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3BU8
Asym. Unit
Info
Asym.Unit (81 KB)
Biol.Unit 1 (151 KB)
Biol.Unit 2 (76 KB)
Biol.Unit 3 (40 KB)
Biol.Unit 4 (39 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TRF2 TRFH DOMAIN AND TIN2 PEPTIDE COMPLEX
Authors
:
Y. Chen, Y. Yang, M. Van Overbeek, J. R. Donigian, P. Baciu, T. De Lange, M. Lei
Date
:
02 Jan 08 (Deposition) - 19 Feb 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (2x)
Biol. Unit 2: A,B,C,D (1x)
Biol. Unit 3: A,C (1x)
Biol. Unit 4: B,D (1x)
Keywords
:
Trf2 Trfh Domain Trf2 Dimerization Domain Tin2 Peptide, Alternative Splicing, Cell Cycle, Chromosomal Protein, Dna- Binding, Nucleus, Phosphoprotein, Telomere, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Chen, Y. Yang, M. Van Overbeek, J. R. Donigian, P. Baciu, T. De Lange, M. Lei
A Shared Docking Motif In Trf1 And Trf2 Used For Differential Recruitment Of Telomeric Proteins.
Science V. 319 1092 2008
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(8, 15)
Info
All Exons
Exon 1.1 (- | B:43-43)
Exon 1.2 (A:44-75 | B:43-75)
Exon 1.3 (A:75-118 | B:75-118)
Exon 1.4 (A:119-147 | B:119-147)
Exon 1.5 (A:148-196 | B:148-196)
Exon 1.6 (A:197-232 | B:197-232)
Exon 1.7 (A:232-247 | B:232-249)
Exon 2.6a (C:257-271 (gaps) | D:257-266 (gaps...)
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All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5
06: Boundary 1.5/1.6
07: Boundary 1.6/1.7
08: Boundary 1.7/1.8
09: Boundary 2.5/2.6a
10: Boundary 2.6a/2.6c
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000254942
1
ENSE00001141462
chr16:
69419859-69419496
364
TERF2_HUMAN
1-85
85
1
-
B:43-43
-
1
1.2
ENST00000254942
2
ENSE00000904627
chr16:
69419389-69419294
96
TERF2_HUMAN
85-117
33
2
A:44-75
B:43-75
32
33
1.3
ENST00000254942
3
ENSE00000904625
chr16:
69418613-69418483
131
TERF2_HUMAN
117-160
44
2
A:75-118
B:75-118
44
44
1.4
ENST00000254942
4
ENSE00000904623
chr16:
69406258-69406172
87
TERF2_HUMAN
161-189
29
2
A:119-147
B:119-147
29
29
1.5
ENST00000254942
5
ENSE00000904620
chr16:
69404532-69404386
147
TERF2_HUMAN
190-238
49
2
A:148-196
B:148-196
49
49
1.6
ENST00000254942
6
ENSE00000904618
chr16:
69402385-69402279
107
TERF2_HUMAN
239-274
36
2
A:197-232
B:197-232
36
36
1.7
ENST00000254942
7
ENSE00000904616
chr16:
69401102-69400710
393
TERF2_HUMAN
274-405
132
2
A:232-247
B:232-249
16
18
1.8
ENST00000254942
8
ENSE00000904614
chr16:
69395392-69395307
86
TERF2_HUMAN
405-434
30
0
-
-
1.9
ENST00000254942
9
ENSE00000904612
chr16:
69391464-69391421
44
TERF2_HUMAN
434-448
15
0
-
-
1.10
ENST00000254942
10
ENSE00001141451
chr16:
69390959-69389464
1496
TERF2_HUMAN
449-500
52
0
-
-
2.1
ENST00000267415
1
ENSE00001193210
chr14:
24711880-24711347
534
TINF2_HUMAN
1-64
64
0
-
-
2.2
ENST00000267415
2
ENSE00000654387
chr14:
24711200-24711096
105
TINF2_HUMAN
65-99
35
0
-
-
2.3
ENST00000267415
3
ENSE00001288582
chr14:
24710982-24710881
102
TINF2_HUMAN
100-133
34
0
-
-
2.4
ENST00000267415
4
ENSE00000586400
chr14:
24710517-24710410
108
TINF2_HUMAN
134-169
36
0
-
-
2.5
ENST00000267415
5
ENSE00000654380
chr14:
24710322-24710226
97
TINF2_HUMAN
170-202
33
0
-
-
2.6a
ENST00000267415
6a
ENSE00001288575
chr14:
24710081-24709625
457
TINF2_HUMAN
202-354
153
2
C:257-271 (gaps)
D:257-266 (gaps)
26
21
2.6c
ENST00000267415
6c
ENSE00001193206
chr14:
24709536-24709469
68
TINF2_HUMAN
354-377
24
0
-
-
2.6d
ENST00000267415
6d
ENSE00001193174
chr14:
24709361-24709270
92
TINF2_HUMAN
377-407
31
0
-
-
2.6e
ENST00000267415
6e
ENSE00001348153
chr14:
24709137-24708853
285
TINF2_HUMAN
408-451
44
0
-
-
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3bu8a_ (A:)
1b: SCOP_d3bu8b_ (B:)
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(
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Class
:
All alpha proteins
(14657)
Fold
:
Telomeric repeat binding factor (TRF) dimerisation domain
(5)
Superfamily
:
Telomeric repeat binding factor (TRF) dimerisation domain
(5)
Family
:
Telomeric repeat binding factor (TRF) dimerisation domain
(5)
Protein domain
:
TRF2
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3bu8a_
A:
1b
d3bu8b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3bu8A00 (A:44-247)
1b: CATH_3bu8B00 (B:43-249)
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Organisms
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
Telomeric repeat binding factor (TRF) dimerisation domain
(6)
Human (Homo sapiens)
(6)
1a
3bu8A00
A:44-247
1b
3bu8B00
B:43-249
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Asym.Unit (81 KB)
Header - Asym.Unit
Biol.Unit 1 (151 KB)
Header - Biol.Unit 1
Biol.Unit 2 (76 KB)
Header - Biol.Unit 2
Biol.Unit 3 (40 KB)
Header - Biol.Unit 3
Biol.Unit 4 (39 KB)
Header - Biol.Unit 4
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