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3A9Q
Asym. Unit
Info
Asym.Unit (892 KB)
Biol.Unit 1 (870 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF E173A VARIANT OF THE SOYBEAN FERRITIN SFER4
Authors
:
T. Masuda, F. Goto, T. Yoshihara, B. Mikami
Date
:
05 Nov 09 (Deposition) - 08 Dec 09 (Release) - 09 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X (1x)
Keywords
:
4-Helix Bundle, Chloroplast, Iron, Iron Storage, Metal- Binding, Oxidoreductase, Plastid, Transit Peptide
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Masuda, F. Goto, T. Yoshihara, B. Mikami
Crystal Structure Of Plant Ferritin Reveals A Novel Metal Binding Site That Functions As A Transit Site For Metal Transfer In Ferritin
J. Biol. Chem. V. 285 4049 2010
[
close entry info
]
Hetero Components
(2, 142)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
1f: ACETIC ACID (ACYf)
1g: ACETIC ACID (ACYg)
1h: ACETIC ACID (ACYh)
1i: ACETIC ACID (ACYi)
1j: ACETIC ACID (ACYj)
1k: ACETIC ACID (ACYk)
1l: ACETIC ACID (ACYl)
1m: ACETIC ACID (ACYm)
1n: ACETIC ACID (ACYn)
1o: ACETIC ACID (ACYo)
1p: ACETIC ACID (ACYp)
1q: ACETIC ACID (ACYq)
1r: ACETIC ACID (ACYr)
2a: CALCIUM ION (CAa)
2aa: CALCIUM ION (CAaa)
2ab: CALCIUM ION (CAab)
2ac: CALCIUM ION (CAac)
2ad: CALCIUM ION (CAad)
2ae: CALCIUM ION (CAae)
2af: CALCIUM ION (CAaf)
2ag: CALCIUM ION (CAag)
2ah: CALCIUM ION (CAah)
2ai: CALCIUM ION (CAai)
2aj: CALCIUM ION (CAaj)
2ak: CALCIUM ION (CAak)
2al: CALCIUM ION (CAal)
2am: CALCIUM ION (CAam)
2an: CALCIUM ION (CAan)
2ao: CALCIUM ION (CAao)
2ap: CALCIUM ION (CAap)
2aq: CALCIUM ION (CAaq)
2ar: CALCIUM ION (CAar)
2as: CALCIUM ION (CAas)
2at: CALCIUM ION (CAat)
2au: CALCIUM ION (CAau)
2av: CALCIUM ION (CAav)
2aw: CALCIUM ION (CAaw)
2ax: CALCIUM ION (CAax)
2ay: CALCIUM ION (CAay)
2az: CALCIUM ION (CAaz)
2b: CALCIUM ION (CAb)
2ba: CALCIUM ION (CAba)
2bb: CALCIUM ION (CAbb)
2bc: CALCIUM ION (CAbc)
2bd: CALCIUM ION (CAbd)
2be: CALCIUM ION (CAbe)
2bf: CALCIUM ION (CAbf)
2bg: CALCIUM ION (CAbg)
2bh: CALCIUM ION (CAbh)
2bi: CALCIUM ION (CAbi)
2bj: CALCIUM ION (CAbj)
2bk: CALCIUM ION (CAbk)
2bl: CALCIUM ION (CAbl)
2bm: CALCIUM ION (CAbm)
2bn: CALCIUM ION (CAbn)
2bo: CALCIUM ION (CAbo)
2bp: CALCIUM ION (CAbp)
2bq: CALCIUM ION (CAbq)
2br: CALCIUM ION (CAbr)
2bs: CALCIUM ION (CAbs)
2bt: CALCIUM ION (CAbt)
2bu: CALCIUM ION (CAbu)
2bv: CALCIUM ION (CAbv)
2bw: CALCIUM ION (CAbw)
2bx: CALCIUM ION (CAbx)
2by: CALCIUM ION (CAby)
2bz: CALCIUM ION (CAbz)
2c: CALCIUM ION (CAc)
2ca: CALCIUM ION (CAca)
2cb: CALCIUM ION (CAcb)
2cc: CALCIUM ION (CAcc)
2cd: CALCIUM ION (CAcd)
2ce: CALCIUM ION (CAce)
2cf: CALCIUM ION (CAcf)
2cg: CALCIUM ION (CAcg)
2ch: CALCIUM ION (CAch)
2ci: CALCIUM ION (CAci)
2cj: CALCIUM ION (CAcj)
2ck: CALCIUM ION (CAck)
2cl: CALCIUM ION (CAcl)
2cm: CALCIUM ION (CAcm)
2cn: CALCIUM ION (CAcn)
2co: CALCIUM ION (CAco)
2cp: CALCIUM ION (CAcp)
2cq: CALCIUM ION (CAcq)
2cr: CALCIUM ION (CAcr)
2cs: CALCIUM ION (CAcs)
2ct: CALCIUM ION (CAct)
2cu: CALCIUM ION (CAcu)
2cv: CALCIUM ION (CAcv)
2cw: CALCIUM ION (CAcw)
2cx: CALCIUM ION (CAcx)
2cy: CALCIUM ION (CAcy)
2cz: CALCIUM ION (CAcz)
2d: CALCIUM ION (CAd)
2da: CALCIUM ION (CAda)
2db: CALCIUM ION (CAdb)
2dc: CALCIUM ION (CAdc)
2dd: CALCIUM ION (CAdd)
2de: CALCIUM ION (CAde)
2df: CALCIUM ION (CAdf)
