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3C5Y
Asym. Unit
Info
Asym.Unit (611 KB)
Biol.Unit 1 (154 KB)
Biol.Unit 2 (162 KB)
Biol.Unit 3 (155 KB)
Biol.Unit 4 (151 KB)
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Title
:
CRYSTAL STRUCTURE OF A PUTATIVE RIBOSE 5-PHOSPHATE ISOMERASE (SARO_3514) FROM NOVOSPHINGOBIUM AROMATICIVORANS DSM AT 1.81 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
01 Feb 08 (Deposition) - 19 Feb 08 (Release) - 12 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.81
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Biol. Unit 3: I,J,K,L (1x)
Biol. Unit 4: M,N,O,P (1x)
Keywords
:
Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Putative Ribose 5-Phosphate Isomerase (Yp_001165900. 1) From Novosphingobium Aromaticivorans Dsm 12444 At 1. 81 A Resolution
To Be Published
[
close entry info
]
Hetero Components
(4, 229)
Info
All Hetero Components
1a: 3-SULFINOALANINE (CSDa)
1b: 3-SULFINOALANINE (CSDb)
1c: 3-SULFINOALANINE (CSDc)
1d: 3-SULFINOALANINE (CSDd)
1e: 3-SULFINOALANINE (CSDe)
1f: 3-SULFINOALANINE (CSDf)
1g: 3-SULFINOALANINE (CSDg)
1h: 3-SULFINOALANINE (CSDh)
1i: 3-SULFINOALANINE (CSDi)
1j: 3-SULFINOALANINE (CSDj)
1k: 3-SULFINOALANINE (CSDk)
1l: 3-SULFINOALANINE (CSDl)
1m: 3-SULFINOALANINE (CSDm)
1n: 3-SULFINOALANINE (CSDn)
1o: 3-SULFINOALANINE (CSDo)
1p: 3-SULFINOALANINE (CSDp)
2a: 1,2-ETHANEDIOL (EDOa)
2aa: 1,2-ETHANEDIOL (EDOaa)
2ab: 1,2-ETHANEDIOL (EDOab)
2ac: 1,2-ETHANEDIOL (EDOac)
2ad: 1,2-ETHANEDIOL (EDOad)
2ae: 1,2-ETHANEDIOL (EDOae)
2af: 1,2-ETHANEDIOL (EDOaf)
2ag: 1,2-ETHANEDIOL (EDOag)
2ah: 1,2-ETHANEDIOL (EDOah)
2ai: 1,2-ETHANEDIOL (EDOai)
2aj: 1,2-ETHANEDIOL (EDOaj)
2ak: 1,2-ETHANEDIOL (EDOak)
2al: 1,2-ETHANEDIOL (EDOal)
2am: 1,2-ETHANEDIOL (EDOam)
2an: 1,2-ETHANEDIOL (EDOan)
2ao: 1,2-ETHANEDIOL (EDOao)
2ap: 1,2-ETHANEDIOL (EDOap)
2aq: 1,2-ETHANEDIOL (EDOaq)
2ar: 1,2-ETHANEDIOL (EDOar)
2as: 1,2-ETHANEDIOL (EDOas)
2at: 1,2-ETHANEDIOL (EDOat)
2au: 1,2-ETHANEDIOL (EDOau)
2av: 1,2-ETHANEDIOL (EDOav)
2aw: 1,2-ETHANEDIOL (EDOaw)
2ax: 1,2-ETHANEDIOL (EDOax)
2ay: 1,2-ETHANEDIOL (EDOay)
2az: 1,2-ETHANEDIOL (EDOaz)
2b: 1,2-ETHANEDIOL (EDOb)
2ba: 1,2-ETHANEDIOL (EDOba)
2bb: 1,2-ETHANEDIOL (EDObb)
2bc: 1,2-ETHANEDIOL (EDObc)
2bd: 1,2-ETHANEDIOL (EDObd)
2be: 1,2-ETHANEDIOL (EDObe)
