PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
No precomputed SNP/Variant structure found.
Calculating the structure may take several minutes.
PLEASE WAIT...
Getting 'PROSITE' information from database.
PLEASE WAIT...
Getting 'Exon' information from database.
3A68
Asym. Unit
Info
Asym.Unit (928 KB)
Biol.Unit 1 (899 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
CRYSTAL STRUCTURE OF PLANT FERRITIN REVEALS A NOVEL METAL BINDING SITE THAT FUNCTIONS AS A TRANSIT SITE FOR METAL TRANSFER IN FERRITIN
Authors
:
T. Masuda, F. Goto, T. Yoshihara, B. Mikami
Date
:
26 Aug 09 (Deposition) - 08 Dec 09 (Release) - 09 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X (1x)
Keywords
:
4-Helix Bundle, Ferritin, Iron Storage, Cage-Like Protein, Plant, Chloroplast, Iron, Metal-Binding, Oxidoreductase, Plastid, Transit Peptide
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Masuda, F. Goto, T. Yoshihara, B. Mikami
Crystal Structure Of Plant Ferritin Reveals A Novel Metal Binding Site That Functions As A Transit Site For Metal Transfer In Ferritin
J. Biol. Chem. V. 285 4049 2010
[
close entry info
]
Hetero Components
(2, 154)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
1f: ACETIC ACID (ACYf)
1g: ACETIC ACID (ACYg)
1h: ACETIC ACID (ACYh)
1i: ACETIC ACID (ACYi)
1j: ACETIC ACID (ACYj)
1k: ACETIC ACID (ACYk)
1l: ACETIC ACID (ACYl)
1m: ACETIC ACID (ACYm)
1n: ACETIC ACID (ACYn)
1o: ACETIC ACID (ACYo)
1p: ACETIC ACID (ACYp)
1q: ACETIC ACID (ACYq)
1r: ACETIC ACID (ACYr)
2a: CALCIUM ION (CAa)
2aa: CALCIUM ION (CAaa)
2ab: CALCIUM ION (CAab)
2ac: CALCIUM ION (CAac)
2ad: CALCIUM ION (CAad)
2ae: CALCIUM ION (CAae)
2af: CALCIUM ION (CAaf)
2ag: CALCIUM ION (CAag)
2ah: CALCIUM ION (CAah)
2ai: CALCIUM ION (CAai)
2aj: CALCIUM ION (CAaj)
2ak: CALCIUM ION (CAak)
2al: CALCIUM ION (CAal)
2am: CALCIUM ION (CAam)
2an: CALCIUM ION (CAan)
2ao: CALCIUM ION (CAao)
2ap: CALCIUM ION (CAap)
2aq: CALCIUM ION (CAaq)
2ar: CALCIUM ION (CAar)
2as: CALCIUM ION (CAas)
2at: CALCIUM ION (CAat)
2au: CALCIUM ION (CAau)
2av: CALCIUM ION (CAav)
2aw: CALCIUM ION (CAaw)
2ax: CALCIUM ION (CAax)
2ay: CALCIUM ION (CAay)
2az: CALCIUM ION (CAaz)
2b: CALCIUM ION (CAb)
2ba: CALCIUM ION (CAba)
2bb: CALCIUM ION (CAbb)
2bc: CALCIUM ION (CAbc)
2bd: CALCIUM ION (CAbd)
2be: CALCIUM ION (CAbe)
2bf: CALCIUM ION (CAbf)
2bg: CALCIUM ION (CAbg)
2bh: CALCIUM ION (CAbh)
2bi: CALCIUM ION (CAbi)
2bj: CALCIUM ION (CAbj)
2bk: CALCIUM ION (CAbk)
2bl: CALCIUM ION (CAbl)
2bm: CALCIUM ION (CAbm)
2bn: CALCIUM ION (CAbn)
2bo: CALCIUM ION (CAbo)
2bp: CALCIUM ION (CAbp)
2bq: CALCIUM ION (CAbq)
2br: CALCIUM ION (CAbr)
2bs: CALCIUM ION (CAbs)
2bt: CALCIUM ION (CAbt)
2bu: CALCIUM ION (CAbu)
2bv: CALCIUM ION (CAbv)
2bw: CALCIUM ION (CAbw)
2bx: CALCIUM ION (CAbx)
2by: CALCIUM ION (CAby)
2bz: CALCIUM ION (CAbz)
2c: CALCIUM ION (CAc)
2ca: CALCIUM ION (CAca)
2cb: CALCIUM ION (CAcb)
2cc: CALCIUM ION (CAcc)
2cd: CALCIUM ION (CAcd)
2ce: CALCIUM ION (CAce)
2cf: CALCIUM ION (CAcf)
2cg: CALCIUM ION (CAcg)
2ch: CALCIUM ION (CAch)
2ci: CALCIUM ION (CAci)
2cj: CALCIUM ION (CAcj)
2ck: CALCIUM ION (CAck)
2cl: CALCIUM ION (CAcl)
2cm: CALCIUM ION (CAcm)
2cn: CALCIUM ION (CAcn)
2co: CALCIUM ION (CAco)
2cp: CALCIUM ION (CAcp)
2cq: CALCIUM ION (CAcq)
2cr: CALCIUM ION (CAcr)
2cs: CALCIUM ION (CAcs)
2ct: CALCIUM ION (CAct)
2cu: CALCIUM ION (CAcu)
2cv: CALCIUM ION (CAcv)
2cw: CALCIUM ION (CAcw)
2cx: CALCIUM ION (CAcx)
2cy: CALCIUM ION (CAcy)
2cz: CALCIUM ION (CAcz)
2d: CALCIUM ION (CAd)
2da: CALCIUM ION (CAda)
2db: CALCIUM ION (CAdb)
2dc: CALCIUM ION (CAdc)
2dd: CALCIUM ION (CAdd)
2de: CALCIUM ION (CAde)
2df: CALCIUM ION (CAdf)
2dg: CALCIUM ION (CAdg)
2dh: CALCIUM ION (CAdh)