2dg: CALCIUM ION (CAdg)
2dh: CALCIUM ION (CAdh)
2di: CALCIUM ION (CAdi)
2dj: CALCIUM ION (CAdj)
2dk: CALCIUM ION (CAdk)
2dl: CALCIUM ION (CAdl)
2dm: CALCIUM ION (CAdm)
2dn: CALCIUM ION (CAdn)
2do: CALCIUM ION (CAdo)
2dp: CALCIUM ION (CAdp)
2dq: CALCIUM ION (CAdq)
2dr: CALCIUM ION (CAdr)
2ds: CALCIUM ION (CAds)
2dt: CALCIUM ION (CAdt)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
2k: CALCIUM ION (CAk)
2l: CALCIUM ION (CAl)
2m: CALCIUM ION (CAm)
2n: CALCIUM ION (CAn)
2o: CALCIUM ION (CAo)
2p: CALCIUM ION (CAp)
2q: CALCIUM ION (CAq)
2r: CALCIUM ION (CAr)
2s: CALCIUM ION (CAs)
2t: CALCIUM ION (CAt)
2u: CALCIUM ION (CAu)
2v: CALCIUM ION (CAv)
2w: CALCIUM ION (CAw)
2x: CALCIUM ION (CAx)
2y: CALCIUM ION (CAy)
2z: CALCIUM ION (CAz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACY
18
Ligand/Ion
ACETIC ACID
2
CA
124
Ligand/Ion
CALCIUM ION
[
close Hetero Component info
]
Sites
(142, 142)
Info
All Sites
001: AC1 (SOFTWARE)
002: AC2 (SOFTWARE)
003: AC3 (SOFTWARE)
004: AC4 (SOFTWARE)
005: AC5 (SOFTWARE)
006: AC6 (SOFTWARE)
007: AC7 (SOFTWARE)
008: AC8 (SOFTWARE)
009: AC9 (SOFTWARE)
010: BC1 (SOFTWARE)
011: BC2 (SOFTWARE)
012: BC3 (SOFTWARE)
013: BC4 (SOFTWARE)
014: BC5 (SOFTWARE)
015: BC6 (SOFTWARE)
016: BC7 (SOFTWARE)
017: BC8 (SOFTWARE)
018: BC9 (SOFTWARE)
019: CC1 (SOFTWARE)
020: CC2 (SOFTWARE)
021: CC3 (SOFTWARE)
022: CC4 (SOFTWARE)
023: CC5 (SOFTWARE)
024: CC6 (SOFTWARE)
025: CC7 (SOFTWARE)
026: CC8 (SOFTWARE)
027: CC9 (SOFTWARE)
028: DC1 (SOFTWARE)
029: DC2 (SOFTWARE)
030: DC3 (SOFTWARE)
031: DC4 (SOFTWARE)
032: DC5 (SOFTWARE)
033: DC6 (SOFTWARE)
034: DC7 (SOFTWARE)
035: DC8 (SOFTWARE)
036: DC9 (SOFTWARE)
037: EC1 (SOFTWARE)
038: EC2 (SOFTWARE)
039: EC3 (SOFTWARE)
040: EC4 (SOFTWARE)
041: EC5 (SOFTWARE)
042: EC6 (SOFTWARE)
043: EC7 (SOFTWARE)
044: EC8 (SOFTWARE)
045: EC9 (SOFTWARE)
046: FC1 (SOFTWARE)
047: FC2 (SOFTWARE)
048: FC3 (SOFTWARE)
049: FC4 (SOFTWARE)
050: FC5 (SOFTWARE)
051: FC6 (SOFTWARE)
052: FC7 (SOFTWARE)
053: FC8 (SOFTWARE)
054: FC9 (SOFTWARE)
055: GC1 (SOFTWARE)
056: GC2 (SOFTWARE)
057: GC3 (SOFTWARE)
058: GC4 (SOFTWARE)
059: GC5 (SOFTWARE)
060: GC6 (SOFTWARE)
061: GC7 (SOFTWARE)
062: GC8 (SOFTWARE)
063: GC9 (SOFTWARE)
064: HC1 (SOFTWARE)
065: HC2 (SOFTWARE)
066: HC3 (SOFTWARE)
067: HC4 (SOFTWARE)
068: HC5 (SOFTWARE)
069: HC6 (SOFTWARE)
070: HC7 (SOFTWARE)
071: HC8 (SOFTWARE)
072: HC9 (SOFTWARE)
073: IC1 (SOFTWARE)
074: IC2 (SOFTWARE)
075: IC3 (SOFTWARE)
076: IC4 (SOFTWARE)
077: IC5 (SOFTWARE)
078: IC6 (SOFTWARE)
079: IC7 (SOFTWARE)
080: IC8 (SOFTWARE)
081: IC9 (SOFTWARE)
082: JC1 (SOFTWARE)
083: JC2 (SOFTWARE)
084: JC3 (SOFTWARE)
085: JC4 (SOFTWARE)
086: JC5 (SOFTWARE)
087: JC6 (SOFTWARE)
088: JC7 (SOFTWARE)
089: JC8 (SOFTWARE)
090: JC9 (SOFTWARE)
091: KC1 (SOFTWARE)
092: KC2 (SOFTWARE)
093: KC3 (SOFTWARE)
094: KC4 (SOFTWARE)
095: KC5 (SOFTWARE)
096: KC6 (SOFTWARE)
097: KC7 (SOFTWARE)
098: KC8 (SOFTWARE)
099: KC9 (SOFTWARE)
100: LC1 (SOFTWARE)
101: LC2 (SOFTWARE)
102: LC3 (SOFTWARE)
103: LC4 (SOFTWARE)
104: LC5 (SOFTWARE)
105: LC6 (SOFTWARE)
106: LC7 (SOFTWARE)
107: LC8 (SOFTWARE)
108: LC9 (SOFTWARE)
109: MC1 (SOFTWARE)
110: MC2 (SOFTWARE)
111: MC3 (SOFTWARE)
112: MC4 (SOFTWARE)
113: MC5 (SOFTWARE)
114: MC6 (SOFTWARE)
115: MC7 (SOFTWARE)
116: MC8 (SOFTWARE)
117: MC9 (SOFTWARE)