2bf: 1,2-ETHANEDIOL (EDObf)
2bg: 1,2-ETHANEDIOL (EDObg)
2bh: 1,2-ETHANEDIOL (EDObh)
2bi: 1,2-ETHANEDIOL (EDObi)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
2r: 1,2-ETHANEDIOL (EDOr)
2s: 1,2-ETHANEDIOL (EDOs)
2t: 1,2-ETHANEDIOL (EDOt)
2u: 1,2-ETHANEDIOL (EDOu)
2v: 1,2-ETHANEDIOL (EDOv)
2w: 1,2-ETHANEDIOL (EDOw)
2x: 1,2-ETHANEDIOL (EDOx)
2y: 1,2-ETHANEDIOL (EDOy)
2z: 1,2-ETHANEDIOL (EDOz)
3a: SELENOMETHIONINE (MSEa)
3aa: SELENOMETHIONINE (MSEaa)
3ab: SELENOMETHIONINE (MSEab)
3ac: SELENOMETHIONINE (MSEac)
3ad: SELENOMETHIONINE (MSEad)
3ae: SELENOMETHIONINE (MSEae)
3af: SELENOMETHIONINE (MSEaf)
3ag: SELENOMETHIONINE (MSEag)
3ah: SELENOMETHIONINE (MSEah)
3ai: SELENOMETHIONINE (MSEai)
3aj: SELENOMETHIONINE (MSEaj)
3ak: SELENOMETHIONINE (MSEak)
3al: SELENOMETHIONINE (MSEal)
3am: SELENOMETHIONINE (MSEam)
3an: SELENOMETHIONINE (MSEan)
3ao: SELENOMETHIONINE (MSEao)
3ap: SELENOMETHIONINE (MSEap)
3aq: SELENOMETHIONINE (MSEaq)
3ar: SELENOMETHIONINE (MSEar)
3as: SELENOMETHIONINE (MSEas)
3at: SELENOMETHIONINE (MSEat)
3au: SELENOMETHIONINE (MSEau)
3av: SELENOMETHIONINE (MSEav)
3aw: SELENOMETHIONINE (MSEaw)
3ax: SELENOMETHIONINE (MSEax)
3ay: SELENOMETHIONINE (MSEay)
3az: SELENOMETHIONINE (MSEaz)
3b: SELENOMETHIONINE (MSEb)
3ba: SELENOMETHIONINE (MSEba)
3bb: SELENOMETHIONINE (MSEbb)
3bc: SELENOMETHIONINE (MSEbc)
3bd: SELENOMETHIONINE (MSEbd)
3be: SELENOMETHIONINE (MSEbe)
3bf: SELENOMETHIONINE (MSEbf)
3bg: SELENOMETHIONINE (MSEbg)
3bh: SELENOMETHIONINE (MSEbh)
3bi: SELENOMETHIONINE (MSEbi)
3bj: SELENOMETHIONINE (MSEbj)
3bk: SELENOMETHIONINE (MSEbk)
3bl: SELENOMETHIONINE (MSEbl)
3bm: SELENOMETHIONINE (MSEbm)
3bn: SELENOMETHIONINE (MSEbn)
3bo: SELENOMETHIONINE (MSEbo)
3bp: SELENOMETHIONINE (MSEbp)
3bq: SELENOMETHIONINE (MSEbq)
3br: SELENOMETHIONINE (MSEbr)
3bs: SELENOMETHIONINE (MSEbs)
3bt: SELENOMETHIONINE (MSEbt)
3bu: SELENOMETHIONINE (MSEbu)
3bv: SELENOMETHIONINE (MSEbv)
3bw: SELENOMETHIONINE (MSEbw)
3bx: SELENOMETHIONINE (MSEbx)
3by: SELENOMETHIONINE (MSEby)
3bz: SELENOMETHIONINE (MSEbz)
3c: SELENOMETHIONINE (MSEc)
3ca: SELENOMETHIONINE (MSEca)
3cb: SELENOMETHIONINE (MSEcb)
3cc: SELENOMETHIONINE (MSEcc)
3cd: SELENOMETHIONINE (MSEcd)
3ce: SELENOMETHIONINE (MSEce)
3cf: SELENOMETHIONINE (MSEcf)
3cg: SELENOMETHIONINE (MSEcg)
3ch: SELENOMETHIONINE (MSEch)
