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3AZ8
Biol. Unit 1
Info
Asym.Unit (558 KB)
Biol.Unit 1 (145 KB)
Biol.Unit 2 (142 KB)
Biol.Unit 3 (144 KB)
Biol.Unit 4 (142 KB)
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(1)
Title
:
BETA-HYDROXYACYL-ACYL CARRIER PROTEIN DEHYDRATASE (FABZ) FROM PLASMODIUM FALCIPARUM IN COMPLEX WITH NAS21
Authors
:
K. Maity, B. S. Venkata, N. Kapoor, N. Surolia, A. Surolia, K. Suguna
Date
:
20 May 11 (Deposition) - 29 Feb 12 (Release) - 29 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.10
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: G,H,I,J,K,L (1x)
Biol. Unit 3: M,N,O,P,Q,R (1x)
Biol. Unit 4: S,T,U,V,W,X (1x)
Keywords
:
Fabz, Plasmodium Falciparum, Beta-Hydroxyacyl Acyl Carrier Protein Dehydratase, Hot Dog Fold, Lyase, Lyase-Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Maity, B. S. Venkata, N. Kapoor, N. Surolia, A. Surolia, K. Suguna
Structural Basis For The Functional And Inhibitory Mechanisms Of Beta-Hydroxyacyl-Acyl Carrier Protein Dehydratase (Fabz) Of Plasmodium Falciparum
J. Struct. Biol. V. 176 238 2011
[
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Hetero Components
(4, 16)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
1n: CHLORIDE ION (CLn)
1o: CHLORIDE ION (CLo)
1p: CHLORIDE ION (CLp)
1q: CHLORIDE ION (CLq)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3aa: DI(HYDROXYETHYL)ETHER (PEGaa)
3ab: DI(HYDROXYETHYL)ETHER (PEGab)
3ac: DI(HYDROXYETHYL)ETHER (PEGac)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
3c: DI(HYDROXYETHYL)ETHER (PEGc)
3d: DI(HYDROXYETHYL)ETHER (PEGd)
3e: DI(HYDROXYETHYL)ETHER (PEGe)
3f: DI(HYDROXYETHYL)ETHER (PEGf)
3g: DI(HYDROXYETHYL)ETHER (PEGg)
3h: DI(HYDROXYETHYL)ETHER (PEGh)
3i: DI(HYDROXYETHYL)ETHER (PEGi)
3j: DI(HYDROXYETHYL)ETHER (PEGj)
3k: DI(HYDROXYETHYL)ETHER (PEGk)
3l: DI(HYDROXYETHYL)ETHER (PEGl)
3m: DI(HYDROXYETHYL)ETHER (PEGm)
3n: DI(HYDROXYETHYL)ETHER (PEGn)
3o: DI(HYDROXYETHYL)ETHER (PEGo)
3p: DI(HYDROXYETHYL)ETHER (PEGp)
3q: DI(HYDROXYETHYL)ETHER (PEGq)
3r: DI(HYDROXYETHYL)ETHER (PEGr)
3s: DI(HYDROXYETHYL)ETHER (PEGs)
3t: DI(HYDROXYETHYL)ETHER (PEGt)
3u: DI(HYDROXYETHYL)ETHER (PEGu)
3v: DI(HYDROXYETHYL)ETHER (PEGv)
3w: DI(HYDROXYETHYL)ETHER (PEGw)
3x: DI(HYDROXYETHYL)ETHER (PEGx)
3y: DI(HYDROXYETHYL)ETHER (PEGy)
3z: DI(HYDROXYETHYL)ETHER (PEGz)
4a: PHOSPHATE ION (PO4a)
5a: 4,4,4-TRIFLUORO-1-(4-NITROPHENYL)B... (S21a)
5b: 4,4,4-TRIFLUORO-1-(4-NITROPHENYL)B... (S21b)
5c: 4,4,4-TRIFLUORO-1-(4-NITROPHENYL)B... (S21c)
5d: 4,4,4-TRIFLUORO-1-(4-NITROPHENYL)B... (S21d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
GOL
3
Ligand/Ion
GLYCEROL
3
PEG
10
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PO4
1
Ligand/Ion
PHOSPHATE ION
5
S21
2
Ligand/Ion
4,4,4-TRIFLUORO-1-(4-NITROPHENYL)BUTANE-1,3-DIONE
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: BC6 (SOFTWARE)
05: BC7 (SOFTWARE)
06: BC9 (SOFTWARE)
07: CC1 (SOFTWARE)
08: CC2 (SOFTWARE)
09: CC3 (SOFTWARE)
10: CC6 (SOFTWARE)
11: CC7 (SOFTWARE)
12: DC7 (SOFTWARE)
13: DC8 (SOFTWARE)
14: DC9 (SOFTWARE)
15: EC5 (SOFTWARE)
16: EC6 (SOFTWARE)
17: EC7 (SOFTWARE)
18: EC8 (SOFTWARE)
19: FC4 (SOFTWARE)
20: FC5 (SOFTWARE)
21: FC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:101 , PHE A:129 , PRO B:101 , PRO B:128 , PHE B:129
BINDING SITE FOR RESIDUE GOL A 1
02
AC2
SOFTWARE
ASN A:126 , PRO C:101 , PRO D:101 , PRO D:128 , PHE D:129 , HOH D:284
BINDING SITE FOR RESIDUE GOL D 2
03
AC3
SOFTWARE
PHE E:102 , PHE E:129 , PRO F:101 , PRO F:128 , PHE F:129
BINDING SITE FOR RESIDUE GOL F 3
04
BC6
