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3AV8
Biol. Unit 1
Info
Asym.Unit (75 KB)
Biol.Unit 1 (19 KB)
Biol.Unit 2 (19 KB)
Biol.Unit 3 (19 KB)
Biol.Unit 4 (19 KB)
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(1)
Title
:
REFINED STRUCTURE OF PLANT-TYPE [2FE-2S] FERREDOXIN I FROM APHANOTHECE SACRUM AT 1.46 A RESOLUTION
Authors
:
H. Kameda, K. Hirabayashi, K. Wada, K. Fukuyama
Date
:
28 Feb 11 (Deposition) - 11 Jan 12 (Release) - 11 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.46
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Beta-Grasp, Redox Protein, Electron Transport
(Keyword Search:
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Reference
:
H. Kameda, K. Hirabayashi, K. Wada, K. Fukuyama
Mapping Of Protein-Protein Interaction Sites In The Plant-Type [2Fe-2S] Ferredoxin.
Plos One V. 6 21947 2011
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: FE2/S2 (INORGANIC) CLUSTER (FESa)
1b: FE2/S2 (INORGANIC) CLUSTER (FESb)
1c: FE2/S2 (INORGANIC) CLUSTER (FESc)
1d: FE2/S2 (INORGANIC) CLUSTER (FESd)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
2
SO4
-1
Ligand/Ion
SULFATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:38 , CYS A:39 , ARG A:40 , GLY A:42 , ALA A:43 , CYS A:44 , CYS A:47 , LEU A:76 , CYS A:78
BINDING SITE FOR RESIDUE FES A 98
2
AC5
SOFTWARE
PRO A:55 , GLY A:84 , ASP A:85 , HOH A:184 , HOH A:268 , ALA C:1 , ASP C:20 , HOH C:151 , HOH C:263
BINDING SITE FOR RESIDUE SO4 C 99
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: 2FE2S_FER_2 (A:3-94)
2: 2FE2S_FER_1 (A:39-47)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
2FE2S_FER_2
PS51085
2Fe-2S ferredoxin-type iron-sulfur binding domain profile.
FER_APHSA
4-94
1
A:3-94
-
-
-
2
2FE2S_FER_1
PS00197
2Fe-2S ferredoxin-type iron-sulfur binding region signature.
FER_APHSA
40-48
1
A:39-47
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3av8a_ (A:)
1b: SCOP_d3av8b_ (B:)
1c: SCOP_d3av8c_ (C:)
1d: SCOP_d3av8d_ (D:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
2Fe-2S ferredoxin-like
(174)
Family
:
2Fe-2S ferredoxin-related
(74)
Protein domain
:
automated matches
(14)
Aphanothece sacrum [TaxId: 1122]
(1)
1a
d3av8a_
A:
1b
d3av8b_
B:
1c
d3av8c_
C:
1d
d3av8d_
D:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (75 KB)
Header - Asym.Unit
Biol.Unit 1 (19 KB)
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Biol.Unit 2 (19 KB)
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Biol.Unit 3 (19 KB)
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Biol.Unit 4 (19 KB)
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