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3B34
Asym. Unit
Info
Asym.Unit (347 KB)
Biol.Unit 1 (341 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF E. COLI AMINOPEPTIDASE N IN COMPLEX WITH PHENYLALANINE
Authors
:
A. Addlagatta
Date
:
19 Oct 07 (Deposition) - 06 May 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Aminopeptidase N, Protease, Hydrolase, Thermolysin, Phenylalanine, Membrane, Metal-Binding, Metalloprotease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Addlagatta, L. Gay, B. W. Matthews
Structural Basis For The Unusual Specificity Of Escherichia Coli Aminopeptidase N.
Biochemistry V. 47 5303 2008
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close entry info
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Hetero Components
(5, 14)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
2a: MALONATE ION (MLIa)
2b: MALONATE ION (MLIb)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
4a: PHENYLALANINE (PHEa)
5a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
8
Ligand/Ion
GLYCEROL
2
MLI
2
Ligand/Ion
MALONATE ION
3
NA
2
Ligand/Ion
SODIUM ION
4
PHE
1
Mod. Amino Acid
PHENYLALANINE
5
ZN
1
Ligand/Ion
ZINC ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:297 , HIS A:301 , GLU A:320 , PHE A:900
BINDING SITE FOR RESIDUE ZN A 950
02
AC2
SOFTWARE
SER A:332 , ASP A:333 , GLY A:335 , HOH A:1166 , HOH A:1268 , HOH A:1710
BINDING SITE FOR RESIDUE NA A 951
03
AC3
SOFTWARE
ASP A:452 , HOH A:1282 , HOH A:1817 , HOH A:1840 , HOH A:1844
BINDING SITE FOR RESIDUE NA A 952
04
AC4
SOFTWARE
GLN A:119 , GLU A:121 , MET A:260 , ALA A:262 , MET A:263 , GLU A:264 , HIS A:297 , GLU A:298 , HIS A:301 , LYS A:319 , GLU A:320 , TYR A:376 , TYR A:381
BINDING SITE FOR RESIDUE PHE A 900
05
AC5
SOFTWARE
MET A:260 , GLY A:261 , LYS A:274 , TYR A:275 , ARG A:783 , ARG A:825 , HOH A:1764
BINDING SITE FOR RESIDUE MLI A 980
06
AC6
SOFTWARE
ALA A:531 , LEU A:532 , LEU A:542 , TRP A:546 , ASP A:566 , SER A:570 , HOH A:1630 , HOH A:1898
BINDING SITE FOR RESIDUE MLI A 982
07
AC7
SOFTWARE
ALA A:531 , LEU A:532 , TRP A:546 , SER A:563 , ASP A:566 , ALA A:567 , SER A:570
BINDING SITE FOR RESIDUE GOL A 970
08
AC8
SOFTWARE
TYR A:376 , LEU A:378 , GLU A:382 , HOH A:1705 , HOH A:2087
BINDING SITE FOR RESIDUE GOL A 971
09
AC9
SOFTWARE
ALA A:262 , ARG A:293 , HIS A:297 , GLU A:298 , TYR A:381 , PHE A:900 , HOH A:1377 , HOH A:1422 , HOH A:1764
BINDING SITE FOR RESIDUE GOL A 972
10
BC1
SOFTWARE
SER A:63 , TRP A:71 , THR A:72 , TRP A:74 , ARG A:669 , GLU A:671 , HOH A:1099 , HOH A:1723
BINDING SITE FOR RESIDUE GOL A 973
11
BC2
SOFTWARE
LEU A:61 , TRP A:74 , ARG A:669 , GLU A:671 , HOH A:1615 , HOH A:1768
BINDING SITE FOR RESIDUE GOL A 974
12
BC3
SOFTWARE
MET A:260 , GLY A:261 , LYS A:274 , TYR A:275 , ARG A:783 , ARG A:825 , HOH A:1764
BINDING SITE FOR RESIDUE GOL A 975
13
BC4
SOFTWARE
GLU A:292 , HIS A:672 , HOH A:1316
BINDING SITE FOR RESIDUE GOL A 976
14
BC5
SOFTWARE
ARG A:438 , SER A:441 , GLN A:442 , GLN A:475 , GLU A:477 , GLN A:479 , HOH A:2033 , HOH A:2071
BINDING SITE FOR RESIDUE GOL A 977
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:294-303)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
AMPN_ECOLI
294-303
1
A:294-303
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Exons
(0, 0)
Info
All Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (347 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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