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3BTN
Asym. Unit
Info
Asym.Unit (133 KB)
Biol.Unit 1 (65 KB)
Biol.Unit 2 (65 KB)
Biol.Unit 3 (127 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ANTIZYME INHIBITOR, AN ORNITHINE DECARBOXYLASE HOMOLOGOUS PROTEIN
Authors
:
O. Dym, T. Unger, S. Albeck, C. Kahana, Israel Structural Proteomics Center (Ispc)
Date
:
30 Dec 07 (Deposition) - 15 Apr 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Tim-Like A/B Barrel Domain And A Sheet Domain, Structural Genomics, Israel Structural Proteomics Center, Ispc, Polyamine Biosynthesis, Biosynthetic Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Albeck, O. Dym, T. Unger, Z. Snapir, Z. Bercovich, C. Kahana
Crystallographic And Biochemical Studies Revealing The Structural Basis For Antizyme Inhibitor Function.
Protein Sci. V. 17 793 2008
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ODR_DC_2_2 (A:222-239,B:222-239)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ODR_DC_2_2
PS00879
Orn/DAP/Arg decarboxylases family 2 signature 2.
AZIN1_MOUSE
222-239
2
A:222-239
B:222-239
[
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Exons
(10, 20)
Info
All Exons
Exon 1.6 (A:8-34 | B:8-34)
Exon 1.7b (A:35-92 | B:35-92)
Exon 1.8 (A:93-150 | B:93-150)
Exon 1.9b (A:150-195 (gaps) | B:150-195 (gaps...)
Exon 1.10 (A:195-222 | B:195-222)
Exon 1.11 (A:223-247 | B:223-247)
Exon 1.12a (A:248-293 | B:248-292)
Exon 1.13a (A:311-340 (gaps) | B:311-340 (gaps...)
Exon 1.14b (A:341-412 (gaps) | B:347-412)
Exon 1.15b (A:412-435 | B:412-434)
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All Exon Boundaries
01: Boundary 1.5/1.6
02: Boundary 1.6/1.7b
03: Boundary 1.7b/1.8
04: Boundary 1.8/1.9b
05: Boundary 1.9b/1.10
06: Boundary 1.10/1.11
07: Boundary 1.11/1.12a
08: Boundary 1.12a/1.13a
09: Boundary 1.13a/1.14b
10: Boundary 1.14b/1.15b
11: Boundary 1.15b/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENSMUST00000110329
1b
ENSMUSE00000683549
chr15:
38449018-38448664
355
AZIN1_MOUSE
-
0
0
-
-
1.4a
ENSMUST00000110329
4a
ENSMUSE00000361050
chr15:
38444364-38444228
137
AZIN1_MOUSE
-
0
0
-
-
1.5
ENSMUST00000110329
5
ENSMUSE00000683548
chr15:
38437101-38436942
160
AZIN1_MOUSE
-
0
0
-
-
1.6
ENSMUST00000110329
6
ENSMUSE00000412170
chr15:
38431355-38431159
197
AZIN1_MOUSE
1-34
34
2
A:8-34
B:8-34
27
27
1.7b
ENSMUST00000110329
7b
ENSMUSE00000231222
chr15:
38430226-38430053
174
AZIN1_MOUSE
35-92
58
2
A:35-92
B:35-92
58
58
1.8
ENSMUST00000110329
8
ENSMUSE00000897288
chr15:
38428596-38428424
173
AZIN1_MOUSE
93-150
58
2
A:93-150
B:93-150
58
58
1.9b
ENSMUST00000110329
9b
ENSMUSE00000231211
chr15:
38427153-38427019
135
AZIN1_MOUSE
150-195
46
2
A:150-195 (gaps)
B:150-195 (gaps)
46
46
1.10
ENSMUST00000110329
10
ENSMUSE00000231204
chr15:
38425109-38425028
82
AZIN1_MOUSE
195-222
28
2
A:195-222
B:195-222
28
28
1.11
ENSMUST00000110329
11
ENSMUSE00000231198
chr15:
38424121-38424047
75
AZIN1_MOUSE
223-247
25
2
A:223-247
B:223-247
25
25
1.12a
ENSMUST00000110329
12a
ENSMUSE00000231192
chr15:
38423391-38423229
163
AZIN1_MOUSE
248-302
55
2
A:248-293
B:248-292
46
45
1.13a
ENSMUST00000110329
13a
ENSMUSE00000231187
chr15:
38422114-38421999
116
AZIN1_MOUSE
302-340
39
2
A:311-340 (gaps)
B:311-340 (gaps)
30
30
1.14b
ENSMUST00000110329
14b
ENSMUSE00000231179
chr15:
38421445-38421231
215
AZIN1_MOUSE
341-412
72
2
A:341-412 (gaps)
B:347-412
72
66
1.15b
ENSMUST00000110329
15b
ENSMUSE00000683547
chr15:
38420227-38417993
2235
AZIN1_MOUSE
412-448
37
2
A:412-435
B:412-434
24
23
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SCOP Domains
(0, 0)
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_3btnA02 (A:46-276)
1b: CATH_3btnB02 (B:46-276)
2a: CATH_3btnA01 (A:35-45,A:277-407)
2b: CATH_3btnB01 (B:35-45,B:277-407)
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(
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Alanine racemase
(53)
House mouse (Mus musculus)
(2)
1a
3btnA02
A:46-276
1b
3btnB02
B:46-276
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Lyase, Ornithine Decarboxylase; Chain A, domain 1
(47)
Homologous Superfamily
:
Lyase, Ornithine Decarboxylase; Chain A, domain 1
(47)
House mouse (Mus musculus)
(2)
2a
3btnA01
A:35-45,A:277-407
2b
3btnB01
B:35-45,B:277-407
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Show PDB file:
Asym.Unit (133 KB)
Header - Asym.Unit
Biol.Unit 1 (65 KB)
Header - Biol.Unit 1
Biol.Unit 2 (65 KB)
Header - Biol.Unit 2
Biol.Unit 3 (127 KB)
Header - Biol.Unit 3
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