2di: CALCIUM ION (CAdi)
2dj: CALCIUM ION (CAdj)
2dk: CALCIUM ION (CAdk)
2dl: CALCIUM ION (CAdl)
2dm: CALCIUM ION (CAdm)
2dn: CALCIUM ION (CAdn)
2do: CALCIUM ION (CAdo)
2dp: CALCIUM ION (CAdp)
2dq: CALCIUM ION (CAdq)
2dr: CALCIUM ION (CAdr)
2ds: CALCIUM ION (CAds)
2dt: CALCIUM ION (CAdt)
2du: CALCIUM ION (CAdu)
2dv: CALCIUM ION (CAdv)
2dw: CALCIUM ION (CAdw)
2dx: CALCIUM ION (CAdx)
2dy: CALCIUM ION (CAdy)
2dz: CALCIUM ION (CAdz)
2e: CALCIUM ION (CAe)
2ea: CALCIUM ION (CAea)
2eb: CALCIUM ION (CAeb)
2ec: CALCIUM ION (CAec)
2ed: CALCIUM ION (CAed)
2ee: CALCIUM ION (CAee)
2ef: CALCIUM ION (CAef)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
2k: CALCIUM ION (CAk)
2l: CALCIUM ION (CAl)
2m: CALCIUM ION (CAm)
2n: CALCIUM ION (CAn)
2o: CALCIUM ION (CAo)
2p: CALCIUM ION (CAp)
2q: CALCIUM ION (CAq)
2r: CALCIUM ION (CAr)
2s: CALCIUM ION (CAs)
2t: CALCIUM ION (CAt)
2u: CALCIUM ION (CAu)
2v: CALCIUM ION (CAv)
2w: CALCIUM ION (CAw)
2x: CALCIUM ION (CAx)
2y: CALCIUM ION (CAy)
2z: CALCIUM ION (CAz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACY
18
Ligand/Ion
ACETIC ACID
2
CA
136
Ligand/Ion
CALCIUM ION
[
close Hetero Component info
]
Sites
(154, 154)
Info
All Sites
001: AC1 (SOFTWARE)
002: AC2 (SOFTWARE)
003: AC3 (SOFTWARE)
004: AC4 (SOFTWARE)
005: AC5 (SOFTWARE)
006: AC6 (SOFTWARE)
007: AC7 (SOFTWARE)
008: AC8 (SOFTWARE)
009: AC9 (SOFTWARE)
010: BC1 (SOFTWARE)
011: BC2 (SOFTWARE)
012: BC3 (SOFTWARE)
013: BC4 (SOFTWARE)
014: BC5 (SOFTWARE)
015: BC6 (SOFTWARE)
016: BC7 (SOFTWARE)
017: BC8 (SOFTWARE)
018: BC9 (SOFTWARE)
019: CC1 (SOFTWARE)
020: CC2 (SOFTWARE)
021: CC3 (SOFTWARE)
022: CC4 (SOFTWARE)
023: CC5 (SOFTWARE)
024: CC6 (SOFTWARE)
025: CC7 (SOFTWARE)
026: CC8 (SOFTWARE)
027: CC9 (SOFTWARE)
028: DC1 (SOFTWARE)
029: DC2 (SOFTWARE)
030: DC3 (SOFTWARE)
031: DC4 (SOFTWARE)
032: DC5 (SOFTWARE)
033: DC6 (SOFTWARE)
034: DC7 (SOFTWARE)
035: DC8 (SOFTWARE)
036: DC9 (SOFTWARE)
037: EC1 (SOFTWARE)
038: EC2 (SOFTWARE)
039: EC3 (SOFTWARE)
040: EC4 (SOFTWARE)
041: EC5 (SOFTWARE)
042: EC6 (SOFTWARE)
043: EC7 (SOFTWARE)
044: EC8 (SOFTWARE)
045: EC9 (SOFTWARE)
046: FC1 (SOFTWARE)
047: FC2 (SOFTWARE)
048: FC3 (SOFTWARE)
049: FC4 (SOFTWARE)
050: FC5 (SOFTWARE)
051: FC6 (SOFTWARE)
052: FC7 (SOFTWARE)
053: FC8 (SOFTWARE)
054: FC9 (SOFTWARE)
055: GC1 (SOFTWARE)
056: GC2 (SOFTWARE)
057: GC3 (SOFTWARE)
058: GC4 (SOFTWARE)
059: GC5 (SOFTWARE)
060: GC6 (SOFTWARE)
061: GC7 (SOFTWARE)
062: GC8 (SOFTWARE)
063: GC9 (SOFTWARE)
064: HC1 (SOFTWARE)
065: HC2 (SOFTWARE)
066: HC3 (SOFTWARE)
067: HC4 (SOFTWARE)
068: HC5 (SOFTWARE)
069: HC6 (SOFTWARE)
070: HC7 (SOFTWARE)
071: HC8 (SOFTWARE)
072: HC9 (SOFTWARE)
073: IC1 (SOFTWARE)
074: IC2 (SOFTWARE)
075: IC3 (SOFTWARE)
076: IC4 (SOFTWARE)
077: IC5 (SOFTWARE)
078: IC6 (SOFTWARE)
079: IC7 (SOFTWARE)
080: IC8 (SOFTWARE)
081: IC9 (SOFTWARE)
082: JC1 (SOFTWARE)
083: JC2 (SOFTWARE)
084: JC3 (SOFTWARE)
085: JC4 (SOFTWARE)
086: JC5 (SOFTWARE)
087: JC6 (SOFTWARE)
088: JC7 (SOFTWARE)
089: JC8 (SOFTWARE)
090: JC9 (SOFTWARE)
091: KC1 (SOFTWARE)
092: KC2 (SOFTWARE)
093: KC3 (SOFTWARE)
094: KC4 (SOFTWARE)
095: KC5 (SOFTWARE)
096: KC6 (SOFTWARE)
097: KC7 (SOFTWARE)
098: KC8 (SOFTWARE)
099: KC9 (SOFTWARE)
100: LC1 (SOFTWARE)
101: LC2 (SOFTWARE)
102: LC3 (SOFTWARE)
103: LC4 (SOFTWARE)
104: LC5 (SOFTWARE)
105: LC6 (SOFTWARE)
106: LC7 (SOFTWARE)
107: LC8 (SOFTWARE)
108: LC9 (SOFTWARE)
109: MC1 (SOFTWARE)
110: MC2 (SOFTWARE)
111: MC3 (SOFTWARE)
112: MC4 (SOFTWARE)
113: MC5 (SOFTWARE)
114: MC6 (SOFTWARE)
115: MC7 (SOFTWARE)
116: MC8 (SOFTWARE)
117: MC9 (SOFTWARE)
118: NC1 (SOFTWARE)
119: NC2 (SOFTWARE)
120: NC3 (SOFTWARE)
121: NC4 (SOFTWARE)
122: NC5 (SOFTWARE)
123: NC6 (SOFTWARE)
