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3C92
Asym. Unit
Info
Asym.Unit (936 KB)
Biol.Unit 1 (931 KB)
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(1)
Title
:
THERMOPLASMA ACIDOPHILUM 20S PROTEASOME WITH A CLOSED GATE
Authors
:
J. Rabl, D. M. Smith, Y. Yu, S. C. Chang, A. L. Goldberg, Y. Cheng
Date
:
14 Feb 08 (Deposition) - 05 Aug 08 (Release) - 07 May 14 (Revision)
Method
:
ELECTRON MICROSCOPY
Resolution
:
6.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2 (1x)
Keywords
:
Protein Complex, Hydrolase, Protease, Proteasome, Threonine Protease
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Rabl, D. M. Smith, Y. Yu, S. C. Chang, A. L. Goldberg, Y. Cheng
Mechanism Of Gate Opening In The 20S Proteasome By The Proteasomal Atpases.
Mol. Cell V. 30 360 2008
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Hetero Components
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Sites
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PROSITE Patterns/Profiles
(2, 28)
Info
All PROSITE Patterns/Profiles
1: PROTEASOME_BETA_1 (1:4-51,2:4-51,H:4-51,I:4-51,J:4-51...)
2: PROTEASOME_ALPHA_2 (A:23-233,B:23-233,C:23-233,D:23-23...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEASOME_BETA_1
PS00854
Proteasome beta-type subunits signature.
PSB_THEAC
12-59
14
1:4-51
2:4-51
H:4-51
I:4-51
J:4-51
K:4-51
L:4-51
M:4-51
N:4-51
V:4-51
W:4-51
X:4-51
Y:4-51
Z:4-51
2
PROTEASOME_ALPHA_2
PS51475
Proteasome alpha-type subunit profile.
PSA_THEAC
23-233
14
A:23-233
B:23-233
C:23-233
D:23-233
E:23-233
F:23-233
G:23-233
O:23-233
P:23-233
Q:23-233
R:23-233
S:23-233
T:23-233
U:23-233
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 28)
Info
All SCOP Domains
1a: SCOP_d3c92a1 (A:13-233)
1b: SCOP_d3c92b1 (B:13-233)
1c: SCOP_d3c92c1 (C:13-233)
1d: SCOP_d3c92d1 (D:13-233)
1e: SCOP_d3c92e1 (E:13-233)
1f: SCOP_d3c92f1 (F:13-233)
1g: SCOP_d3c92g1 (G:13-233)
1h: SCOP_d3c92o1 (O:13-233)
1i: SCOP_d3c92p1 (P:13-233)
1j: SCOP_d3c92q1 (Q:13-233)
1k: SCOP_d3c92r1 (R:13-233)
1l: SCOP_d3c92s1 (S:13-233)
1m: SCOP_d3c92t1 (T:13-233)
1n: SCOP_d3c92u1 (U:13-233)
2a: SCOP_d3c9211 (1:1-203)
2b: SCOP_d3c9221 (2:1-203)
2c: SCOP_d3c92h1 (H:1-203)
2d: SCOP_d3c92i1 (I:1-203)
2e: SCOP_d3c92j1 (J:1-203)
2f: SCOP_d3c92k1 (K:1-203)
2g: SCOP_d3c92l1 (L:1-203)
2h: SCOP_d3c92m1 (M:1-203)
2i: SCOP_d3c92n1 (N:1-203)
2j: SCOP_d3c92v1 (V:1-203)
2k: SCOP_d3c92w1 (W:1-203)
2l: SCOP_d3c92x1 (X:1-203)
2m: SCOP_d3c92y1 (Y:1-203)
2n: SCOP_d3c92z1 (Z:1-203)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Proteasome subunits
(222)
Protein domain
:
Proteasome alpha subunit (non-catalytic)
(66)
Thermoplasma acidophilum [TaxId: 2303]
(3)
1a
d3c92a1
A:13-233
1b
d3c92b1
B:13-233
1c
d3c92c1
C:13-233
1d
d3c92d1
D:13-233
1e
d3c92e1
E:13-233
1f
d3c92f1
F:13-233
1g
d3c92g1
G:13-233
1h
d3c92o1
O:13-233
1i
d3c92p1
P:13-233
1j
d3c92q1
Q:13-233
1k
d3c92r1
R:13-233
1l
d3c92s1
S:13-233
1m
d3c92t1
T:13-233
1n
d3c92u1
U:13-233
Protein domain
:
Proteasome beta subunit (catalytic)
(61)
Thermoplasma acidophilum [TaxId: 2303]
(5)
2a
d3c9211
1:1-203
2b
d3c9221
2:1-203
2c
d3c92h1
H:1-203
2d
d3c92i1
I:1-203
2e
d3c92j1
J:1-203
2f
d3c92k1
K:1-203
2g
d3c92l1
L:1-203
2h
d3c92m1
M:1-203
2i
d3c92n1
N:1-203
2j
d3c92v1
V:1-203
2k
d3c92w1
W:1-203
2l
d3c92x1
X:1-203
2m
d3c92y1
Y:1-203
2n
d3c92z1
Z:1-203
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Asymmetric Unit 1
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