118: NC1 (SOFTWARE)
119: NC2 (SOFTWARE)
120: NC3 (SOFTWARE)
121: NC4 (SOFTWARE)
122: NC5 (SOFTWARE)
123: NC6 (SOFTWARE)
124: NC7 (SOFTWARE)
125: NC8 (SOFTWARE)
126: NC9 (SOFTWARE)
127: OC1 (SOFTWARE)
128: OC2 (SOFTWARE)
129: OC3 (SOFTWARE)
130: OC4 (SOFTWARE)
131: OC5 (SOFTWARE)
132: OC6 (SOFTWARE)
133: OC7 (SOFTWARE)
134: OC8 (SOFTWARE)
135: OC9 (SOFTWARE)
136: PC1 (SOFTWARE)
137: PC2 (SOFTWARE)
138: PC3 (SOFTWARE)
139: PC4 (SOFTWARE)
140: PC5 (SOFTWARE)
141: PC6 (SOFTWARE)
142: PC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
001
AC1
SOFTWARE
HOH A:369 , HOH A:1324 , HOH A:1325 , HOH A:1326 , HOH A:1327 , HOH A:2703 , HOH A:2704
BINDING SITE FOR RESIDUE CA A 213
002
AC2
SOFTWARE
GLU A:56 , GLU A:91 , HIS A:94 , HOH A:437 , HOH A:438 , HOH A:1328
BINDING SITE FOR RESIDUE CA A 214
003
AC3
SOFTWARE
HOH A:2552 , HOH S:1360
BINDING SITE FOR RESIDUE CA A 215
004
AC4
SOFTWARE
GLU A:93 , GLU A:96
BINDING SITE FOR RESIDUE CA A 216
005
AC5
SOFTWARE
ALA A:34 , SER A:35 , ARG A:38 , LYS A:108 , HOH A:413
BINDING SITE FOR RESIDUE ACY A 217
006
AC6
SOFTWARE
GLU B:56 , GLU B:91 , HIS B:94 , HOH B:444 , HOH B:445 , HOH B:446
BINDING SITE FOR RESIDUE CA B 213
007
AC7
SOFTWARE
GLU B:167 , HOH B:449 , GLU E:167 , CA E:213 , HOH E:1899 , HOH E:2766 , HOH V:1313
BINDING SITE FOR RESIDUE CA B 214
008
AC8
SOFTWARE
HOH B:984 , HOH B:1329 , HOH B:1330 , HOH B:1331 , HOH B:1332 , HOH B:3086
BINDING SITE FOR RESIDUE CA B 215
009
AC9
SOFTWARE
HOH B:3099 , HOH B:3100
BINDING SITE FOR RESIDUE CA B 216
010
BC1
SOFTWARE
GLU B:93 , GLU B:96 , CA B:218
BINDING SITE FOR RESIDUE CA B 217
011
BC2
SOFTWARE
GLU B:93 , GLU B:96 , CA B:217
BINDING SITE FOR RESIDUE CA B 218
012
BC3
SOFTWARE
GLU C:56 , GLU C:91 , HIS C:94 , HOH C:455 , HOH C:456 , HOH C:457
BINDING SITE FOR RESIDUE CA C 213
013
BC4
SOFTWARE
ASP C:164 , GLU C:167 , HOH C:1739 , GLU R:167 , CA R:213 , GLU S:167 , HOH S:473 , HOH S:1740 , HOH S:1741
BINDING SITE FOR RESIDUE CA C 214
014
BC5
SOFTWARE
HOH C:994 , HOH C:1336 , HOH C:1663 , HOH C:1664 , HOH C:2724 , HOH C:3115 , HOH C:3117
BINDING SITE FOR RESIDUE CA C 215
015
BC6
SOFTWARE
GLU C:93 , GLU C:96
BINDING SITE FOR RESIDUE CA C 216
016
BC7
SOFTWARE
HOH C:462 , HOH C:2883
BINDING SITE FOR RESIDUE CA C 217
017
BC8
SOFTWARE
GLU D:56 , GLU D:91 , HIS D:94 , HOH D:478 , HOH D:479 , HOH D:480
BINDING SITE FOR RESIDUE CA D 213
018
BC9
SOFTWARE
HOH D:505 , HOH D:2748 , HOH D:3176 , HOH D:3514
BINDING SITE FOR RESIDUE CA D 214
019
CC1
SOFTWARE
GLU D:93 , GLU D:96 , CA D:216
BINDING SITE FOR RESIDUE CA D 215
020
CC2
SOFTWARE
GLU D:93 , GLU D:96 , CA D:215
BINDING SITE FOR RESIDUE CA D 216
021
CC3
SOFTWARE
GLU B:167 , CA B:214 , HOH B:1554 , HOH B:1555 , ASP E:164 , GLU E:167 , HOH E:448 , ASP V:164
BINDING SITE FOR RESIDUE CA E 213
022
CC4
SOFTWARE
GLU E:56 , GLU E:91 , HIS E:94 , HOH E:223 , HOH E:509 , HOH E:510
BINDING SITE FOR RESIDUE CA E 214
023
CC5
SOFTWARE
HOH E:885 , HOH E:902 , HOH E:1339 , HOH E:1340 , HOH E:1341 , HOH E:1857 , HOH E:2752
BINDING SITE FOR RESIDUE CA E 215
024
CC6
SOFTWARE
GLU E:93 , GLU E:96 , CA E:217 , GLU I:89
BINDING SITE FOR RESIDUE CA E 216
025
CC7
SOFTWARE
GLU E:93 , GLU E:96 , CA E:216
BINDING SITE FOR RESIDUE CA E 217
026
CC8
SOFTWARE
ALA E:34 , SER E:35 , ARG E:38 , LYS E:108 , HOH E:779 , HOH E:1857