124: NC7 (SOFTWARE)
125: NC8 (SOFTWARE)
126: NC9 (SOFTWARE)
127: OC1 (SOFTWARE)
128: OC2 (SOFTWARE)
129: OC3 (SOFTWARE)
130: OC4 (SOFTWARE)
131: OC5 (SOFTWARE)
132: OC6 (SOFTWARE)
133: OC7 (SOFTWARE)
134: OC8 (SOFTWARE)
135: OC9 (SOFTWARE)
136: PC1 (SOFTWARE)
137: PC2 (SOFTWARE)
138: PC3 (SOFTWARE)
139: PC4 (SOFTWARE)
140: PC5 (SOFTWARE)
141: PC6 (SOFTWARE)
142: PC7 (SOFTWARE)
143: PC8 (SOFTWARE)
144: PC9 (SOFTWARE)
145: QC1 (SOFTWARE)
146: QC2 (SOFTWARE)
147: QC3 (SOFTWARE)
148: QC4 (SOFTWARE)
149: QC5 (SOFTWARE)
150: QC6 (SOFTWARE)
151: QC7 (SOFTWARE)
152: QC8 (SOFTWARE)
153: QC9 (SOFTWARE)
154: RC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
001
AC1
SOFTWARE
HOH A:1176 , HOH A:2859 , HOH A:3218 , HOH A:4001 , HOH A:4002 , HOH A:4003 , HOH A:4683
BINDING SITE FOR RESIDUE CA A 213
002
AC2
SOFTWARE
GLU A:56 , GLU A:91 , HIS A:94 , HOH A:4004 , HOH A:4005 , HOH A:4006
BINDING SITE FOR RESIDUE CA A 214
003
AC3
SOFTWARE
THR A:168 , GLU A:173 , HOH A:1305 , HOH A:2544 , HOH A:4011 , HOH X:4010
BINDING SITE FOR RESIDUE CA A 215
004
AC4
SOFTWARE
GLU A:93 , GLU A:96 , HOH A:3462 , HOH A:4900 , HOH A:4901
BINDING SITE FOR RESIDUE CA A 216
005
AC5
SOFTWARE
ASP A:164 , GLU A:167 , HOH A:5001 , GLU H:167 , HOH H:5002 , HOH X:5004
BINDING SITE FOR RESIDUE CA A 351
006
AC6
SOFTWARE
GLU A:167 , HOH A:4971 , HOH H:5006 , HOH X:4970 , HOH X:5004 , HOH X:5005 , HOH X:5639
BINDING SITE FOR RESIDUE CA A 353
007
AC7
SOFTWARE
HOH A:1851 , HOH A:5616 , HOH A:5617 , HOH J:6273
BINDING SITE FOR RESIDUE CA A 401
008
AC8
SOFTWARE
ALA A:34 , SER A:35 , ARG A:38 , LYS A:108 , HOH A:679
BINDING SITE FOR RESIDUE ACY A 217
009
AC9
SOFTWARE
HOH B:1164 , HOH B:3178 , HOH B:4583 , HOH B:4584 , HOH B:4859 , HOH B:4899 , HOH B:6084
BINDING SITE FOR RESIDUE CA B 213
010
BC1
SOFTWARE
GLU B:56 , GLU B:91 , HIS B:94 , HOH B:859 , HOH B:1451 , HOH B:4012
BINDING SITE FOR RESIDUE CA B 214
011
BC2
SOFTWARE
THR B:168 , GLU B:173 , HOH B:4021 , HOH B:4022 , HOH B:4023 , HOH E:1890
BINDING SITE FOR RESIDUE CA B 215
012
BC3
SOFTWARE
GLU B:93 , GLU B:96 , HOH B:4903 , HOH B:4905 , HOH F:6083
BINDING SITE FOR RESIDUE CA B 216
013
BC4
SOFTWARE
HOH B:2290 , HOH B:4485 , HOH B:5247 , HOH I:6194
BINDING SITE FOR RESIDUE CA B 402
014
BC5
SOFTWARE
HOH C:2257 , HOH C:3518 , HOH C:4024 , HOH C:4026 , HOH C:4709 , HOH C:4874
BINDING SITE FOR RESIDUE CA C 213
015
BC6
SOFTWARE
GLU C:56 , GLU C:91 , HIS C:94 , HOH C:1127 , HOH C:2366 , HOH C:4027
BINDING SITE FOR RESIDUE CA C 214
016
BC7
SOFTWARE
THR C:168 , GLU C:173 , HOH C:1774 , HOH C:1983 , HOH C:4033 , HOH C:4495
BINDING SITE FOR RESIDUE CA C 215
017
BC8
SOFTWARE
GLU C:93 , GLU C:96 , HOH C:4591 , HOH C:4907
BINDING SITE FOR RESIDUE CA C 216
018
BC9
SOFTWARE
GLU C:167 , HOH C:5021 , ASP R:164 , HOH R:5023 , ASP S:164 , GLU S:167 , HOH S:5171
BINDING SITE FOR RESIDUE CA C 321
019
CC1
SOFTWARE
GLU C:167 , HOH C:5173 , HOH C:5177 , HOH C:5270 , HOH R:5176 , HOH R:5672 , HOH S:5174
BINDING SITE FOR RESIDUE CA C 323
020
CC2
SOFTWARE
HOH C:2707 , HOH C:5469 , HOH C:5470 , HOH M:5471
BINDING SITE FOR RESIDUE CA C 403
021
CC3
SOFTWARE
GLU D:56 , GLU D:91 , HIS D:94 , HOH D:310 , HOH D:1173 , HOH D:1574
BINDING SITE FOR RESIDUE CA D 213
022
CC4
SOFTWARE
THR D:168 , GLU D:173 , HOH D:4048 , HOH D:4212 , HOH D:4881 , HOH W:4049
BINDING SITE FOR RESIDUE CA D 214
023
CC5
SOFTWARE
GLU D:93 , GLU D:96 , HOH D:6051
BINDING SITE FOR RESIDUE CA D 215
024
CC6
SOFTWARE
ASP D:164 , GLU D:167 , HOH D:5225 , GLU I:167 , HOH I:5032 , HOH I:5083 , ASP W:164 , HOH W:5227
BINDING SITE FOR RESIDUE CA D 331
025
CC7
SOFTWARE
HOH D:2181 , HOH D:5690 , HOH D:6046 , HOH K:5691
BINDING SITE FOR RESIDUE CA D 404