3ci: SELENOMETHIONINE (MSEci)
3cj: SELENOMETHIONINE (MSEcj)
3ck: SELENOMETHIONINE (MSEck)
3cl: SELENOMETHIONINE (MSEcl)
3cm: SELENOMETHIONINE (MSEcm)
3cn: SELENOMETHIONINE (MSEcn)
3co: SELENOMETHIONINE (MSEco)
3cp: SELENOMETHIONINE (MSEcp)
3cq: SELENOMETHIONINE (MSEcq)
3cr: SELENOMETHIONINE (MSEcr)
3cs: SELENOMETHIONINE (MSEcs)
3ct: SELENOMETHIONINE (MSEct)
3cu: SELENOMETHIONINE (MSEcu)
3cv: SELENOMETHIONINE (MSEcv)
3cw: SELENOMETHIONINE (MSEcw)
3cx: SELENOMETHIONINE (MSEcx)
3cy: SELENOMETHIONINE (MSEcy)
3cz: SELENOMETHIONINE (MSEcz)
3d: SELENOMETHIONINE (MSEd)
3da: SELENOMETHIONINE (MSEda)
3db: SELENOMETHIONINE (MSEdb)
3dc: SELENOMETHIONINE (MSEdc)
3dd: SELENOMETHIONINE (MSEdd)
3de: SELENOMETHIONINE (MSEde)
3df: SELENOMETHIONINE (MSEdf)
3dg: SELENOMETHIONINE (MSEdg)
3dh: SELENOMETHIONINE (MSEdh)
3di: SELENOMETHIONINE (MSEdi)
3dj: SELENOMETHIONINE (MSEdj)
3dk: SELENOMETHIONINE (MSEdk)
3dl: SELENOMETHIONINE (MSEdl)
3dm: SELENOMETHIONINE (MSEdm)
3dn: SELENOMETHIONINE (MSEdn)
3do: SELENOMETHIONINE (MSEdo)
3dp: SELENOMETHIONINE (MSEdp)
3dq: SELENOMETHIONINE (MSEdq)
3dr: SELENOMETHIONINE (MSEdr)
3ds: SELENOMETHIONINE (MSEds)
3dt: SELENOMETHIONINE (MSEdt)
3du: SELENOMETHIONINE (MSEdu)
3dv: SELENOMETHIONINE (MSEdv)
3dw: SELENOMETHIONINE (MSEdw)
3dx: SELENOMETHIONINE (MSEdx)
3dy: SELENOMETHIONINE (MSEdy)
3dz: SELENOMETHIONINE (MSEdz)
3e: SELENOMETHIONINE (MSEe)
3ea: SELENOMETHIONINE (MSEea)
3eb: SELENOMETHIONINE (MSEeb)
3ec: SELENOMETHIONINE (MSEec)
3ed: SELENOMETHIONINE (MSEed)
3ee: SELENOMETHIONINE (MSEee)
3ef: SELENOMETHIONINE (MSEef)
3eg: SELENOMETHIONINE (MSEeg)
3eh: SELENOMETHIONINE (MSEeh)
3ei: SELENOMETHIONINE (MSEei)
3ej: SELENOMETHIONINE (MSEej)
3ek: SELENOMETHIONINE (MSEek)
3el: SELENOMETHIONINE (MSEel)
3em: SELENOMETHIONINE (MSEem)
3en: SELENOMETHIONINE (MSEen)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
3y: SELENOMETHIONINE (MSEy)
3z: SELENOMETHIONINE (MSEz)
4a: NITRATE ION (NO3a)
4b: NITRATE ION (NO3b)
4c: NITRATE ION (NO3c)
4d: NITRATE ION (NO3d)
4e: NITRATE ION (NO3e)
4f: NITRATE ION (NO3f)
4g: NITRATE ION (NO3g)
4h: NITRATE ION (NO3h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CSD
16
Mod. Amino Acid
3-SULFINOALANINE
2
EDO
61
Ligand/Ion
1,2-ETHANEDIOL
3
MSE
144
Mod. Amino Acid
SELENOMETHIONINE
4
NO3
8
