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3BZE
Biol. Unit 4
Info
Asym.Unit (267 KB)
Biol.Unit 1 (69 KB)
Biol.Unit 2 (69 KB)
Biol.Unit 3 (67 KB)
Biol.Unit 4 (69 KB)
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(1)
Title
:
THE HUMAN NON-CLASSICAL MAJOR HISTOCOMPATIBILITY COMPLEX MOLECULE HLA-E
Authors
:
H. L. Hoare, L. C. Sullivan, L. K. Ely, T. Beddoe, K. N. Henderson, J. Lin, C. S. Clements, H. H. Reid, A. G. Brooks, J. Rossjohn
Date
:
17 Jan 08 (Deposition) - 29 Apr 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,P,Q,R,S
Biol. Unit 1: A,B,P (1x)
Biol. Unit 2: C,D,Q (1x)
Biol. Unit 3: E,F,R (1x)
Biol. Unit 4: G,H,S (1x)
Keywords
:
Mhc Fold, Transmembrane, Disease Mutation, Glycation, Glycoprotein, Immune Response, Immunoglobulin Domain, Mhc I, Pyrrolidone Carboxylic Acid, Secreted, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. L. Hoare, L. C. Sullivan, C. S. Clements, L. K. Ely, T. Beddoe, K. N. Henderson, J. Lin, H. H. Reid, A. G. Brooks, J. Rossjohn
Subtle Changes In Peptide Conformation Profoundly Affect Recognition Of The Non-Classical Mhc Class I Molecule Hla-E By The Cd94-Nkg2 Natural Killer Cell Receptors
J. Mol. Biol. V. 377 1297 2008
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_059510 (N77K, chain G, )
2: VAR_004395 (G83R, chain G, )
3: VAR_016651 (R107G, chain G, )
4: VAR_016652 (R157G, chain G, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_059510
N
98
K
HLAE_HUMAN
Polymorphism
1059510
G
N
77
K
2
UniProt
VAR_004395
G
104
R
HLAE_HUMAN
Polymorphism
---
G
G
83
R
3
UniProt
VAR_016651
R
128
G
HLAE_HUMAN
Polymorphism
1264457
G
R
107
G
4
UniProt
VAR_016652
R
178
G
HLAE_HUMAN
Polymorphism
41562314
G
R
157
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: IG_MHC (G:257-263)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IG_MHC
PS00290
Immunoglobulins and major histocompatibility complex proteins signature.
B2MG_HUMAN
98-104
1
-
-
-
H:78-84
HLAE_HUMAN
278-284
1
-
-
-
G:257-263
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 12)
Info
All SCOP Domains
1a: SCOP_d3bzeb_ (B:)
1b: SCOP_d3bzed_ (D:)
1c: SCOP_d3bzef_ (F:)
1d: SCOP_d3bzeh_ (H:)
2a: SCOP_d3bzea1 (A:182-274)
2b: SCOP_d3bzec1 (C:182-274)
2c: SCOP_d3bzee1 (E:182-274)
2d: SCOP_d3bzeg1 (G:182-274)
3a: SCOP_d3bzea2 (A:2-181)
3b: SCOP_d3bzec2 (C:2-181)
3c: SCOP_d3bzee2 (E:2-181)
3d: SCOP_d3bzeg2 (G:2-181)
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(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
beta2-microglobulin
(530)
Human (Homo sapiens) [TaxId: 9606]
(350)
1a
d3bzeb_
B:
1b
d3bzed_
D:
1c
d3bzef_
F:
1d
d3bzeh_
H:
Protein domain
:
Class I MHC, alpha-3 domain
(293)
Human (Homo sapiens) [TaxId: 9606]
(187)
2a
d3bzea1
A:182-274
2b
d3bzec1
C:182-274
2c
d3bzee1
E:182-274
2d
d3bzeg1
G:182-274
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
MHC antigen-recognition domain
(585)
Superfamily
:
MHC antigen-recognition domain
(585)
Family
:
MHC antigen-recognition domain
(533)
Protein domain
:
Class I MHC, alpha-1 and alpha-2 domains
(294)
Human (Homo sapiens), HLA-E [TaxId: 9606]
(8)
3a
d3bzea2
A:2-181
3b
d3bzec2
C:2-181
3c
d3bzee2
E:2-181
3d
d3bzeg2
G:2-181
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_3bzeA01 (A:2-181)
1b: CATH_3bzeC01 (C:2-181)
1c: CATH_3bzeE01 (E:2-181)
1d: CATH_3bzeG01 (G:2-181)
2a: CATH_3bzeB00 (B:0-99)
2b: CATH_3bzeA02 (A:182-272)
2c: CATH_3bzeC02 (C:182-272)
2d: CATH_3bzeG02 (G:182-272)
2e: CATH_3bzeE02 (E:182-272)
2f: CATH_3bzeD00 (D:0-99)
2g: CATH_3bzeF00 (F:0-99)
2h: CATH_3bzeH00 (H:0-99)
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1
(402)
Homologous Superfamily
:
Murine Class I Major Histocompatibility Complex, H2-DB, subunit A, domain 1
(400)
Human (Homo sapiens)
(249)
1a
3bzeA01
A:2-181
1b
3bzeC01
C:2-181
1c
3bzeE01
E:2-181
1d
3bzeG01
G:2-181
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Human (Homo sapiens)
(912)
2a
3bzeB00
B:0-99
2b
3bzeA02
A:182-272
2c
3bzeC02
C:182-272
2d
3bzeG02
G:182-272
2e
3bzeE02
E:182-272
2f
3bzeD00
D:0-99
2g
3bzeF00
F:0-99
2h
3bzeH00
H:0-99
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (267 KB)
Header - Asym.Unit
Biol.Unit 1 (69 KB)
Header - Biol.Unit 1
Biol.Unit 2 (69 KB)
Header - Biol.Unit 2
Biol.Unit 3 (67 KB)
Header - Biol.Unit 3
Biol.Unit 4 (69 KB)
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