BINDING SITE FOR RESIDUE ACY E 218
027
CC9
SOFTWARE
GLU F:56 , GLU F:91 , HIS F:94 , HOH F:522 , HOH F:523 , HOH F:524
BINDING SITE FOR RESIDUE CA F 213
028
DC1
SOFTWARE
GLU F:167 , HOH F:525 , HOH F:555 , GLU G:167 , CA G:215 , HOH G:526 , HOH G:567 , GLU O:167 , HOH O:566 , HOH O:568
BINDING SITE FOR RESIDUE CA F 214
029
DC2
SOFTWARE
HOH F:395 , HOH F:796 , HOH F:1342 , HOH F:1343 , HOH F:1344 , HOH F:1928 , HOH F:1929
BINDING SITE FOR RESIDUE CA F 215
030
DC3
SOFTWARE
HOH F:1482
BINDING SITE FOR RESIDUE CA F 216
031
DC4
SOFTWARE
HOH B:3059 , GLU F:93 , GLU F:96 , CA F:218
BINDING SITE FOR RESIDUE CA F 217
032
DC5
SOFTWARE
GLU F:93 , GLU F:96 , CA F:217
BINDING SITE FOR RESIDUE CA F 218
033
DC6
SOFTWARE
ALA F:34 , SER F:35 , ARG F:38 , LYS F:108 , HOH F:259 , HOH F:1929
BINDING SITE FOR RESIDUE ACY F 219
034
DC7
SOFTWARE
HOH G:540 , HOH G:541 , HOH G:545 , HOH G:546 , HOH G:1963 , HOH G:3244
BINDING SITE FOR RESIDUE CA G 213
035
DC8
SOFTWARE
GLU G:56 , GLU G:91 , HIS G:94 , HOH G:551 , HOH G:552 , HOH G:553
BINDING SITE FOR RESIDUE CA G 214
036
DC9
SOFTWARE
ASP F:164 , CA F:214 , HOH F:525 , HOH F:1221 , ASP G:164 , THR G:168 , HOH G:567 , HOH G:1220 , HOH O:568
BINDING SITE FOR RESIDUE CA G 215
037
EC1
SOFTWARE
HOH B:3054 , HOH B:3056 , HOH G:1540 , HOH G:3055 , HOH G:3057
BINDING SITE FOR RESIDUE CA G 216
038
EC2
SOFTWARE
GLU G:93 , GLU G:96 , CA G:218
BINDING SITE FOR RESIDUE CA G 217
039
EC3
SOFTWARE
GLU G:93 , GLU G:96 , CA G:217
BINDING SITE FOR RESIDUE CA G 218
040
EC4
SOFTWARE
ALA G:34 , SER G:35 , ARG G:38 , LYS G:108 , HOH G:542
BINDING SITE FOR RESIDUE ACY G 219
041
EC5
SOFTWARE
HOH H:358 , HOH H:569 , HOH H:570 , HOH H:574 , HOH H:575 , HOH H:1984 , HOH H:1985
BINDING SITE FOR RESIDUE CA H 213
042
EC6
SOFTWARE
GLU H:56 , GLU H:91 , HIS H:94 , HOH H:583 , HOH H:584 , HOH H:585
BINDING SITE FOR RESIDUE CA H 214
043
EC7
SOFTWARE
GLU H:93 , GLU H:96 , CA H:216
BINDING SITE FOR RESIDUE CA H 215
044
EC8
SOFTWARE
GLU H:93 , GLU H:96 , CA H:215
BINDING SITE FOR RESIDUE CA H 216
045
EC9
SOFTWARE
HOH H:936 , HOH H:2795 , HOH H:2796
BINDING SITE FOR RESIDUE CA H 217
046
FC1
SOFTWARE
ALA H:34 , SER H:35 , ARG H:38 , LYS H:108 , HOH H:575 , HOH H:1018
BINDING SITE FOR RESIDUE ACY H 218
047
FC2
SOFTWARE
GLU D:167 , HOH D:485 , HOH D:486 , HOH D:489 , ASP I:164 , GLU I:167 , HOH I:2675 , GLU W:167 , CA W:216
BINDING SITE FOR RESIDUE CA I 213
048
FC3
SOFTWARE
HOH I:590 , HOH I:591 , HOH I:592 , HOH I:593 , HOH I:2821 , HOH I:3277 , HOH I:3278
BINDING SITE FOR RESIDUE CA I 214
049
FC4
SOFTWARE
GLU I:56 , GLU I:91 , HIS I:94 , HOH I:616 , HOH I:617 , HOH I:618
BINDING SITE FOR RESIDUE CA I 215
050
FC5
SOFTWARE
GLU I:93 , GLU I:96
BINDING SITE FOR RESIDUE CA I 216
051
FC6
SOFTWARE
HOH H:2741 , HOH H:3168 , HOH I:624
BINDING SITE FOR RESIDUE CA I 217
052
FC7
SOFTWARE
ALA I:34 , SER I:35 , ARG I:38 , LYS I:108 , HOH I:596
BINDING SITE FOR RESIDUE ACY I 218
053
FC8
SOFTWARE
HOH J:1086 , HOH J:1107 , HOH J:1108 , HOH J:1109 , HOH J:1110 , HOH J:2065 , HOH J:2066
BINDING SITE FOR RESIDUE CA J 213
054
FC9
SOFTWARE
GLU J:56 , GLU J:91 , HIS J:94 , HOH J:1070 , HOH J:1114 , HOH J:1115
BINDING SITE FOR RESIDUE CA J 214
055
GC1
SOFTWARE
GLU J:93 , GLU J:96
BINDING SITE FOR RESIDUE CA J 215
056
GC2
SOFTWARE