Ligand/Ion
NITRATE ION
[
close Hetero Component info
]
Sites
(69, 69)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR F:195 , ARG F:208 , NO3 F:214 , NO3 F:215 , HOH F:434
BINDING SITE FOR RESIDUE NO3 F 213
02
AC2
SOFTWARE
PRO F:196 , NO3 F:213 , HOH F:389 , HOH F:434
BINDING SITE FOR RESIDUE NO3 F 214
03
AC3
SOFTWARE
ALA F:191 , TYR F:195 , ARG F:208 , NO3 F:213 , HOH F:422 , HOH F:427
BINDING SITE FOR RESIDUE NO3 F 215
04
AC4
SOFTWARE
GLN F:-1 , GLY F:0 , MSE F:1 , GLY F:30 , LYS F:32
BINDING SITE FOR RESIDUE NO3 F 216
05
AC5
SOFTWARE
TYR G:195 , ARG G:208 , NO3 G:214 , HOH G:329 , HOH G:434 , TYR J:195 , PRO J:196 , ARG J:208
BINDING SITE FOR RESIDUE NO3 G 213
06
AC6
SOFTWARE
ALA G:191 , TYR G:195 , ARG G:208 , NO3 G:213 , HOH G:426 , HOH G:427 , ALA J:191 , TYR J:195 , ARG J:208
BINDING SITE FOR RESIDUE NO3 G 214
07
AC7
SOFTWARE
GLY I:0 , GLY I:30 , LYS I:32
BINDING SITE FOR RESIDUE NO3 I 213
08
AC8
SOFTWARE
TYR O:49 , ARG P:147 , ILE P:150 , MSE P:151 , ASN P:154 , HOH P:221
BINDING SITE FOR RESIDUE NO3 P 213
09
AC9
SOFTWARE
PHE A:89 , ASN A:106 , ARG A:155 , LEU A:158 , ARG A:159 , HOH A:245
BINDING SITE FOR RESIDUE EDO A 213
10
BC1
SOFTWARE
ASP A:163 , CYS A:166 , HOH A:252
BINDING SITE FOR RESIDUE EDO A 214
11
BC2
SOFTWARE
LYS A:174 , THR A:175 , VAL A:176 , GLN A:178 , HOH A:356 , HOH A:383 , LYS H:174
BINDING SITE FOR RESIDUE EDO A 215
12
BC3
SOFTWARE
ASP A:168 , LEU A:170 , THR A:171 , LYS A:174 , HOH A:315 , HOH A:400 , THR H:175
BINDING SITE FOR RESIDUE EDO A 216
13
BC4
SOFTWARE
ARG A:147 , ILE A:150 , MSE A:151 , ASN A:154 , TYR B:49 , HOH B:250 , HOH B:278
BINDING SITE FOR RESIDUE EDO A 217
14
BC5
SOFTWARE
ASN A:61 , SER A:62
BINDING SITE FOR RESIDUE EDO A 218
15
BC6
SOFTWARE
LYS A:32 , VAL A:33 , LEU A:193 , HOH A:249 , HOH A:260
BINDING SITE FOR RESIDUE EDO A 219
16
BC7
SOFTWARE
ASP A:95 , ASN A:126 , HOH A:298 , ASP C:95 , LYS D:117
BINDING SITE FOR RESIDUE EDO A 220
17
BC8
SOFTWARE
HOH A:281 , PHE B:89 , ASN B:106 , ARG B:155 , LEU B:158 , ARG B:159
BINDING SITE FOR RESIDUE EDO B 213
18
BC9
SOFTWARE
PHE B:100 , LYS B:133 , HOH B:281 , ASP D:129
BINDING SITE FOR RESIDUE EDO B 214
19
CC1
SOFTWARE
ASP B:95 , HOH B:327 , HOH B:355 , HOH B:398 , HOH B:419 , ILE D:94
BINDING SITE FOR RESIDUE EDO B 215
20
CC2
SOFTWARE