026
CC8
SOFTWARE
HOH E:1647 , HOH E:2085 , HOH E:2626 , HOH E:2701 , HOH E:2781 , HOH E:3293 , HOH E:4052
BINDING SITE FOR RESIDUE CA E 213
027
CC9
SOFTWARE
GLU E:56 , GLU E:91 , HIS E:94 , HOH E:1115 , HOH E:1456 , HOH E:4051
BINDING SITE FOR RESIDUE CA E 214
028
DC1
SOFTWARE
THR E:168 , GLU E:173 , HOH E:2966 , HOH E:4054 , HOH E:4055 , HOH V:5211
BINDING SITE FOR RESIDUE CA E 215
029
DC2
SOFTWARE
GLU E:93 , GLU E:96 , HOH E:4596 , HOH E:4912 , GLU I:89 , HOH I:6246
BINDING SITE FOR RESIDUE CA E 216
030
DC3
SOFTWARE
GLU B:167 , HOH B:5011 , HOH B:5013 , ASP E:164 , GLU E:167 , HOH E:5215 , ASP V:164
BINDING SITE FOR RESIDUE CA E 311
031
DC4
SOFTWARE
GLU B:167 , HOH B:5048 , HOH B:5213 , GLU E:167 , HOH E:5046 , HOH E:5216 , HOH V:5217
BINDING SITE FOR RESIDUE CA E 312
032
DC5
SOFTWARE
HOH E:1482 , HOH E:5353 , HOH L:6237
BINDING SITE FOR RESIDUE CA E 405
033
DC6
SOFTWARE
ALA E:34 , SER E:35 , ARG E:38 , LYS E:108 , HOH E:905 , HOH E:3293 , HOH E:5993
BINDING SITE FOR RESIDUE ACY E 217
034
DC7
SOFTWARE
HOH F:2825 , HOH F:3952 , HOH F:4056 , HOH F:4057 , HOH F:4058 , HOH F:4059 , HOH F:4505
BINDING SITE FOR RESIDUE CA F 213
035
DC8
SOFTWARE
GLU F:56 , GLU F:91 , HIS F:94 , HOH F:1660 , HOH F:2352 , HOH F:2519
BINDING SITE FOR RESIDUE CA F 214
036
DC9
SOFTWARE
THR F:168 , GLU F:173 , HOH F:1383 , HOH F:4064 , HOH F:4066 , HOH O:4065
BINDING SITE FOR RESIDUE CA F 215
037
EC1
SOFTWARE
HOH B:4916 , GLU F:93 , GLU F:96 , HOH F:4917 , HOH F:5319
BINDING SITE FOR RESIDUE CA F 216
038
EC2
SOFTWARE
HOH C:5335 , HOH F:2340 , HOH F:4508 , HOH F:5334
BINDING SITE FOR RESIDUE CA F 406
039
EC3
SOFTWARE
ALA F:34 , SER F:35 , ARG F:38 , HOH F:1107 , HOH F:4505
BINDING SITE FOR RESIDUE ACY F 217
040
EC4
SOFTWARE
HOH G:1488 , HOH G:4067 , HOH G:4068 , HOH G:4069 , HOH G:4604 , HOH G:4898 , HOH G:5364
BINDING SITE FOR RESIDUE CA G 213
041
EC5
SOFTWARE
GLU G:56 , GLU G:91 , HIS G:94 , HOH G:1432 , HOH G:2586 , HOH G:4070
BINDING SITE FOR RESIDUE CA G 214
042
EC6
SOFTWARE
HOH F:1670 , THR G:168 , GLU G:173 , HOH G:2360 , HOH G:4071 , HOH G:4072
BINDING SITE FOR RESIDUE CA G 215
043
EC7
SOFTWARE
HOH A:4920 , GLU G:93 , GLU G:96 , HOH G:4232 , HOH G:4919
BINDING SITE FOR RESIDUE CA G 216
044
EC8
SOFTWARE
HOH B:5647 , HOH G:1910 , HOH G:3315 , HOH G:5240 , HOH G:5648
BINDING SITE FOR RESIDUE CA G 407
045
EC9
SOFTWARE
ALA G:34 , SER G:35 , ARG G:38 , LYS G:108 , HOH G:1180
BINDING SITE FOR RESIDUE ACY G 217
046
FC1
SOFTWARE
HOH H:299 , HOH H:2857 , HOH H:3110 , HOH H:3264 , HOH H:3707 , HOH H:4073 , HOH H:4738
BINDING SITE FOR RESIDUE CA H 213
047
FC2
SOFTWARE
GLU H:56 , GLU H:91 , HIS H:94 , HOH H:2162 , HOH H:4074 , HOH H:4075
BINDING SITE FOR RESIDUE CA H 214
048
FC3
SOFTWARE
HOH A:4080 , THR H:168 , GLU H:173 , HOH H:1330 , HOH H:4078 , HOH H:4079
BINDING SITE FOR RESIDUE CA H 215
049
FC4
SOFTWARE
GLU H:93 , GLU H:96 , HOH H:4243 , HOH H:5686
BINDING SITE FOR RESIDUE CA H 216
050
FC5
SOFTWARE
HOH G:5711 , HOH H:1535 , HOH H:5361 , HOH H:5408 , HOH H:6031
BINDING SITE FOR RESIDUE CA H 408
051
FC6
SOFTWARE
ALA H:34 , SER H:35 , ARG H:38 , HOH H:1608 , HOH H:2857
BINDING SITE FOR RESIDUE ACY H 217
052
FC7
SOFTWARE
HOH I:2824 , HOH I:3818 , HOH I:4082 , HOH I:4083 , HOH I:4762 , HOH I:4763 , HOH I:4852
BINDING SITE FOR RESIDUE CA I 213
053
FC8
SOFTWARE
GLU I:56 , GLU I:91 , HIS I:94 , HOH I:2554 , HOH I:4084 , HOH I:4085
BINDING SITE FOR RESIDUE CA I 214
054
FC9
SOFTWARE
HOH D:2441 , THR I:168 , GLU I:173 , HOH I:2009 , HOH I:4092 , HOH I:4526
BINDING SITE FOR RESIDUE CA I 215
055
GC1
SOFTWARE
GLU I:93 , GLU I:96 , HOH I:4923 , HOH I:4925 , HOH I:6214
BINDING SITE FOR RESIDUE CA I 216
056
GC2