HOH J:2105 , HOH J:2113
BINDING SITE FOR RESIDUE CA J 216
057
GC3
SOFTWARE
ASP J:164 , THR J:168 , ASP N:164 , CA N:213 , HOH N:728 , HOH N:1204 , HOH Q:785
BINDING SITE FOR RESIDUE CA J 217
058
GC4
SOFTWARE
ALA J:34 , SER J:35 , ARG J:38 , LYS J:108 , HOH J:925 , HOH J:2066
BINDING SITE FOR RESIDUE ACY J 218
059
GC5
SOFTWARE
HOH K:910 , HOH K:1068 , HOH K:1126 , HOH K:1127 , HOH K:2843 , HOH K:2844
BINDING SITE FOR RESIDUE CA K 213
060
GC6
SOFTWARE
GLU K:56 , GLU K:91 , HIS K:94 , HOH K:1132 , HOH K:2150 , HOH K:2151
BINDING SITE FOR RESIDUE CA K 214
061
GC7
SOFTWARE
GLU K:167 , HOH K:1133 , HOH K:3407 , GLU P:167 , HOH P:891 , HOH P:2510 , GLU U:167 , HOH U:1134 , HOH U:1135
BINDING SITE FOR RESIDUE CA K 215
062
GC8
SOFTWARE
GLU K:93 , GLU K:96 , CA K:217
BINDING SITE FOR RESIDUE CA K 216
063
GC9
SOFTWARE
GLU K:93 , GLU K:96 , CA K:216
BINDING SITE FOR RESIDUE CA K 217
064
HC1
SOFTWARE
HOH K:1146 , HOH K:1147 , HOH K:2852 , HOH Q:2524
BINDING SITE FOR RESIDUE CA K 218
065
HC2
SOFTWARE
HOH L:384 , HOH L:1149 , HOH L:1150 , HOH L:1151 , HOH L:1152 , HOH L:1153 , HOH L:1154
BINDING SITE FOR RESIDUE CA L 213
066
HC3
SOFTWARE
GLU L:56 , GLU L:91 , HIS L:94 , HOH L:1164 , HOH L:1165 , HOH L:2861
BINDING SITE FOR RESIDUE CA L 214
067
HC4
SOFTWARE
ASP L:164 , GLU L:167 , HOH L:1168 , GLU M:167 , HOH M:1167 , HOH M:3324 , ASP T:164
BINDING SITE FOR RESIDUE CA L 215
068
HC5
SOFTWARE
GLU L:167 , HOH L:2865 , GLU M:167 , HOH M:2372 , HOH T:1166
BINDING SITE FOR RESIDUE CA L 216
069
HC6
SOFTWARE
GLU L:93 , GLU L:96
BINDING SITE FOR RESIDUE CA L 217
070
HC7
SOFTWARE
HOH L:1179 , HOH L:3327 , HOH P:1178
BINDING SITE FOR RESIDUE CA L 218
071
HC8
SOFTWARE
ALA L:34 , SER L:35 , ARG L:38 , LYS L:108 , HOH L:1089 , HOH L:1153
BINDING SITE FOR RESIDUE ACY L 219
072
HC9
SOFTWARE
HOH M:350 , HOH M:1182 , HOH M:1183 , HOH M:1184 , HOH M:1185 , HOH M:2876 , HOH M:2877
BINDING SITE FOR RESIDUE CA M 213
073
IC1
SOFTWARE
GLU M:56 , GLU M:91 , HIS M:94 , HOH M:1079 , HOH M:1190 , HOH M:1191
BINDING SITE FOR RESIDUE CA M 214
074
IC2
SOFTWARE
HOH M:2276 , HOH M:2894 , HOH M:2895
BINDING SITE FOR RESIDUE CA M 215
075
IC3
SOFTWARE
GLU M:93 , GLU M:96 , CA M:217 , HOH M:3333
BINDING SITE FOR RESIDUE CA M 216
076
IC4
SOFTWARE
GLU M:93 , GLU M:96 , CA M:216
BINDING SITE FOR RESIDUE CA M 217
077
IC5
SOFTWARE
ALA M:34 , SER M:35 , ARG M:38 , LYS M:108 , HOH M:227 , HOH M:2876
BINDING SITE FOR RESIDUE ACY M 218
078
IC6
SOFTWARE
GLU J:167 , CA J:217 , ASP N:164 , GLU N:167 , HOH N:1118 , HOH N:1204 , HOH Q:785 , HOH Q:1117 , HOH Q:2056
BINDING SITE FOR RESIDUE CA N 213
079
IC7
SOFTWARE
HOH N:1194 , HOH N:1456 , HOH N:2385
BINDING SITE FOR RESIDUE CA N 214
080
IC8
SOFTWARE
GLU N:56 , GLU N:91 , HIS N:94 , HOH N:937 , HOH N:1200 , HOH N:1201
BINDING SITE FOR RESIDUE CA N 215
081
IC9
SOFTWARE
HOH N:2423 , HOH N:2424 , HOH N:3361 , HOH N:3362 , HOH U:2907
BINDING SITE FOR RESIDUE CA N 216
082
JC1
SOFTWARE
GLU N:93 , GLU N:96 , CA N:218
BINDING SITE FOR RESIDUE CA N 217
083
JC2
SOFTWARE
GLU N:93 , GLU N:96 , CA N:217 , HOH N:3351
BINDING SITE FOR RESIDUE CA N 218
084
JC3
SOFTWARE
HOH O:772 , HOH O:1014 , HOH O:1207 , HOH O:1208 , HOH O:1209 , HOH O:1210 , HOH O:2912
BINDING SITE FOR RESIDUE CA O 213
085
JC4
SOFTWARE
