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3AN2
Asym. Unit
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Asym.Unit (220 KB)
Biol.Unit 1 (212 KB)
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(1)
Title
:
THE STRUCTURE OF THE CENTROMERIC NUCLEOSOME CONTAINING CENP-A
Authors
:
H. Tachiwana, W. Kagawa, T. Shiga, K. Saito, A. Osakabe, Y. Hayashi-Tak Y. Park, H. Kimura, H. Kurumizaka
Date
:
27 Aug 10 (Deposition) - 20 Jul 11 (Release) - 25 Jul 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J (1x)
Keywords
:
Histone Fold, Dna Binding, Nucleus, Structural Protein-Dna Complex
(Keyword Search:
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Reference
:
H. Tachiwana, W. Kagawa, T. Shiga, A. Osakabe, Y. Miya, K. Saito, Y. Hayashi-Takanaka, T. Oda, M. Sato, S. -Y. Park, H. Kimura, H. Kurumizaka
Crystal Structure Of The Human Centromeric Nucleosome Containing Cenp-A
Nature V. 476 232 2011
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
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No.
Name
Count
Type
Full Name
1
MSE
4
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_036206 (E63Q, chain B/F, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_036206
E
64
Q
H4_HUMAN
Unclassified
---
B/F
E
63
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: HISTONE_H2A (C:21-27,G:21-27)
2: HISTONE_H3_2 (A:66-74,E:66-74)
3: HISTONE_H2B (D:92-114,H:92-114)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HISTONE_H2A
PS00046
Histone H2A signature.
H2A1B_HUMAN
22-28
2
C:21-27
G:21-27
2
HISTONE_H3_2
PS00959
Histone H3 signature 2.
CENPA_HUMAN
66-74
2
A:66-74
E:66-74
3
HISTONE_H2B
PS00357
Histone H2B signature.
H2B1J_HUMAN
93-115
2
D:92-114
H:92-114
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Exons
(1, 2)
Info
All Exons
Exon 1.1 (B:25-102 | F:24-102)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000377803
1
ENSE00001475159
chr6:
26104104-26104518
415
H4_HUMAN
1-127
127
2
B:25-102
F:24-102
78
79
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Asymmetric Unit 1
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