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3AG0
Asym. Unit
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Asym.Unit (33 KB)
Biol.Unit 1 (29 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CARBONMONOXY HUMNAN CYTOGLOBIN
Authors
:
M. Makino, H. Sawai, Y. Shiro, H. Sugimoto
Date
:
17 Mar 10 (Deposition) - 02 Feb 11 (Release) - 27 Apr 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Globins, Heme, Carbon Monoxide, Complex, Ligands, Hexacoordination, Bis-His, Disulfide Bond, Iron, Metal-Binding, Oxygen Transport, Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Makino, H. Sawai, Y. Shiro, H. Sugimoto
Crystal Structure Of The Carbon Monoxide Complex Of Human Cytoglobin
Proteins V. 79 1143 2011
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CARBON MONOXIDE (CMOa)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CMO
1
Ligand/Ion
CARBON MONOXIDE
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:56 , TYR A:59 , PHE A:60 , GLN A:62 , ARG A:79 , HIS A:81 , ARG A:84 , ALA A:88 , HIS A:113 , HIS A:117 , VAL A:119 , PHE A:124 , CMO A:192 , HOH A:234
BINDING SITE FOR RESIDUE HEM A 191
2
AC2
SOFTWARE
VAL A:85 , HEM A:191
BINDING SITE FOR RESIDUE CMO A 192
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: GLOBIN (A:19-158)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLOBIN
PS01033
Globin family profile.
CYGB_HUMAN
19-158
1
A:19-158
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Exons
(3, 3)
Info
All Exons
Exon 1.1 (A:18-48)
Exon 1.2 (A:48-125)
Exon 1.3 (A:126-175)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000293230
1
ENSE00001246500
chr17:
74533966-74533482
485
CYGB_HUMAN
1-48
48
1
A:18-48
31
1.2
ENST00000293230
2
ENSE00001058643
chr17:
74527773-74527542
232
CYGB_HUMAN
48-125
78
1
A:48-125
78
1.3
ENST00000293230
3
ENSE00001118062
chr17:
74527224-74527061
164
CYGB_HUMAN
126-180
55
1
A:126-175
50
1.4
ENST00000293230
4
ENSE00001193939
chr17:
74524693-74523461
1233
CYGB_HUMAN
180-190
11
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d3ag0a_ (A:)
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Organisms
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Globins
(1157)
Protein domain
:
Cytoglobin
(8)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d3ag0a_
A:
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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