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3B0V
Biol. Unit 2
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Asym.Unit (172 KB)
Biol.Unit 1 (84 KB)
Biol.Unit 2 (84 KB)
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(1)
Title
:
TRNA-DIHYDROURIDINE SYNTHASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH TRNA
Authors
:
F. Yu, Y. Tanaka, K. Yamashita, A. Nakamura, M. Yao, I. Tanaka
Date
:
14 Jun 11 (Deposition) - 14 Dec 11 (Release) - 21 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.51
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Tim Barrel, Oxidoreductase-Rna Complex
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Reference
:
F. Yu, Y. Tanaka, K. Yamashita, T. Suzuki, A. Nakamura, N. Hirano, T. Suzuki, M. Yao, I. Tanaka
Molecular Basis Of Dihydrouridine Formation On Trna
Proc. Natl. Acad. Sci. Usa V. 108 19593 2011
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: FLAVIN MONONUCLEOTIDE (FMNa)
1b: FLAVIN MONONUCLEOTIDE (FMNb)
2a: 5,6-DIHYDROURIDINE-5'-MONOPHOSPHAT... (H2Ua)
2b: 5,6-DIHYDROURIDINE-5'-MONOPHOSPHAT... (H2Ub)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
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No.
Name
Count
Type
Full Name
1
FMN
1
Ligand/Ion
FLAVIN MONONUCLEOTIDE
2
H2U
1
Mod. Nucleotide
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
3
MSE
10
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(1, 1)
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1: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
H2U B:20 , ALA D:9 , PRO D:10 , MSE D:11 , VAL D:12 , MSE D:36 , GLN D:63 , ASN D:90 , LYS D:132 , HIS D:164 , ARG D:178 , ASN D:203 , GLY D:204 , GLY D:205 , GLY D:225 , ARG D:226
BINDING SITE FOR RESIDUE FMN D 400
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
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1: UPF0034 (D:87-105)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
UPF0034
PS01136
Uncharacterized protein family UPF0034 signature.
DUSAL_THET8
87-105
1
-
D:87-105
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Exons
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Asymmetric Unit 1
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Asym.Unit (172 KB)
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