SOFTWARE
HOH D:5036 , HOH D:5226 , GLU I:167 , HOH I:5034 , HOH I:5087 , HOH I:5301 , HOH W:5227
BINDING SITE FOR RESIDUE CA I 332
057
GC3
SOFTWARE
HOH H:3863 , HOH I:2450 , HOH I:4209 , HOH I:5386
BINDING SITE FOR RESIDUE CA I 409
058
GC4
SOFTWARE
ALA I:34 , SER I:35 , ARG I:38 , LYS I:108 , HOH I:2536
BINDING SITE FOR RESIDUE ACY I 217
059
GC5
SOFTWARE
HOH J:1374 , HOH J:1848 , HOH J:3587 , HOH J:4093 , HOH J:4652 , HOH J:4653 , HOH J:4654
BINDING SITE FOR RESIDUE CA J 213
060
GC6
SOFTWARE
GLU J:56 , GLU J:91 , HIS J:94 , HOH J:1085 , HOH J:1465 , HOH J:1887
BINDING SITE FOR RESIDUE CA J 214
061
GC7
SOFTWARE
THR J:168 , GLU J:173 , HOH J:1640 , HOH J:2150 , HOH J:4099 , HOH N:4100
BINDING SITE FOR RESIDUE CA J 215
062
GC8
SOFTWARE
GLU J:93 , GLU J:96 , HOH J:1882 , HOH J:4927 , HOH X:4926
BINDING SITE FOR RESIDUE CA J 216
063
GC9
SOFTWARE
ASP J:164 , GLU J:167 , GLU N:167 , CA N:361 , GLU Q:167 , CA Q:363 , HOH Q:5133
BINDING SITE FOR RESIDUE CA J 362
064
HC1
SOFTWARE
HOH J:1872 , HOH J:2971 , HOH J:5759 , HOH R:5955
BINDING SITE FOR RESIDUE CA J 410
065
HC2
SOFTWARE
ALA J:34 , SER J:35 , ARG J:38 , LYS J:108 , HOH J:842 , HOH J:3587
BINDING SITE FOR RESIDUE ACY J 217
066
HC3
SOFTWARE
HOH K:3939 , HOH K:4101 , HOH K:4102 , HOH K:4691 , HOH K:4878 , HOH K:4879 , HOH K:4880
BINDING SITE FOR RESIDUE CA K 213
067
HC4
SOFTWARE
GLU K:56 , GLU K:91 , HIS K:94 , HOH K:804 , HOH K:4104 , HOH K:4875
BINDING SITE FOR RESIDUE CA K 214
068
HC5
SOFTWARE
THR K:168 , GLU K:173 , HOH K:2413 , HOH K:4110 , HOH K:6271 , HOH U:4166
BINDING SITE FOR RESIDUE CA K 215
069
HC6
SOFTWARE
GLU K:93 , GLU K:96 , HOH K:4269 , HOH K:4929 , HOH W:4928 , HOH W:4930
BINDING SITE FOR RESIDUE CA K 216
070
HC7
SOFTWARE
GLU K:167 , HOH K:5103 , HOH K:5203 , HOH U:5207
BINDING SITE FOR RESIDUE CA K 371
071
HC8
SOFTWARE
GLU K:167 , ASP P:164 , HOH P:5445 , ASP U:164 , GLU U:167 , HOH U:5201 , HOH U:5205
BINDING SITE FOR RESIDUE CA K 373
072
HC9
SOFTWARE
HOH K:1581 , HOH K:4536 , HOH K:5570 , HOH Q:1318
BINDING SITE FOR RESIDUE CA K 411
073
IC1
SOFTWARE
HOH L:3987 , HOH L:3999 , HOH L:4000 , HOH L:4111 , HOH L:4112 , HOH L:4113 , HOH L:4278
BINDING SITE FOR RESIDUE CA L 213
074
IC2
SOFTWARE
GLU L:56 , GLU L:91 , HIS L:94 , HOH L:2350 , HOH L:4114 , HOH L:5785
BINDING SITE FOR RESIDUE CA L 214
075
IC3
SOFTWARE
THR L:168 , GLU L:173 , HOH L:4121 , HOH L:4122 , HOH L:4820 , HOH T:4819
BINDING SITE FOR RESIDUE CA L 215
076
IC4
SOFTWARE
GLU L:93 , GLU L:96 , HOH L:4931 , HOH L:4932
BINDING SITE FOR RESIDUE CA L 216
077
IC5
SOFTWARE
ASP L:164 , GLU L:167 , HOH L:4119 , GLU M:167 , HOH M:5192 , ASP T:164 , HOH T:5121
BINDING SITE FOR RESIDUE CA L 381
078
IC6
SOFTWARE
GLU L:167 , HOH L:5123 , HOH L:5196 , GLU M:167 , HOH M:5114 , HOH T:5195
BINDING SITE FOR RESIDUE CA L 382
079
IC7
SOFTWARE
HOH L:1918 , HOH L:2560 , HOH L:5515 , HOH P:1199
BINDING SITE FOR RESIDUE CA L 412
080
IC8
SOFTWARE
ALA L:34 , SER L:35 , ARG L:38 , LYS L:108 , HOH L:955 , HOH L:4278
BINDING SITE FOR RESIDUE ACY L 217
081
IC9
SOFTWARE
HOH M:4123 , HOH M:4124 , HOH M:4125 , HOH M:4126 , HOH M:4127 , HOH M:4656 , HOH M:4887
BINDING SITE FOR RESIDUE CA M 213
082
JC1
SOFTWARE
GLU M:56 , GLU M:91 , HIS M:94 , HOH M:2451 , HOH M:4128 , HOH M:4129
BINDING SITE FOR RESIDUE CA M 214
083
JC2
SOFTWARE
HOH L:4131 , THR M:168 , GLU M:173 , HOH M:1070 , HOH M:2916 , HOH M:4132
BINDING SITE FOR RESIDUE CA M 215
084
JC3
SOFTWARE
GLU M:93 , GLU M:96 , HOH M:3095
BINDING SITE FOR RESIDUE CA M 216
085
JC4
SOFTWARE
HOH M:1789 , HOH M:4302 , HOH M:4546 , HOH V:3876 , HOH V:5963
BINDING SITE FOR RESIDUE CA M 413
086
JC5
SOFTWARE
ALA M:34 , SER M:35 , ARG M:38 , LYS M:108 , HOH M:871 , HOH M:4656