ARG B:167 , THR B:171 , EDO B:217 , HOH B:280 , ARG G:167 , THR G:171 , HOH G:292
BINDING SITE FOR RESIDUE EDO B 216
21
CC3
SOFTWARE
ARG A:167 , ARG B:167 , EDO B:216 , HOH B:297 , HOH B:401 , HOH B:421 , ARG G:167 , ARG H:167 , HOH H:369
BINDING SITE FOR RESIDUE EDO B 217
22
CC4
SOFTWARE
ASP B:177 , GLN B:178 , HOH B:261 , HOH B:379 , HOH G:235 , EDO J:215
BINDING SITE FOR RESIDUE EDO B 218
23
CC5
SOFTWARE
PHE C:89 , ASN C:106 , ARG C:155 , ARG C:159 , HOH C:301
BINDING SITE FOR RESIDUE EDO C 213
24
CC6
SOFTWARE
ILE C:94 , HOH C:253 , HOH C:259 , HOH C:270
BINDING SITE FOR RESIDUE EDO C 214
25
CC7
SOFTWARE
HOH C:316 , ASN D:106 , ARG D:155 , ARG D:159
BINDING SITE FOR RESIDUE EDO D 213
26
CC8
SOFTWARE
ARG C:167 , ARG D:167 , ASP D:168 , THR D:171 , HOH E:336 , ARG F:167
BINDING SITE FOR RESIDUE EDO D 214
27
CC9
SOFTWARE
PHE E:89 , ASN E:106 , ARG E:155 , ARG E:159 , HOH E:249 , HOH E:420 , HOH E:442
BINDING SITE FOR RESIDUE EDO E 213
28
DC1
SOFTWARE
PRO E:86 , LYS E:162 , ASP E:163 , CYS E:166 , HOH E:260 , HOH E:356
BINDING SITE FOR RESIDUE EDO E 214
29
DC2
SOFTWARE
ARG E:147 , ILE E:150 , MSE E:151 , ASN E:154 , HOH E:230 , HOH E:268 , TYR F:49 , EDO F:219 , HOH F:232
BINDING SITE FOR RESIDUE EDO E 215
30
DC3
SOFTWARE
LYS E:14 , SER E:116 , PHE E:119
BINDING SITE FOR RESIDUE EDO E 216
31
DC4
SOFTWARE
PRO E:144 , ARG E:145 , GLU E:146
BINDING SITE FOR RESIDUE EDO E 217
32
DC5
SOFTWARE
PHE F:100 , LYS F:133 , LEU H:125 , HOH H:251
BINDING SITE FOR RESIDUE EDO F 217
33
DC6
SOFTWARE
PHE F:89 , ASN F:106 , ARG F:155 , LEU F:158 , ARG F:159 , HOH F:241
BINDING SITE FOR RESIDUE EDO F 218
34
DC7
SOFTWARE
ILE E:105 , MSE E:151 , EDO E:215 , SER F:10 , CSD F:72 , GLY F:73 , HOH F:257 , TRP G:121
BINDING SITE FOR RESIDUE EDO F 219
35
DC8
SOFTWARE
SER F:10 , GLN F:11 , ALA F:12 , ALA F:13 , LYS F:14
BINDING SITE FOR RESIDUE EDO F 220
36
DC9
SOFTWARE
PHE F:34 , GLU F:192 , ASN F:197 , HOH F:234 , HOH F:307 , HOH F:428
BINDING SITE FOR RESIDUE EDO F 221
37
EC1
SOFTWARE
MSE F:51 , LEU F:180 , HOH F:416
BINDING SITE FOR RESIDUE EDO F 222
38
EC2
SOFTWARE
PHE G:89 , ASN G:106 , ARG G:155 , ARG G:159 , HOH G:229
BINDING SITE FOR RESIDUE EDO G 215
39
EC3
SOFTWARE
HOH E:322 , PHE G:100 , LYS G:133 , HOH G:402
BINDING SITE FOR RESIDUE EDO G 216
40
EC4
