROUP (NH2l)
4a: N~5~-DODECANOYL-L-ORNITHINE (O12a)
4b: N~5~-DODECANOYL-L-ORNITHINE (O12b)
4c: N~5~-DODECANOYL-L-ORNITHINE (O12c)
4d: N~5~-DODECANOYL-L-ORNITHINE (O12d)
4e: N~5~-DODECANOYL-L-ORNITHINE (O12e)
4f: N~5~-DODECANOYL-L-ORNITHINE (O12f)
4g: N~5~-DODECANOYL-L-ORNITHINE (O12g)
4h: N~5~-DODECANOYL-L-ORNITHINE (O12h)
4i: N~5~-DODECANOYL-L-ORNITHINE (O12i)
4j: N~5~-DODECANOYL-L-ORNITHINE (O12j)
4k: N~5~-DODECANOYL-L-ORNITHINE (O12k)
4l: N~5~-DODECANOYL-L-ORNITHINE (O12l)
4m: N~5~-DODECANOYL-L-ORNITHINE (O12m)
4n: N~5~-DODECANOYL-L-ORNITHINE (O12n)
4o: N~5~-DODECANOYL-L-ORNITHINE (O12o)
4p: N~5~-DODECANOYL-L-ORNITHINE (O12p)
4q: N~5~-DODECANOYL-L-ORNITHINE (O12q)
4r: N~5~-DODECANOYL-L-ORNITHINE (O12r)
4s: N~5~-DODECANOYL-L-ORNITHINE (O12s)
4t: N~5~-DODECANOYL-L-ORNITHINE (O12t)
4u: N~5~-DODECANOYL-L-ORNITHINE (O12u)
4v: N~5~-DODECANOYL-L-ORNITHINE (O12v)
4w: N~5~-DODECANOYL-L-ORNITHINE (O12w)
4x: N~5~-DODECANOYL-L-ORNITHINE (O12x)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
8
Mod. Amino Acid
ACETYL GROUP
2
DMU
14
Ligand/Ion
DECYL-BETA-D-MALTOPYRANOSIDE
3
NH2
8
Mod. Amino Acid
AMINO GROUP
4
O12
16
Mod. Amino Acid
N~5~-DODECANOYL-L-ORNITHINE
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC9 (SOFTWARE)
3: BC1 (SOFTWARE)
4: BC2 (SOFTWARE)
5: BC3 (SOFTWARE)
6: BC4 (SOFTWARE)
7: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:8 , HOH A:1082 , ALA H:5 , LYS H:8 , HOH L:1157
BINDING SITE FOR RESIDUE DMU A 501
2
AC9
SOFTWARE
ALA I:1 , GLU I:4 , ALA I:5 , LYS I:8 , HOH I:1057
BINDING SITE FOR RESIDUE DMU I 510
3
BC1
SOFTWARE
LYS J:8 , ALA J:9 , TYR J:12 , TYR K:12
BINDING SITE FOR RESIDUE DMU J 511
4
BC2
SOFTWARE
ALA L:6
BINDING SITE FOR RESIDUE DMU K 512
5
BC3
SOFTWARE
TYR J:12 , TYR K:12
BINDING SITE FOR RESIDUE DMU J 513
6
BC4
SOFTWARE
HOH L:1072
BINDING SITE FOR RESIDUE DMU I 514
7
BC5
SOFTWARE
HOH I:1174
BINDING SITE FOR RESIDUE DMU J 515
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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Asym.Unit (66 KB)
Header - Asym.Unit
Biol.Unit 1 (39 KB)
Header - Biol.Unit 1
Biol.Unit 2 (41 KB)
Header - Biol.Unit 2
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