BINDING SITE FOR RESIDUE ACY M 217
087
JC6
SOFTWARE
HOH N:2433 , HOH N:4133 , HOH N:4548 , HOH N:4800 , HOH N:4801 , HOH N:4802 , HOH N:4888
BINDING SITE FOR RESIDUE CA N 213
088
JC7
SOFTWARE
GLU N:56 , GLU N:91 , HIS N:94 , HOH N:1964 , HOH N:2558 , HOH N:4134
BINDING SITE FOR RESIDUE CA N 214
089
JC8
SOFTWARE
THR N:168 , GLU N:173 , HOH N:2924 , HOH N:3399 , HOH N:3656 , HOH Q:3489
BINDING SITE FOR RESIDUE CA N 215
090
JC9
SOFTWARE
GLU N:93 , GLU N:96 , HOH N:2139 , HOH N:4935 , HOH R:4936
BINDING SITE FOR RESIDUE CA N 216
091
KC1
SOFTWARE
CA J:362 , HOH J:5164 , HOH J:5166 , GLU N:167 , HOH N:5137 , HOH Q:5133 , HOH Q:5756
BINDING SITE FOR RESIDUE CA N 361
092
KC2
SOFTWARE
HOH N:1737 , HOH N:4314 , HOH N:5506 , HOH U:4315
BINDING SITE FOR RESIDUE CA N 414
093
KC3
SOFTWARE
HOH O:2553 , HOH O:3386 , HOH O:3974 , HOH O:4138 , HOH O:4139 , HOH O:4140 , HOH O:4141
BINDING SITE FOR RESIDUE CA O 213
094
KC4
SOFTWARE
GLU O:56 , GLU O:91 , HIS O:94 , HOH O:731 , HOH O:2070 , HOH O:4142
BINDING SITE FOR RESIDUE CA O 214
095
KC5
SOFTWARE
HOH G:2182 , THR O:168 , GLU O:173 , HOH O:1807 , HOH O:2830 , HOH O:4143
BINDING SITE FOR RESIDUE CA O 215
096
KC6
SOFTWARE
HOH C:4939 , HOH C:4940 , GLU O:93 , GLU O:96 , HOH O:1236 , HOH O:4938
BINDING SITE FOR RESIDUE CA O 216
097
KC7
SOFTWARE
GLU F:167 , HOH F:5051 , ASP G:164 , HOH G:5141 , HOH G:5142 , ASP O:164 , GLU O:167
BINDING SITE FOR RESIDUE CA O 341
098
KC8
SOFTWARE
HOH F:5064 , HOH F:5067 , HOH G:5054 , HOH G:5146 , HOH G:5147 , GLU O:167 , HOH O:1974
BINDING SITE FOR RESIDUE CA O 342
099
KC9
SOFTWARE
HOH A:6137 , HOH O:2437 , HOH O:5512 , HOH O:5513
BINDING SITE FOR RESIDUE CA O 415
100
LC1
SOFTWARE
ALA O:34 , SER O:35 , ARG O:38 , HOH O:1371
BINDING SITE FOR RESIDUE ACY O 217
101
LC2
SOFTWARE
HOH P:2262 , HOH P:2727 , HOH P:3177 , HOH P:4144 , HOH P:4145 , HOH P:4344 , HOH P:4877
BINDING SITE FOR RESIDUE CA P 213
102
LC3
SOFTWARE
GLU P:56 , GLU P:91 , HIS P:94 , HOH P:1757 , HOH P:4146 , HOH P:4147
BINDING SITE FOR RESIDUE CA P 214
103
LC4
SOFTWARE
HOH K:4109 , THR P:168 , GLU P:173 , HOH P:1871 , HOH P:3619 , HOH P:4108
BINDING SITE FOR RESIDUE CA P 215
104
LC5
SOFTWARE
GLU P:93 , GLU P:96 , HOH P:4942 , HOH P:4943 , HOH T:4941
BINDING SITE FOR RESIDUE CA P 216
105
LC6
SOFTWARE
HOH P:2919 , HOH P:3910 , HOH P:5520 , HOH W:5924
BINDING SITE FOR RESIDUE CA P 416
106
LC7
SOFTWARE
ALA P:34 , SER P:35 , ARG P:38 , LYS P:108 , HOH P:1292 , HOH P:4344
BINDING SITE FOR RESIDUE ACY P 217
107
LC8
SOFTWARE
HOH Q:1504 , HOH Q:2252 , HOH Q:2333 , HOH Q:4148 , HOH Q:4810 , HOH Q:4811
BINDING SITE FOR RESIDUE CA Q 213
108
LC9
SOFTWARE
GLU Q:56 , GLU Q:91 , HIS Q:94 , HOH Q:1553 , HOH Q:4149 , HOH Q:4150
BINDING SITE FOR RESIDUE CA Q 214
109
MC1
SOFTWARE
HOH J:4868 , THR Q:168 , GLU Q:173 , HOH Q:3432 , HOH Q:3636 , HOH Q:4368
BINDING SITE FOR RESIDUE CA Q 215
110
MC2
SOFTWARE
GLU Q:93 , GLU Q:96 , HOH Q:4944 , HOH Q:4945 , HOH Q:4946
BINDING SITE FOR RESIDUE CA Q 216
111
MC3
SOFTWARE
ASP J:164 , CA J:362 , HOH J:4096 , GLU N:167 , HOH N:5091 , ASP Q:164 , GLU Q:167 , HOH Q:5092
BINDING SITE FOR RESIDUE CA Q 363
112
MC4
SOFTWARE
HOH Q:1753 , HOH Q:5535 , HOH Q:5536 , HOH Q:6274 , HOH X:5844
BINDING SITE FOR RESIDUE CA Q 417
113
MC5
SOFTWARE
ALA Q:34 , SER Q:35 , HOH Q:428 , HOH Q:4811
BINDING SITE FOR RESIDUE ACY Q 217
114
MC6
SOFTWARE
HOH R:1094 , HOH R:1739 , HOH R:2816 , HOH R:2899 , HOH R:4153 , HOH R:4154 , HOH R:4889
BINDING SITE FOR RESIDUE CA R 213
115
MC7
SOFTWARE
GLU R:56 , GLU R:91 , HIS R:94 , HOH R:1333 , HOH R:1408 , HOH R:4155
BINDING SITE FOR RESIDUE CA R 214
116
MC8
SOFTWARE