SOFTWARE
TRP F:121 , SER G:10 , CSD G:72 , GLY G:73 , HOH G:413 , MSE H:151
BINDING SITE FOR RESIDUE EDO G 217
41
EC5
SOFTWARE
ILE E:94 , ASN E:126 , HOH E:279 , ASP G:95 , HOH G:282 , HOH G:441
BINDING SITE FOR RESIDUE EDO G 218
42
EC6
SOFTWARE
GLU G:192 , ASN G:197
BINDING SITE FOR RESIDUE EDO G 219
43
EC7
SOFTWARE
LEU E:125 , HOH E:292 , HOH G:383
BINDING SITE FOR RESIDUE EDO G 220
44
EC8
SOFTWARE
LYS B:174 , THR G:175 , VAL G:176 , ASP G:177 , HOH G:288
BINDING SITE FOR RESIDUE EDO G 221
45
EC9
SOFTWARE
PHE H:89 , ASN H:106 , ARG H:155 , LEU H:158 , ARG H:159 , HOH H:276 , HOH H:363
BINDING SITE FOR RESIDUE EDO H 213
46
FC1
SOFTWARE
PRO H:86 , ASP H:163 , CYS H:166 , HOH H:295
BINDING SITE FOR RESIDUE EDO H 214
47
FC2
SOFTWARE
ILE F:94 , ASN F:126 , ASP H:95 , HOH H:315 , HOH H:343 , HOH H:347
BINDING SITE FOR RESIDUE EDO H 215
48
FC3
SOFTWARE
TRP E:121 , ARG G:147 , GLU H:8 , SER H:10 , CSD H:72 , GLY H:73
BINDING SITE FOR RESIDUE EDO H 216
49
FC4
SOFTWARE
ASP H:177 , GLN H:178 , ASP H:179 , HOH H:301 , HOH H:323 , HOH H:366
BINDING SITE FOR RESIDUE EDO H 217
50
FC5
SOFTWARE
TYR F:143 , PHE H:119 , GLY H:120 , TRP H:121 , ALA H:122 , GLU H:124
BINDING SITE FOR RESIDUE EDO H 218
51
FC6
SOFTWARE
PHE I:89 , ASN I:106 , ARG I:155 , LEU I:158 , ARG I:159 , HOH I:251
BINDING SITE FOR RESIDUE EDO I 214
52
FC7
SOFTWARE
PHE I:100 , LYS I:133 , HOH I:225 , HOH I:256 , ASP L:129
BINDING SITE FOR RESIDUE EDO I 215
53
FC8
SOFTWARE
LYS I:117 , GLY I:118 , HOH I:323 , HOH I:398 , GLY K:118 , HOH K:364
BINDING SITE FOR RESIDUE EDO I 216
54
FC9
SOFTWARE
LYS I:2 , PRO I:196 , ASN I:197 , HOH I:258 , HOH I:315
BINDING SITE FOR RESIDUE EDO I 217
55
GC1
SOFTWARE
HOH I:292 , PHE J:89 , ASN J:106 , ARG J:155 , ARG J:159
BINDING SITE FOR RESIDUE EDO J 213
56
GC2
SOFTWARE
ASP J:168 , LEU J:170 , THR J:171 , LYS J:174 , ARG O:167
BINDING SITE FOR RESIDUE EDO J 214
57
GC3
SOFTWARE
EDO B:218 , ASN G:205 , TYR G:206 , HOH G:232 , LYS J:189 , GLU J:192
BINDING SITE FOR RESIDUE EDO J 215
58
GC4
SOFTWARE
PHE K:89 , ASN K:106 , ARG K:155 , ARG K:159 , HOH K:236
BINDING SITE FOR RESIDUE EDO K 213
59
GC5
SOFTWARE
HOH J:329 , PHE K:100 , LYS K:133 , HOH K:315
BINDING SITE FOR RESIDUE EDO K 214
60
GC6
SOFTWARE
ASN J:126 , ASP K:95 , HOH K:334 , HOH K:349