GLU O:56 , GLU O:91 , HIS O:94 , HOH O:705 , HOH O:1211 , HOH O:1212
BINDING SITE FOR RESIDUE CA O 214
086
JC5
SOFTWARE
GLU C:89 , GLU O:93 , GLU O:96 , CA O:216
BINDING SITE FOR RESIDUE CA O 215
087
JC6
SOFTWARE
GLU O:93 , GLU O:96 , GLU O:100 , CA O:215
BINDING SITE FOR RESIDUE CA O 216
088
JC7
SOFTWARE
HOH O:1216 , HOH O:2802 , HOH O:3388
BINDING SITE FOR RESIDUE CA O 217
089
JC8
SOFTWARE
ALA O:34 , SER O:35 , ARG O:38 , LYS O:108 , HOH O:300
BINDING SITE FOR RESIDUE ACY O 218
090
JC9
SOFTWARE
HOH K:1137 , HOH K:3407 , ASP P:164 , THR P:168 , HOH P:1136 , HOH P:2510 , HOH U:1135 , HOH U:1231
BINDING SITE FOR RESIDUE CA P 213
091
KC1
SOFTWARE
HOH P:1073 , HOH P:1223 , HOH P:1224 , HOH P:2472 , HOH P:2473 , HOH P:2474 , HOH P:2926
BINDING SITE FOR RESIDUE CA P 214
092
KC2
SOFTWARE
GLU P:56 , GLU P:91 , HIS P:94 , HOH P:1227 , HOH P:1228 , HOH P:1229
BINDING SITE FOR RESIDUE CA P 215
093
KC3
SOFTWARE
HOH P:2935 , HOH P:3511
BINDING SITE FOR RESIDUE CA P 216
094
KC4
SOFTWARE
GLU P:93 , GLU P:96 , HOH P:3402 , HOH P:3403 , GLU T:89
BINDING SITE FOR RESIDUE CA P 217
095
KC5
SOFTWARE
ALA P:34 , SER P:35 , ARG P:38 , LYS P:108 , HOH P:696 , HOH P:1224
BINDING SITE FOR RESIDUE ACY P 218
096
KC6
SOFTWARE
HOH Q:247 , HOH Q:944 , HOH Q:1233 , HOH Q:1234 , HOH Q:1235 , HOH Q:3415 , HOH Q:3416
BINDING SITE FOR RESIDUE CA Q 213
097
KC7
SOFTWARE
GLU Q:56 , GLU Q:91 , HIS Q:94 , HOH Q:1006 , HOH Q:1240 , HOH Q:1241
BINDING SITE FOR RESIDUE CA Q 214
098
KC8
SOFTWARE
GLU Q:93 , GLU Q:96 , CA Q:216 , HOH Q:3428
BINDING SITE FOR RESIDUE CA Q 215
099
KC9
SOFTWARE
GLU Q:93 , GLU Q:96 , CA Q:215 , HOH Q:3427
BINDING SITE FOR RESIDUE CA Q 216
100
LC1
SOFTWARE
ALA Q:34 , SER Q:35 , ARG Q:38 , LYS Q:108 , HOH Q:224 , HOH Q:3415
BINDING SITE FOR RESIDUE ACY Q 217
101
LC2
SOFTWARE
ASP C:164 , CA C:214 , HOH C:467 , HOH C:1262 , ASP R:164 , THR R:168 , HOH R:2958 , HOH S:1741
BINDING SITE FOR RESIDUE CA R 213
102
LC3
SOFTWARE
HOH R:934 , HOH R:1251 , HOH R:1252 , HOH R:1253 , HOH R:1254 , HOH R:1255 , HOH R:2950
BINDING SITE FOR RESIDUE CA R 214
103
LC4
SOFTWARE
GLU R:56 , GLU R:91 , HIS R:94 , HOH R:1022 , HOH R:1260 , HOH R:1261
BINDING SITE FOR RESIDUE CA R 215
104
LC5
SOFTWARE
GLU N:89 , GLU R:93 , GLU R:96 , CA R:217
BINDING SITE FOR RESIDUE CA R 216
105
LC6
SOFTWARE
GLU R:93 , GLU R:96 , CA R:216
BINDING SITE FOR RESIDUE CA R 217
106
LC7
SOFTWARE
HOH R:1709 , HOH R:1710
BINDING SITE FOR RESIDUE CA R 218
107
LC8
SOFTWARE
ALA R:34 , SER R:35 , ARG R:38 , LYS R:108 , HOH R:782 , HOH R:1254
BINDING SITE FOR RESIDUE ACY R 219
108
LC9
SOFTWARE
HOH S:643 , HOH S:1265 , HOH S:1266 , HOH S:1267 , HOH S:2576 , HOH S:2577 , HOH S:2962
BINDING SITE FOR RESIDUE CA S 213
109
MC1
SOFTWARE
GLU S:56 , GLU S:91 , HIS S:94 , HOH S:352 , HOH S:1269 , HOH S:1270
BINDING SITE FOR RESIDUE CA S 214
110
MC2
SOFTWARE
GLU S:93 , GLU S:96 , CA S:216
BINDING SITE FOR RESIDUE CA S 215
111
MC3
SOFTWARE
GLU S:93 , GLU S:96 , CA S:215 , HOH S:3332 , HOH S:3453
BINDING SITE FOR RESIDUE CA S 216
112
MC4
SOFTWARE
HOH S:1277 , HOH S:2968
BINDING SITE FOR RESIDUE CA S 217
113
MC5
SOFTWARE
ALA S:34 , SER S:35 , LYS S:108 , HOH S:673 , HOH S:2962
BINDING SITE FOR RESIDUE ACY S 218
114
MC6
SOFTWARE
HOH T:1280 , HOH T:1281 , HOH T:1282 , HOH T:2591 , HOH T:2592 , HOH T:2593