HOH C:4204 , THR R:168 , GLU R:173 , HOH R:1259 , HOH R:1498 , HOH R:1944
BINDING SITE FOR RESIDUE CA R 215
117
MC9
SOFTWARE
GLU R:93 , GLU R:96 , HOH R:4615
BINDING SITE FOR RESIDUE CA R 216
118
NC1
SOFTWARE
HOH O:6001 , HOH R:2550 , HOH R:4321 , HOH R:5259
BINDING SITE FOR RESIDUE CA R 418
119
NC2
SOFTWARE
ALA R:34 , SER R:35 , ARG R:38 , LYS R:108 , HOH R:678 , HOH R:2899
BINDING SITE FOR RESIDUE ACY R 217
120
NC3
SOFTWARE
HOH S:879 , HOH S:4160 , HOH S:4655 , HOH S:4891 , HOH S:4892 , HOH S:6077 , HOH S:6244
BINDING SITE FOR RESIDUE CA S 213
121
NC4
SOFTWARE
GLU S:56 , GLU S:91 , HIS S:94 , HOH S:218 , HOH S:1251 , HOH S:2537
BINDING SITE FOR RESIDUE CA S 214
122
NC5
SOFTWARE
HOH R:2176 , THR S:168 , GLU S:173 , HOH S:1434 , HOH S:2551 , HOH S:4159
BINDING SITE FOR RESIDUE CA S 215
123
NC6
SOFTWARE
GLU S:93 , GLU S:96 , HOH S:1467 , HOH S:4951
BINDING SITE FOR RESIDUE CA S 216
124
NC7
SOFTWARE
HOH N:5875 , HOH N:5952 , HOH N:6127 , HOH S:1829 , HOH S:5876 , HOH S:6044
BINDING SITE FOR RESIDUE CA S 419
125
NC8
SOFTWARE
ALA S:34 , SER S:35 , ARG S:38 , LYS S:108 , HOH S:784 , HOH S:4892 , HOH S:6244
BINDING SITE FOR RESIDUE ACY S 217
126
NC9
SOFTWARE
HOH T:1873 , HOH T:2060 , HOH T:2229 , HOH T:4162 , HOH T:4346 , HOH T:4795 , HOH T:5553
BINDING SITE FOR RESIDUE CA T 213
127
OC1
SOFTWARE
GLU T:56 , GLU T:91 , HIS T:94 , HOH T:2752 , HOH T:3055 , HOH T:4163
BINDING SITE FOR RESIDUE CA T 214
128
OC2
SOFTWARE
HOH M:1896 , HOH M:4568 , THR T:168 , GLU T:173 , HOH T:1810 , HOH T:4164
BINDING SITE FOR RESIDUE CA T 215
129
OC3
SOFTWARE
GLU T:93 , GLU T:96 , HOH T:4567 , HOH T:4952
BINDING SITE FOR RESIDUE CA T 216
130
OC4
SOFTWARE
HOH S:5882 , HOH T:2462 , HOH T:4297 , HOH T:5881
BINDING SITE FOR RESIDUE CA T 420
131
OC5
SOFTWARE
ALA T:34 , SER T:35 , ARG T:38 , LYS T:108 , HOH T:1764 , HOH T:4795
BINDING SITE FOR RESIDUE ACY T 217
132
OC6
SOFTWARE
GLU U:56 , GLU U:91 , HIS U:94 , HOH U:451 , HOH U:1705 , HOH U:1779
BINDING SITE FOR RESIDUE CA U 213
133
OC7
SOFTWARE
HOH P:3769 , THR U:168 , GLU U:173 , HOH U:2714 , HOH U:4167 , HOH U:4850
BINDING SITE FOR RESIDUE CA U 214
134
OC8
SOFTWARE
HOH Q:4954 , HOH Q:4955 , GLU U:93 , GLU U:96 , HOH U:4953 , HOH U:4956
BINDING SITE FOR RESIDUE CA U 215
135
OC9
SOFTWARE
HOH T:5562 , HOH U:1377 , HOH U:5560 , HOH U:5561
BINDING SITE FOR RESIDUE CA U 421
136
PC1
SOFTWARE
HOH V:3306 , HOH V:3953 , HOH V:3970 , HOH V:3977 , HOH V:4168 , HOH V:4169 , HOH V:4867
BINDING SITE FOR RESIDUE CA V 221
137
PC2
SOFTWARE
GLU V:56 , GLU V:91 , HIS V:94 , HOH V:4170 , HOH V:4171 , HOH V:4172
BINDING SITE FOR RESIDUE CA V 222
138
PC3
SOFTWARE
HOH B:4484 , THR V:168 , GLU V:173 , HOH V:1430 , HOH V:1560 , HOH V:4174
BINDING SITE FOR RESIDUE CA V 223
139
PC4
SOFTWARE
GLU V:93 , GLU V:96 , HOH V:1888
BINDING SITE FOR RESIDUE CA V 224
140
PC5
SOFTWARE
HOH V:2066 , HOH V:5701 , HOH V:5702 , HOH V:6060
BINDING SITE FOR RESIDUE CA V 422
141
PC6
SOFTWARE
ALA V:34 , SER V:35 , ARG V:38 , LYS V:108 , HOH V:914
BINDING SITE FOR RESIDUE ACY V 213
142
PC7
SOFTWARE
HOH W:2175 , HOH W:2247 , HOH W:2566 , HOH W:3325 , HOH W:3349 , HOH W:3928 , HOH W:4177
BINDING SITE FOR RESIDUE CA W 231
143
PC8
SOFTWARE
GLU W:56 , GLU W:91 , HIS W:94 , HOH W:1593 , HOH W:2556 , HOH W:4178
BINDING SITE FOR RESIDUE CA W 232
144
PC9
SOFTWARE
THR W:168 , GLU W:173 , HOH W:1351 , HOH W:1990 , HOH W:4086 , HOH W:4087
BINDING SITE FOR RESIDUE CA W 233
145
QC1
SOFTWARE
GLU W:93 , GLU W:96 , HOH W:4454
BINDING SITE FOR RESIDUE CA W 234
146
QC2
SOFTWARE
HOH E:5977 , HOH E:6268 , HOH W:1284 , HOH W:3153 , HOH W:5695
BINDING SITE FOR RESIDUE CA W 423
147
QC3
SOFTWARE
ALA W:34 , SER W:35 , ARG W:38 , LYS W:108 , HOH W:1214 , HOH W:3325
