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3BUX
Biol. Unit 5
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Asym.Unit (121 KB)
Biol.Unit 1 (4 KB)
Biol.Unit 2 (58 KB)
Biol.Unit 3 (4 KB)
Biol.Unit 4 (59 KB)
Biol.Unit 5 (60 KB)
Biol.Unit 6 (60 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF C-CBL-TKB DOMAIN COMPLEXED WITH ITS BINDING MOTIF IN C-MET
Authors
:
C. Ng, R. A. Jackson, J. P. Buschdorf, Q. Sun, G. R. Guy, J. Sivaraman
Date
:
03 Jan 08 (Deposition) - 26 Feb 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.35
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: A,B (1x)
Biol. Unit 6: C,D (1x)
Keywords
:
Cbl, Tkb, Ligase, Signal Transduction, Proto-Oncogene, Complex, Atp-Binding, Glycoprotein, Kinase, Membrane, Nucleotide-Binding, Phosphoprotein, Receptor, Transferase, Transmembrane, Tyrosine-Protein Kinase, Calcium, Cytoplasm, Metal-Binding, Sh2 Domain, Ubl Conjugation Pathway, Zinc, Zinc-Finger, Ligase/Signaling Protein Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
C. Ng, R. A. Jackson, J. P. Buschdorf, Q. Sun, G. R. Guy, J. Sivaraman
Structural Basis For A Novel Intrapeptidyl H-Bond And Reverse Binding Of C-Cbl-Tkb Domain Substrates
Embo J. V. 27 804 2008
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: O-PHOSPHOTYROSINE (PTRa)
1b: O-PHOSPHOTYROSINE (PTRb)
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No.
Name
Count
Type
Full Name
1
PTR
1
Mod. Amino Acid
O-PHOSPHOTYROSINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
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(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_071040 (K287R, chain B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_071040
K
287
R
CBL_HUMAN
Unclassified
---
B
K
287
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CBL_PTB (B:47-351)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CBL_PTB
PS51506
Cbl-type phosphotyrosine-binding (Cbl-PTB) domain profile.
CBL_HUMAN
47-351
1
B:47-351
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 6)
Info
All SCOP Domains
1a: SCOP_d3buxb1 (B:178-263)
1b: SCOP_d3buxd1 (D:178-263)
2a: SCOP_d3buxb2 (B:48-177)
2b: SCOP_d3buxd2 (D:48-177)
3a: SCOP_d3buxb3 (B:264-351)
3b: SCOP_d3buxd3 (D:264-351)
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Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
EF-hand modules in multidomain proteins
(29)
Protein domain
:
Cbl
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d3buxb1
B:178-263
1b
d3buxd1
D:178-263
Fold
:
N-cbl like
(37)
Superfamily
:
N-terminal domain of cbl (N-cbl)
(12)
Family
:
N-terminal domain of cbl (N-cbl)
(10)
Protein domain
:
N-terminal domain of cbl (N-cbl)
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
2a
d3buxb2
B:48-177
2b
d3buxd2
D:48-177
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
SH2-like
(260)
Superfamily
:
SH2 domain
(260)
Family
:
SH2 domain
(225)
Protein domain
:
Cbl
(10)
Human (Homo sapiens) [TaxId: 9606]
(10)
3a
d3buxb3
B:264-351
3b
d3buxd3
D:264-351
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_3buxB03 (B:265-350)
1b: CATH_3buxD03 (D:265-350)
2a: CATH_3buxB02 (B:176-264)
2b: CATH_3buxD02 (D:176-264)
3a: CATH_3buxB01 (B:47-175)
3b: CATH_3buxD01 (D:47-175)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
SHC Adaptor Protein
(206)
Homologous Superfamily
:
SHC Adaptor Protein
(206)
[unclassified]
(7)
1a
3buxB03
B:265-350
1b
3buxD03
D:265-350
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
[unclassified]
(6)
2a
3buxB02
B:176-264
2b
3buxD02
D:176-264
Architecture
:
Up-down Bundle
(3216)
Topology
:
Transcription Elongation Factor S-II; Chain A
(14)
Homologous Superfamily
:
[code=1.20.930.20, no name defined]
(9)
[unclassified]
(4)
3a
3buxB01
B:47-175
3b
3buxD01
D:47-175
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (121 KB)
Header - Asym.Unit
Biol.Unit 1 (4 KB)
Header - Biol.Unit 1
Biol.Unit 2 (58 KB)
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Biol.Unit 3 (4 KB)
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Biol.Unit 4 (59 KB)
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Biol.Unit 5 (60 KB)
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