BINDING SITE FOR RESIDUE CA T 213
115
MC7
SOFTWARE
GLU T:56 , GLU T:91 , HIS T:94 , HOH T:1284 , HOH T:1285 , HOH T:2377
BINDING SITE FOR RESIDUE CA T 214
116
MC8
SOFTWARE
GLU T:93 , GLU T:96 , CA T:216
BINDING SITE FOR RESIDUE CA T 215
117
MC9
SOFTWARE
GLU T:93 , GLU T:96 , CA T:215
BINDING SITE FOR RESIDUE CA T 216
118
NC1
SOFTWARE
HOH T:1291 , HOH T:2890 , HOH T:3451
BINDING SITE FOR RESIDUE CA T 217
119
NC2
SOFTWARE
ALA T:34 , SER T:35 , ARG T:38 , LYS T:108 , HOH T:962
BINDING SITE FOR RESIDUE ACY T 218
120
NC3
SOFTWARE
GLU U:56 , GLU U:91 , HIS U:94 , HOH U:347 , HOH U:829 , HOH U:1297
BINDING SITE FOR RESIDUE CA U 213
121
NC4
SOFTWARE
HOH Q:3422 , GLU U:93 , GLU U:96 , CA U:215
BINDING SITE FOR RESIDUE CA U 214
122
NC5
SOFTWARE
GLU U:93 , GLU U:96 , CA U:214 , HOH U:3423
BINDING SITE FOR RESIDUE CA U 215
123
NC6
SOFTWARE
HOH U:2493 , HOH U:2597 , HOH U:2988
BINDING SITE FOR RESIDUE CA U 216
124
NC7
SOFTWARE
HOH V:1304 , HOH V:1305 , HOH V:1306 , HOH V:1612 , HOH V:1613 , HOH V:2990 , HOH V:2991
BINDING SITE FOR RESIDUE CA V 213
125
NC8
SOFTWARE
GLU V:56 , GLU V:91 , HIS V:94 , HOH V:1308 , HOH V:1309 , HOH V:1310
BINDING SITE FOR RESIDUE CA V 214
126
NC9
SOFTWARE
HOH F:2996 , HOH V:1559 , HOH V:2997 , HOH V:3487
BINDING SITE FOR RESIDUE CA V 215
127
OC1
SOFTWARE
GLU V:93 , GLU V:96 , CA V:217 , HOH V:3481
BINDING SITE FOR RESIDUE CA V 216
128
OC2
SOFTWARE
GLU V:93 , GLU V:96 , CA V:216
BINDING SITE FOR RESIDUE CA V 217
129
OC3
SOFTWARE
ALA V:34 , SER V:35 , ARG V:38 , LYS V:108 , HOH V:226 , HOH V:1613
BINDING SITE FOR RESIDUE ACY V 221
130
OC4
SOFTWARE
HOH W:1314 , HOH W:1315 , HOH W:1317 , HOH W:2162 , HOH W:2665 , HOH W:2666 , HOH W:2680
BINDING SITE FOR RESIDUE CA W 213
131
OC5
SOFTWARE
GLU W:56 , GLU W:91 , HIS W:94 , HOH W:1318 , HOH W:1319 , HOH W:2671
BINDING SITE FOR RESIDUE CA W 214
132
OC6
SOFTWARE
HOH W:603 , HOH W:604
BINDING SITE FOR RESIDUE CA W 215
133
OC7
SOFTWARE
HOH D:486 , ASP I:164 , CA I:213 , HOH I:2676 , HOH I:2744 , ASP W:164 , THR W:168
BINDING SITE FOR RESIDUE CA W 216
134
OC8
SOFTWARE
ALA W:34 , SER W:35 , ARG W:38 , LYS W:108 , HOH W:2163
BINDING SITE FOR RESIDUE ACY W 231
135
OC9
SOFTWARE
GLU A:167 , HOH A:1416 , HOH A:3017 , GLU H:167 , HOH H:442 , HOH H:3018 , GLU X:167 , CA X:214 , HOH X:441
BINDING SITE FOR RESIDUE CA X 213
136
PC1
SOFTWARE
HOH A:1416 , ASP H:164 , HOH H:442 , HOH H:443 , ASP X:164 , THR X:168 , CA X:213 , HOH X:3077
BINDING SITE FOR RESIDUE CA X 214
137
PC2
SOFTWARE
HOH X:701 , HOH X:1012 , HOH X:1320 , HOH X:2684 , HOH X:2685 , HOH X:3525 , HOH X:3526
BINDING SITE FOR RESIDUE CA X 215
138
PC3
SOFTWARE
GLU X:56 , GLU X:91 , HIS X:94 , HOH X:804 , HOH X:1322 , HOH X:1323
BINDING SITE FOR RESIDUE CA X 216
139
PC4
SOFTWARE
GLU X:93 , GLU X:96 , CA X:218 , HOH X:2694
BINDING SITE FOR RESIDUE CA X 217
140
PC5
SOFTWARE
GLU X:93 , GLU X:96 , CA X:217
BINDING SITE FOR RESIDUE CA X 218
141
PC6
SOFTWARE
HOH D:3160 , HOH X:1800 , HOH X:3161 , HOH X:3267
BINDING SITE FOR RESIDUE CA X 219
142
PC7
SOFTWARE
ALA X:34 , SER X:35 , ARG X:38 , LYS X:108 , HOH X:321 , HOH X:3525 , HOH X:3529
BINDING SITE FOR RESIDUE ACY X 241
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(2, 48)
Info
All PROSITE Patterns/Profiles
1: FERRITIN_LIKE (A:39-192,B:39-192,C:39-192,D:39-19...)