BINDING SITE FOR RESIDUE ACY W 213
148
QC4
SOFTWARE
HOH X:1349 , HOH X:3112 , HOH X:3269 , HOH X:3959 , HOH X:4179 , HOH X:4180 , HOH X:4893
BINDING SITE FOR RESIDUE CA X 241
149
QC5
SOFTWARE
GLU X:56 , GLU X:91 , HIS X:94 , HOH X:1653 , HOH X:1988 , HOH X:4181
BINDING SITE FOR RESIDUE CA X 242
150
QC6
SOFTWARE
HOH H:2651 , THR X:168 , GLU X:173 , HOH X:1685 , HOH X:4076 , HOH X:4077
BINDING SITE FOR RESIDUE CA X 243
151
QC7
SOFTWARE
HOH J:4963 , GLU X:93 , GLU X:96 , HOH X:4645 , HOH X:4961 , HOH X:4962
BINDING SITE FOR RESIDUE CA X 244
152
QC8
SOFTWARE
GLU A:167 , HOH A:5001 , ASP H:164 , HOH H:5002 , ASP X:164 , GLU X:167 , HOH X:5004
BINDING SITE FOR RESIDUE CA X 352
153
QC9
SOFTWARE
HOH D:5286 , HOH X:1920 , HOH X:5619 , HOH X:5620
BINDING SITE FOR RESIDUE CA X 424
154
RC1
SOFTWARE
ALA X:34 , SER X:35 , ARG X:38 , LYS X:108 , HOH X:1336 , HOH X:3112
BINDING SITE FOR RESIDUE ACY X 213
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 48)
Info
All PROSITE Patterns/Profiles
1: FERRITIN_LIKE (A:39-192,B:39-192,C:39-192,D:39-19...)
2: FERRITIN_2 (A:159-179,B:159-179,C:159-179,D:15...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FERRITIN_LIKE
PS50905
Ferritin-like diiron domain profile.
FRI4_SOYBN
74-227
24
A:39-192
B:39-192
C:39-192
D:39-192
E:39-192
F:39-192
G:39-192
H:39-192
I:39-192
J:39-192
K:39-192
L:39-192
M:39-192
N:39-192
O:39-192
P:39-192
Q:39-192
R:39-192
S:39-192
T:39-192
U:39-192
V:39-192
W:39-192
X:39-192
2
FERRITIN_2
PS00204
Ferritin iron-binding regions signature 2.
FRI4_SOYBN
194-214
24
A:159-179
B:159-179
C:159-179
D:159-179
E:159-179
F:159-179
G:159-179
H:159-179
I:159-179
J:159-179
K:159-179
L:159-179
M:159-179
N:159-179
O:159-179
P:159-179
Q:159-179
R:159-179
S:159-179
T:159-179
U:159-179
V:159-179
W:159-179
X:159-179
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(1, 24)
Info
all CATH domains
1a: CATH_3a68E00 (E:18-207)
1b: CATH_3a68H00 (H:15-207)
1c: CATH_3a68L00 (L:15-207)
1d: CATH_3a68A00 (A:14-207)
1e: CATH_3a68B00 (B:14-207)
1f: CATH_3a68D00 (D:14-207)
1g: CATH_3a68F00 (F:14-207)
1h: CATH_3a68G00 (G:14-207)
1i: CATH_3a68I00 (I:14-207)
1j: CATH_3a68J00 (J:14-207)
1k: CATH_3a68K00 (K:14-207)
1l: CATH_3a68M00 (M:14-207)
1m: CATH_3a68N00 (N:14-207)
1n: CATH_3a68O00 (O:14-207)
1o: CATH_3a68P00 (P:14-207)
1p: CATH_3a68Q00 (Q:14-207)
1q: CATH_3a68S00 (S:14-207)
1r: CATH_3a68T00 (T:14-207)
1s: CATH_3a68U00 (U:14-207)
1t: CATH_3a68V00 (V:14-207)
1u: CATH_3a68W00 (W:14-207)
1v: CATH_3a68X00 (X:14-207)
1w: CATH_3a68C00 (C:13-208)
1x: CATH_3a68R00 (R:12-207)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Ferritin;
(180)
Homologous Superfamily
:
[code=1.20.1260.10, no name defined]
(180)
Soybeans (Glycine max)
(2)
1a
3a68E00
E:18-207
1b
3a68H00
H:15-207
1c
3a68L00
L:15-207
1d
3a68A00
A:14-207
1e
3a68B00
B:14-207
1f
3a68D00
D:14-207
1g
3a68F00
F:14-207
1h
3a68G00
G:14-207
1i
3a68I00
I:14-207
1j
3a68J00
J:14-207
1k
3a68K00
K:14-207
1l
3a68M00
M:14-207
1m
3a68N00
N:14-207
1n
3a68O00
O:14-207
1o
3a68P00
P:14-207
1p
3a68Q00
Q:14-207
1q
3a68S00
S:14-207
1r
3a68T00
T:14-207
1s
3a68U00
U:14-207
1t
3a68V00
V:14-207
1u
3a68W00
W:14-207
1v
3a68X00
X:14-207
1w
3a68C00
C:13-208
1x
3a68R00
R:12-207
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Chain C
Chain D
Chain E
Chain F
Chain G
Chain H
Chain I
Chain J
Chain K
Chain L
Chain M
Chain N
Chain O
Chain P
Chain Q
Chain R
Chain S
Chain T
Chain U
Chain V
Chain W
Chain X
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (928 KB)
Header - Asym.Unit
Biol.Unit 1 (899 KB)
Header - Biol.Unit 1
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
3A68
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help