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3C5S
Asym. Unit
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Asym.Unit (145 KB)
Biol.Unit 1 (71 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MONOCLONAL FAB F22-4 SPECIFIC FOR SHIGELLA FLEXNERI 2A O-AG
Authors
:
F. A. Saul, B. Vulliez-Le-Normand, G. A. Bentley
Date
:
01 Feb 08 (Deposition) - 01 Jul 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Antibody, O-Antigen, Lps, Shigella Flexneri, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Vulliez-Le Normand, F. A. Saul, A. Phalipon, F. Belot, C. Guerreiro, L. A. Mulard, G. A. Bentley
Structures Of Synthetic O-Antigen Fragments From Serotype 2A Shigella Flexneri In Complex With A Protective Monoclonal Antibody
Proc. Natl. Acad. Sci. Usa V. 105 9976 2008
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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PROSITE Patterns/Profiles
(1, 2)
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1: IG_MHC (A:192-198,C:192-198)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IG_MHC
PS00290
Immunoglobulins and major histocompatibility complex proteins signature.
IGKC_MOUSE
84-90
2
A:192-198
C:192-198
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Exons
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d3c5sa1 (A:1-107)
1b: SCOP_d3c5sc1 (C:1-107)
2a: SCOP_d3c5sa2 (A:108-213)
2b: SCOP_d3c5sc2 (C:108-212)
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Class
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All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
automated matches
(864)
Protein domain
:
automated matches
(864)
Mouse (Mus musculus) [TaxId: 10090]
(360)
1a
d3c5sa1
A:1-107
1b
d3c5sc1
C:1-107
Family
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C1 set domains (antibody constant domain-like)
(3013)
Protein domain
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automated matches
(652)
Mouse (Mus musculus) [TaxId: 10090]
(309)
2a
d3c5sa2
A:108-213
2b
d3c5sc2
C:108-212
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CATH Domains
(1, 8)
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all CATH domains
1a: CATH_3c5sA02 (A:109-213)
1b: CATH_3c5sB02 (B:114-215)
1c: CATH_3c5sD02 (D:114-215)
1d: CATH_3c5sA01 (A:1-108)
1e: CATH_3c5sC01 (C:1-108)
1f: CATH_3c5sB01 (B:1-113)
1g: CATH_3c5sD01 (D:1-113)
1h: CATH_3c5sC02 (C:109-212)
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Class
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Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Mouse (Mus musculus)
(152)
1a
3c5sA02
A:109-213
1b
3c5sB02
B:114-215
1c
3c5sD02
D:114-215
1d
3c5sA01
A:1-108
1e
3c5sC01
C:1-108
1f
3c5sB01
B:1-113
1g
3c5sD01
D:1-113
1h
3c5sC02
C:109-212
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Asym.Unit (145 KB)
Header - Asym.Unit
Biol.Unit 1 (71 KB)
Header - Biol.Unit 1
Biol.Unit 2 (73 KB)
Header - Biol.Unit 2
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