SOFTWARE
HIS C:133 , ILE C:139 , GLY C:142 , TRP C:179 , LYS C:181 , HIS D:98 , GLU D:147 , PHE D:169 , LEU D:170 , PHE D:171 , HOH D:232
BINDING SITE FOR RESIDUE S21 D 231
05
BC7
SOFTWARE
HIS E:133 , ILE E:139 , MET E:140 , PRO E:141 , GLY E:142 , GLN E:145 , PRO E:182 , VAL E:183 , HIS F:98 , GLU F:147 , ALA F:150 , GLN F:151 , PHE F:169 , LEU F:170 , PHE F:171
BINDING SITE FOR RESIDUE S21 F 231
06
BC9
SOFTWARE
HIS E:98 , GLU E:147 , ALA E:150 , PHE E:169 , PHE E:171 , HIS F:133
BINDING SITE FOR RESIDUE PO4 E 1
07
CC1
SOFTWARE
THR C:188 , THR F:190
BINDING SITE FOR RESIDUE PEG C 1
08
CC2
SOFTWARE
SER F:86 , LYS F:107
BINDING SITE FOR RESIDUE PEG F 2
09
CC3
SOFTWARE
TYR B:212
BINDING SITE FOR RESIDUE PEG B 3
10
CC6
SOFTWARE
ASN F:194 , ASP Q:162 , LYS Q:165
BINDING SITE FOR RESIDUE PEG Q 7
11
CC7
SOFTWARE
ILE D:118 , TYR D:212 , HOH S:57 , TYR S:110 , GLN S:192
BINDING SITE FOR RESIDUE PEG S 8
12
DC7
SOFTWARE
SER E:160 , ASP E:161
BINDING SITE FOR RESIDUE PEG E 17
13
DC8
SOFTWARE
SER A:86 , ASP A:88 , LYS A:107
BINDING SITE FOR RESIDUE PEG A 18
14
DC9
SOFTWARE
GLN D:192 , ILE S:118 , TYR S:212
BINDING SITE FOR RESIDUE PEG S 19
15
EC5
SOFTWARE
PEG F:25 , ASN F:114
BINDING SITE FOR RESIDUE PEG F 24
16
EC6
SOFTWARE
PEG F:24 , ASN F:114 , SER F:160 , ASP F:161
BINDING SITE FOR RESIDUE PEG F 25
17
EC7
SOFTWARE
PEG A:27 , LEU A:158 , ASP A:162 , LYS A:165
BINDING SITE FOR RESIDUE PEG A 26
18
EC8
SOFTWARE
PEG A:26 , LYS A:159
BINDING SITE FOR RESIDUE PEG A 27
19
FC4
SOFTWARE
HIS A:98 , GLU A:147
BINDING SITE FOR RESIDUE CL A 3
20
FC5
SOFTWARE
HIS A:133 , HIS B:98 , GLU B:147
BINDING SITE FOR RESIDUE CL B 4
21
FC6
SOFTWARE
HIS C:98 , GLU C:147
BINDING SITE FOR RESIDUE CL C 5
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 24)
Info
All SCOP Domains
1a: SCOP_d3az8a_ (A:)
1b: SCOP_d3az8u_ (U:)
1c: SCOP_d3az8v_ (V:)
1d: SCOP_d3az8w_ (W:)
1e: SCOP_d3az8x_ (X:)
1f: SCOP_d3az8b_ (B:)
1g: SCOP_d3az8c_ (C:)
1h: SCOP_d3az8d_ (D:)
1i: SCOP_d3az8e_ (E:)
1j: SCOP_d3az8f_ (F:)
1k: SCOP_d3az8g_ (G:)
1l: SCOP_d3az8h_ (H:)
1m: SCOP_d3az8i_ (I:)
1n: SCOP_d3az8j_ (J:)
1o: SCOP_d3az8k_ (K:)
1p: SCOP_d3az8l_ (L:)
1q: SCOP_d3az8m_ (M:)
1r: SCOP_d3az8n_ (N:)
1s: SCOP_d3az8o_ (O:)
1t: SCOP_d3az8p_ (P:)
1u: SCOP_d3az8q_ (Q:)
1v: SCOP_d3az8r_ (R:)
1w: SCOP_d3az8s_ (S:)
1x: SCOP_d3az8t_ (T:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Thioesterase/thiol ester dehydrase-isomerase
(151)
Superfamily
:
Thioesterase/thiol ester dehydrase-isomerase
(151)
Family
:
FabZ-like
(24)
Protein domain
:
(3R)-hydroxymyristoyl ACP dehydrase FabZ
(24)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(8)
1a
d3az8a_
A:
1b
d3az8u_
U:
1c
d3az8v_
V:
1d
d3az8w_
W:
1e
d3az8x_
X:
1f
d3az8b_
B:
1g
d3az8c_
C:
1h
d3az8d_
D:
1i
d3az8e_
E:
1j
d3az8f_
F:
1k
d3az8g_
G:
1l
d3az8h_
H:
1m
d3az8i_
I:
1n
d3az8j_
J:
1o
d3az8k_
K:
1p
d3az8l_
L:
1q
d3az8m_
M:
1r
d3az8n_
N:
1s
d3az8o_
O:
1t
d3az8p_
P:
1u
d3az8q_
Q:
1v
d3az8r_
R:
1w
d3az8s_
S:
1x
d3az8t_
T:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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Atom Selection
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Protein & NOT Site
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Chain A
Chain B
Chain C
Chain D
Chain E
Chain F
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (558 KB)
Header - Asym.Unit
Biol.Unit 1 (145 KB)
Header - Biol.Unit 1
Biol.Unit 2 (142 KB)
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Biol.Unit 3 (144 KB)
Header - Biol.Unit 3
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