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3C4H
Asym. Unit
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Asym.Unit (65 KB)
Biol.Unit 1 (61 KB)
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(1)
Title
:
HUMAN POLY(ADP-RIBOSE) POLYMERASE 3, CATALYTIC FRAGMENT IN COMPLEX WITH AN INHIBITOR DR2313
Authors
:
L. Lehtio, R. Collins, C. H. Arrowsmith, H. Berglund, C. Bountra, R. Bus L. G. Dahlgren, A. M. Edwards, S. Flodin, A. Flores, S. Graslund, M. Ham M. D. Herman, A. Johansson, I. Johansson, A. Kallas, T. Karlberg, T. Ko M. Moche, M. E. Nilsson, P. Nordlund, T. Nyman, C. Persson, J. Sagemark L. Svensson, A. G. Thorsell, L. Tresaugues, S. Van Den Berg, M. Welin J. Weigelt, Structural Genomics Consortium (Sgc)
Date
:
30 Jan 08 (Deposition) - 12 Feb 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Enzyme-Inhibitor Complex, Catalytic Fragment, Structural Genomics, Structural Genomics Consortium, Sgc, Glycosyltransferase, Nad, Nucleus, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Lehtio, A. S. Jemth, R. Collins, O. Loseva, A. Johansson, N. Markova M. Hammarstrom, A. Flores, L. Holmberg-Schiavone, J. Weigelt, T. Helleday, H. Schuler, T. Karlberg
Structural Basis For Inhibitor Specificity In Human Poly(Adp-Ribose) Polymerase-3.
J. Med. Chem. V. 52 3108 2009
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: DIMETHYL SULFOXIDE (DMSa)
2a: 2-METHYL-3,5,7,8-TETRAHYDRO-4H-THI... (DRLa)
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No.
Name
Count
Type
Full Name
1
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
2
DRL
1
Ligand/Ion
2-METHYL-3,5,7,8-TETRAHYDRO-4H-THIOPYRANO[4,3-D]PYRIMIDIN-4-ONE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:384 , GLY A:385 , TYR A:414 , PHE A:415 , SER A:422 , TYR A:425 , GLU A:514
BINDING SITE FOR RESIDUE DRL A 601
2
AC2
SOFTWARE
GLY A:398 , LEU A:399 , ARG A:400 , MET A:402
BINDING SITE FOR RESIDUE DMS A 700
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_056644 (Q269R, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_056644
Q
269
R
PARP3_HUMAN
Polymorphism
323870
A
Q
269
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PARP_ALPHA_HD (A:182-300)
2: PARP_CATALYTIC (A:313-532)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PARP_ALPHA_HD
PS51060
PARP alpha-helical domain profile.
PARP3_HUMAN
182-300
1
A:182-300
2
PARP_CATALYTIC
PS51059
PARP catalytic domain profile.
PARP3_HUMAN
313-533
1
A:313-532
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3c4ha1 (A:176-321)
2a: SCOP_d3c4ha2 (A:322-532)
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Protein Domains
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Domain of poly(ADP-ribose) polymerase
(38)
Superfamily
:
Domain of poly(ADP-ribose) polymerase
(38)
Family
:
automated matches
(22)
Protein domain
:
automated matches
(22)
Human (Homo sapiens) [TaxId: 9606]
(22)
1a
d3c4ha1
A:176-321
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ADP-ribosylation
(157)
Superfamily
:
ADP-ribosylation
(157)
Family
:
automated matches
(42)
Protein domain
:
automated matches
(42)
Human (Homo sapiens) [TaxId: 9606]
(20)
2a
d3c4ha2
A:322-532
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3c4hA01 (A:176-322)
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Organisms
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Poly(ADP-ribose) Polymerase; domain 1
(21)
Homologous Superfamily
:
Poly(ADP-ribose) Polymerase, domain 1
(21)
Human (Homo sapiens)
(12)
1a
3c4hA01
A:176-322
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (65 KB)
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