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3B9R
Biol. Unit 1
Info
Asym.Unit (672 KB)
Biol.Unit 1 (333 KB)
Biol.Unit 2 (336 KB)
Biol.Unit 3 (663 KB)
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(1)
Title
:
SERCA CA2+-ATPASE E2 ALUMINIUM FLUORIDE COMPLEX WITHOUT THAPSIGARGIN
Authors
:
C. Olesen, M. Picard, A. M. L. Winther, J. P. Morth, J. V. Moller, P. Nissen
Date
:
06 Nov 07 (Deposition) - 18 Dec 07 (Release) - 19 May 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Calcium Pump, Membrane Protein, Transition State, Aluminium Fluoride, Dephosphorylation, Alternative Splicing, Atp- Binding, Calcium, Calcium Transport, Endoplasmic Reticulum, Hydrolase, Ion Transport, Magnesium, Metal-Binding, Nucleotide-Binding, Phosphorylation, Sarcoplasmic Reticulum, Transmembrane, Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
C. Olesen, M. Picard, A. M. L. Winther, C. Gyrup, J. P. Morth, C. Oxvig, J. V. Moller, P. Nissen
The Structural Basis Of Calcium Transport By The Calcium Pump
Nature V. 450 1036 2007
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: PHOSPHOMETHYLPHOSPHONIC ACID ADENY... (ACPa)
1b: PHOSPHOMETHYLPHOSPHONIC ACID ADENY... (ACPb)
2a: TETRAFLUOROALUMINATE ION (ALFa)
2b: TETRAFLUOROALUMINATE ION (ALFb)
3a: POTASSIUM ION (Ka)
3b: POTASSIUM ION (Kb)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACP
1
Ligand/Ion
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
2
ALF
1
Ligand/Ion
TETRAFLUOROALUMINATE ION
3
K
-1
Ligand/Ion
POTASSIUM ION
4
MG
-1
Ligand/Ion
MAGNESIUM ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
4: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:181 , GLY A:182 , ASP A:351 , LYS A:352 , THR A:353 , ILE A:624 , THR A:625 , GLY A:626 , LYS A:684 , ASN A:706 , MG A:996 , HOH A:999 , HOH A:1001
BINDING SITE FOR RESIDUE ALF A 995
2
AC3
SOFTWARE
ASP A:351 , THR A:353 , ASP A:703 , ALF A:995 , HOH A:999 , HOH A:1000
BINDING SITE FOR RESIDUE MG A 996
3
AC4
SOFTWARE
LEU A:711 , LYS A:712 , ALA A:714 , GLU A:732
BINDING SITE FOR RESIDUE K A 997
4
AC7
SOFTWARE
LYS A:205 , PHE A:487 , MET A:494 , LYS A:515 , GLY A:516 , ARG A:560 , LEU A:562
BINDING SITE FOR RESIDUE ACP A 998
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ATPASE_E1_E2 (A:351-357)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ATPASE_E1_E2
PS00154
E1-E2 ATPases phosphorylation site.
AT2A1_RABIT
351-357
1
A:351-357
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(4, 8)
Info
All SCOP Domains
1a: SCOP_d3b9ra1 (A:125-239)
1b: SCOP_d3b9rb1 (B:125-239)
2a: SCOP_d3b9ra3 (A:361-599)
2b: SCOP_d3b9rb3 (B:361-599)
3a: SCOP_d3b9ra2 (A:344-360,A:600-750)
3b: SCOP_d3b9rb2 (B:344-360,B:600-750)
4a: SCOP_d3b9ra4 (A:1-124,A:240-343,A:751-994)
4b: SCOP_d3b9rb4 (B:1-124,B:240-343,B:751-994)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
Calcium ATPase, transduction domain A
(37)
Family
:
Calcium ATPase, transduction domain A
(37)
Protein domain
:
Calcium ATPase, transduction domain A
(37)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(37)
1a
d3b9ra1
A:125-239
1b
d3b9rb1
B:125-239
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Metal cation-transporting ATPase, ATP-binding domain N
(45)
Superfamily
:
Metal cation-transporting ATPase, ATP-binding domain N
(45)
Family
:
Metal cation-transporting ATPase, ATP-binding domain N
(45)
Protein domain
:
Calcium ATPase
(37)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(37)
2a
d3b9ra3
A:361-599
2b
d3b9rb3
B:361-599
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
HAD-like
(349)
Superfamily
:
HAD-like
(349)
Family
:
Meta-cation ATPase, catalytic domain P
(38)
Protein domain
:
Calcium ATPase, catalytic domain P
(37)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(37)
3a
d3b9ra2
A:344-360,A:600-750
3b
d3b9rb2
B:344-360,B:600-750
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Calcium ATPase, transmembrane domain M
(37)
Superfamily
:
Calcium ATPase, transmembrane domain M
(37)
Family
:
Calcium ATPase, transmembrane domain M
(37)
Protein domain
:
Calcium ATPase, transmembrane domain M
(37)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(37)
4a
d3b9ra4
A:1-124,A:240-343,A:751-994
4b
d3b9rb4
B:1-124,B:240-343,B:751-994
[
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CATH Domains
(4, 8)
Info
all CATH domains
1a: CATH_3b9rA04 (A:359-602)
1b: CATH_3b9rB04 (B:359-602)
2a: CATH_3b9rA03 (A:346-358,A:603-745)
2b: CATH_3b9rB03 (B:346-358,B:603-745)
3a: CATH_3b9rA02 (A:55-112,A:241-345,A:746-994)
3b: CATH_3b9rB02 (B:55-112,B:241-345,B:746-994)
4a: CATH_3b9rA01 (A:12-54,A:113-240)
4b: CATH_3b9rB01 (B:12-54,B:113-240)
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Organisms
(
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Calcium-transporting ATPase, cytoplasmic domain N
(43)
Homologous Superfamily
:
Calcium-transporting ATPase, cytoplasmic domain N
(43)
Rabbit (Oryctolagus cuniculus)
(31)
1a
3b9rA04
A:359-602
1b
3b9rB04
B:359-602
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1000, no name defined]
(211)
Rabbit (Oryctolagus cuniculus)
(31)
2a
3b9rA03
A:346-358,A:603-745
2b
3b9rB03
B:346-358,B:603-745
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Calcium-transporting ATPase, transmembrane domain
(36)
Homologous Superfamily
:
Calcium-transporting ATPase, transmembrane domain
(36)
Rabbit (Oryctolagus cuniculus)
(31)
3a
3b9rA02
A:55-112,A:241-345,A:746-994
3b
3b9rB02
B:55-112,B:241-345,B:746-994
Class
:
Mainly Beta
(13760)
Architecture
:
Distorted Sandwich
(506)
Topology
:
Calcium-transporting ATPase, cytoplasmic transduction domain A
(35)
Homologous Superfamily
:
Calcium-transporting ATPase, cytoplasmic transduction domain A
(35)
Rabbit (Oryctolagus cuniculus)
(31)
4a
3b9rA01
A:12-54,A:113-240
4b
3b9rB01
B:12-54,B:113-240
[
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (672 KB)
Header - Asym.Unit
Biol.Unit 1 (333 KB)
Header - Biol.Unit 1
Biol.Unit 2 (336 KB)
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Biol.Unit 3 (663 KB)
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