BINDING SITE FOR RESIDUE EDO K 215
61
GC7
SOFTWARE
PHE L:89 , ASN L:106 , ARG L:155 , ARG L:159 , HOH L:220
BINDING SITE FOR RESIDUE EDO L 213
62
GC8
SOFTWARE
PHE M:89 , ASN M:106 , ARG M:155 , LEU M:158 , ARG M:159 , HOH M:228
BINDING SITE FOR RESIDUE EDO M 213
63
GC9
SOFTWARE
LYS M:32 , VAL M:33 , PHE M:34 , EDO M:215 , HOH M:268
BINDING SITE FOR RESIDUE EDO M 214
64
HC1
SOFTWARE
LYS M:32 , PHE M:34 , GLU M:192 , ASN M:197 , EDO M:214
BINDING SITE FOR RESIDUE EDO M 215
65
HC2
SOFTWARE
THR L:175 , ASP M:168 , LEU M:170 , THR M:171 , LYS M:174
BINDING SITE FOR RESIDUE EDO M 216
66
HC3
SOFTWARE
PHE N:89 , ASN N:106 , ARG N:155 , ARG N:159 , HOH N:227
BINDING SITE FOR RESIDUE EDO N 213
67
HC4
SOFTWARE
PHE N:100 , LYS N:133 , HOH N:248 , HOH N:254 , LEU O:125 , ASP O:129
BINDING SITE FOR RESIDUE EDO N 214
68
HC5
SOFTWARE
LYS M:117 , ASP N:95 , HOH N:297 , ILE O:94 , ASN O:126
BINDING SITE FOR RESIDUE EDO N 215
69
HC6
SOFTWARE
PHE P:89 , ASN P:106 , ARG P:155 , LEU P:158 , ARG P:159 , HOH P:224
BINDING SITE FOR RESIDUE EDO P 214
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SAPs(SNPs)/Variants
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CATH Domains
(1, 16)
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1a: CATH_3c5yA00 (A:0-210)
1b: CATH_3c5yD00 (D:0-210)
1c: CATH_3c5yM00 (M:0-211)
1d: CATH_3c5yN00 (N:0-211)
1e: CATH_3c5yF00 (F:-1-211)
1f: CATH_3c5yL00 (L:0-212)
1g: CATH_3c5yH00 (H:-3-210)
1h: CATH_3c5yE00 (E:-2-212)
1i: CATH_3c5yG00 (G:0-210)
1j: CATH_3c5yO00 (O:0-210)
1k: CATH_3c5yP00 (P:0-210)
1l: CATH_3c5yB00 (B:0-211)
1m: CATH_3c5yC00 (C:0-211)
1n: CATH_3c5yI00 (I:0-211)
1o: CATH_3c5yJ00 (J:0-211)
1p: CATH_3c5yK00 (K:0-211)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Ribose 5-phosphate Isomerase B; Chain: A,
(13)
Homologous Superfamily
:
[code=3.40.1400.10, no name defined]
(13)
Novosphingobium aromaticivorans dsm 12444. Organism_taxid: 279238. Strain: dsm 12444.
(1)
1a
3c5yA00
A:0-210
1b
3c5yD00
D:0-210
1c
3c5yM00
M:0-211
1d
3c5yN00
N:0-211
1e
3c5yF00
F:-1-211
1f
3c5yL00
L:0-212
1g
3c5yH00
H:-3-210
1h
3c5yE00
E:-2-212
1i
3c5yG00
G:0-210
1j
3c5yO00
O:0-210
1k
3c5yP00
P:0-210
1l
3c5yB00
B:0-211
1m
3c5yC00
C:0-211
1n
3c5yI00
I:0-211
1o
3c5yJ00
J:0-211
1p
3c5yK00
K:0-211
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