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3B3M
Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (150 KB)
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(1)
Title
:
STRUCTURE OF NEURONAL NOS HEME DOMAIN IN COMPLEX WITH A INHIBITOR (+-)-3-{CIS-4'-[(6"-AMINOPYRIDIN-2"-YL) METHYL]PYRROLIDIN-3'-YLAMINO}PROPAN-1-OL
Authors
:
J. Igarashi, H. Li, T. L. Poulos
Date
:
22 Oct 07 (Deposition) - 15 Jul 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nitric Oxide Synthase, Heme Enzyme, Inhibitor, Alternative Splicing, Calmodulin-Binding, Cell Projection, Fad, Fmn, Iron, Membrane, Metal-Binding, Nadp, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ji, B. Z. Stanton, J. Igarashi, H. Li, P. Martasek, L. J. Roman, T. L. Poulos, R. B. Silverman
Minimal Pharmacophoric Elements And Fragment Hopping, An Approach Directed At Molecular Diversity And Isozyme Selectivity. Design Of Selective Neuronal Nitric Oxide Synthase Inhibitors.
J. Am. Chem. Soc. V. 130 3900 2008
(for further references see the
PDB file header
)
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Hetero Components
(5, 9)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Ba)
2b: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Bb)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4a: 3-({(3S,4S)-4-[(6-AMINOPYRIDIN-2-Y... (JI1a)
4b: 3-({(3S,4S)-4-[(6-AMINOPYRIDIN-2-Y... (JI1b)
5a: ZINC ION (ZNa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
H4B
2
Ligand/Ion
5,6,7,8-TETRAHYDROBIOPTERIN
3
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
JI1
2
Ligand/Ion
3-({(3S,4S)-4-[(6-AMINOPYRIDIN-2-YL)METHYL]PYRROLIDIN-3-YL}AMINO)PROPAN-1-OL
5
ZN
1
Ligand/Ion
ZINC ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:420 , TRP A:587 , SER A:657 , HOH A:1054 , HOH A:1122
BINDING SITE FOR RESIDUE ACT A 860
2
AC2
SOFTWARE
TRP B:587 , HOH B:1201 , HOH B:1282 , HOH B:1338
BINDING SITE FOR RESIDUE ACT B 860
3
AC3
SOFTWARE
CYS A:326 , CYS A:331 , CYS B:326 , CYS B:331
BINDING SITE FOR RESIDUE ZN A 900
4
AC4
SOFTWARE
TRP A:409 , ARG A:414 , CYS A:415 , SER A:457 , PHE A:584 , SER A:585 , TRP A:587 , MET A:589 , GLU A:592 , TRP A:678 , PHE A:704 , TYR A:706 , HOH A:902 , HOH A:919 , HOH A:944 , HOH A:1000 , HOH A:1093
BINDING SITE FOR RESIDUE HEM A 750
5
AC5
SOFTWARE
SER A:334 , MET A:336 , ARG A:596 , TRP A:678 , HOH A:906 , HOH A:919 , HOH A:927 , HOH A:1033 , HOH A:1124 , TRP B:676 , PHE B:691 , HIS B:692 , GLN B:693 , GLU B:694
BINDING SITE FOR RESIDUE H4B A 760
6
AC6
SOFTWARE
GLN A:478 , TRP A:587 , GLU A:592 , TRP A:678 , HOH A:903 , HOH A:1093
BINDING SITE FOR RESIDUE JI1 A 800
7
AC7
SOFTWARE
TRP B:409 , ARG B:414 , CYS B:415 , SER B:457 , PHE B:584 , SER B:585 , TRP B:587 , GLU B:592 , TRP B:678 , PHE B:704 , TYR B:706 , HOH B:1108 , HOH B:1122 , HOH B:1124 , HOH B:1139 , HOH B:1169
BINDING SITE FOR RESIDUE HEM B 750
8
AC8
SOFTWARE
TRP A:676 , PHE A:691 , HIS A:692 , GLU A:694 , SER B:334 , ARG B:596 , TRP B:678 , HOH B:1083 , HOH B:1117 , HOH B:1124 , HOH B:1183 , HOH B:1314
BINDING SITE FOR RESIDUE H4B B 760
9
AC9
SOFTWARE
GLN B:478 , TRP B:587 , GLU B:592 , HOH B:1080 , HOH B:1124 , HOH B:1139 , HOH B:1254
BINDING SITE FOR RESIDUE JI1 B 800
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:414-421,B:414-421)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS1_RAT
414-421
2
A:414-421
B:414-421
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3b3ma_ (A:)
1b: SCOP_d3b3mb_ (B:)
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Protein Domains
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(
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
Nitric oxide (NO) synthase oxygenase domain
(298)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(154)
1a
d3b3ma_
A:
1b
d3b3mb_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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