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3A8Y
Biol. Unit 2
Info
Asym.Unit (168 KB)
Biol.Unit 1 (85 KB)
Biol.Unit 2 (82 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE BAG5 BD5 AND HSP70 NBD
Authors
:
A. Arakawa, N. Handa, N. Ohsawa, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
13 Oct 09 (Deposition) - 31 Mar 10 (Release) - 31 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Bag Domain, Hsp70, Atpase Domain, Protein Complex, Triple Helix, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Hydrolase
(Keyword Search:
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Reference
:
A. Arakawa, N. Handa, N. Ohsawa, M. Shida, T. Kigawa, F. Hayashi, M. Shirouzu, S. Yokoyama
The C-Terminal Bag Domain Of Bag5 Induces Conformational Changes Of The Hsp70 Nucleotide-Binding Domain For Adp-Atp Exchange
Structure V. 18 309 2010
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSa)
1b: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSb)
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No.
Name
Count
Type
Full Name
1
TRS
1
Ligand/Ion
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
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Sites
(1, 1)
Info
All Sites
1: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
ASP B:10 , GLY B:12 , GLU B:175 , ASP B:199 , GLY B:338 , VAL B:369 , HOH B:504
BINDING SITE FOR RESIDUE TRS B 7360
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_032152 (I95V, chain B, )
2: VAR_029053 (E110D, chain B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_032152
I
95
V
HS71B_HUMAN
Polymorphism
---
B
I
95
V
2
UniProt
VAR_029053
E
110
D
HS71A_HUMAN
Polymorphism
562047
B
E
110
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(4, 7)
Info
All PROSITE Patterns/Profiles
1: BAG (D:365-442)
2: HSP70_1 (B:9-16)
3: HSP70_2 (B:197-210)
4: HSP70_3 (B:334-348)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BAG
PS51035
BAG domain profile.
BAG5_HUMAN
9-86
182-260
275-350
365-442
1
-
-
-
-
D:365-442
2
HSP70_1
PS00297
Heat shock hsp70 proteins family signature 1.
HS71B_HUMAN
9-16
1
-
B:9-16
HS71A_HUMAN
9-16
1
-
B:9-16
3
HSP70_2
PS00329
Heat shock hsp70 proteins family signature 2.
HS71B_HUMAN
197-210
1
-
B:197-210
HS71A_HUMAN
197-210
1
-
B:197-210
4
HSP70_3
PS01036
Heat shock hsp70 proteins family signature 3.
HS71B_HUMAN
334-348
1
-
B:334-348
HS71A_HUMAN
334-348
1
-
B:334-348
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
(4, 10)
Info
all CATH domains
1a: CATH_3a8yA02 (A:68-122)
1b: CATH_3a8yB02 (B:68-122)
2a: CATH_3a8yB01 (B:4-67,B:123-187,B:361-381)
2b: CATH_3a8yA03 (A:188-229,A:313-360)
2c: CATH_3a8yB03 (B:188-229,B:313-360)
2d: CATH_3a8yA01 (A:-1-67,A:123-187,A:361-381)
3a: CATH_3a8yA04 (A:230-312)
3b: CATH_3a8yB04 (B:230-312)
4a: CATH_3a8yD00 (D:348-447)
4b: CATH_3a8yC00 (C:349-447)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Defensin A-like
(149)
Homologous Superfamily
:
[code=3.30.30.30, no name defined]
(60)
Human (Homo sapiens)
(15)
1a
3a8yA02
A:68-122
1b
3a8yB02
B:68-122
Topology
:
Nucleotidyltransferase; domain 5
(788)
Homologous Superfamily
:
[code=3.30.420.40, no name defined]
(217)
Human (Homo sapiens)
(36)
2a
3a8yB01
B:4-67,B:123-187,B:361-381
2b
3a8yA03
A:188-229,A:313-360
2c
3a8yB03
B:188-229,B:313-360
2d
3a8yA01
A:-1-67,A:123-187,A:361-381
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Actin; Chain A, domain 4
(156)
Homologous Superfamily
:
Actin; Chain A, domain 4
(155)
Human (Homo sapiens)
(29)
3a
3a8yA04
A:230-312
3b
3a8yB04
B:230-312
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Methane Monooxygenase Hydroxylase; Chain G, domain 1
(192)
Homologous Superfamily
:
[code=1.20.58.120, no name defined]
(13)
Human (Homo sapiens)
(8)
4a
3a8yD00
D:348-447
4b
3a8yC00
C:349-447
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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