2: FERRITIN_2 (A:159-179,B:159-179,C:159-179,D:15...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FERRITIN_LIKE
PS50905
Ferritin-like diiron domain profile.
FRI4_SOYBN
74-227
24
A:39-192
B:39-192
C:39-192
D:39-192
E:39-192
F:39-192
G:39-192
H:39-192
I:39-192
J:39-192
K:39-192
L:39-192
M:39-192
N:39-192
O:39-192
P:39-192
Q:39-192
R:39-192
S:39-192
T:39-192
U:39-192
V:39-192
W:39-192
X:39-192
2
FERRITIN_2
PS00204
Ferritin iron-binding regions signature 2.
FRI4_SOYBN
194-214
24
A:159-179
B:159-179
C:159-179
D:159-179
E:159-179
F:159-179
G:159-179
H:159-179
I:159-179
J:159-179
K:159-179
L:159-179
M:159-179
N:159-179
O:159-179
P:159-179
Q:159-179
R:159-179
S:159-179
T:159-179
U:159-179
V:159-179
W:159-179
X:159-179
[
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3a9qe_ (E:)
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(
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(
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(
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Organisms
(
)
(
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Class
:
All alpha proteins
(14657)
Fold
:
Ferritin-like
(533)
Superfamily
:
Ferritin-like
(489)
Family
:
automated matches
(54)
Protein domain
:
automated matches
(54)
Soybean (Glycine max) [TaxId: 3847]
(1)
1a
d3a9qe_
E:
[
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CATH Domains
(1, 24)
Info
all CATH domains
1a: CATH_3a9qE00 (E:30-207)
1b: CATH_3a9qG00 (G:15-207)
1c: CATH_3a9qQ00 (Q:15-207)
1d: CATH_3a9qS00 (S:15-207)
1e: CATH_3a9qU00 (U:15-207)
1f: CATH_3a9qV00 (V:15-207)
1g: CATH_3a9qA00 (A:14-207)
1h: CATH_3a9qB00 (B:14-207)
1i: CATH_3a9qC00 (C:14-207)
1j: CATH_3a9qD00 (D:14-207)
1k: CATH_3a9qF00 (F:14-207)
1l: CATH_3a9qJ00 (J:14-207)
1m: CATH_3a9qH00 (H:15-207)
1n: CATH_3a9qT00 (T:14-207)
1o: CATH_3a9qW00 (W:14-207)
1p: CATH_3a9qX00 (X:14-207)
1q: CATH_3a9qR00 (R:12-207)
1r: CATH_3a9qI00 (I:15-207)
1s: CATH_3a9qK00 (K:15-207)
1t: CATH_3a9qL00 (L:15-207)
1u: CATH_3a9qM00 (M:15-207)
1v: CATH_3a9qN00 (N:15-207)
1w: CATH_3a9qO00 (O:15-207)
1x: CATH_3a9qP00 (P:15-207)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Ferritin;
(180)
Homologous Superfamily
:
[code=1.20.1260.10, no name defined]
(180)
Soybeans (Glycine max)
(2)
1a
3a9qE00
E:30-207
1b
3a9qG00
G:15-207
1c
3a9qQ00
Q:15-207
1d
3a9qS00
S:15-207
1e
3a9qU00
U:15-207
1f
3a9qV00
V:15-207
1g
3a9qA00
A:14-207
1h
3a9qB00
B:14-207
1i
3a9qC00
C:14-207
1j
3a9qD00
D:14-207
1k
3a9qF00
F:14-207
1l
3a9qJ00
J:14-207
1m
3a9qH00
H:15-207
1n
3a9qT00
T:14-207
1o
3a9qW00
W:14-207
1p
3a9qX00
X:14-207
1q
3a9qR00
R:12-207
1r
3a9qI00
I:15-207
1s
3a9qK00
K:15-207
1t
3a9qL00
L:15-207
1u
3a9qM00
M:15-207
1v
3a9qN00
N:15-207
1w
3a9qO00
O:15-207
1x
3a9qP00
P:15-207
[
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Pfam Domains
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all PFAM domains
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