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2ZUB
Asym. Unit
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Asym.Unit (99 KB)
Biol.Unit 1 (94 KB)
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(1)
Title
:
LEFT HANDED RADA
Authors
:
Y. W. Chang, T. P. Ko, T. F. Wang, A. H. J. Wang
Date
:
15 Oct 08 (Deposition) - 07 Apr 09 (Release) - 07 Apr 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Archaea, Filament, Left-Handed, Dna Binding, Recombination, Molecular Switch, Reca, Rad51, Dmc1, Atp-Binding, Dna Damage, Dna Recombination, Dna-Binding, Nucleotide-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. W. Chang, T. P. Ko, C. D. Lee, Y. C. Chang, K. A. Lin, C. S. Chang, A. H. J. Wang, T. F. Wang
Three New Structures Of Left-Handed Rada Helical Filaments: Structural Flexibility Of N-Terminal Domain Is Critical For Recombinase Activity
Plos One V. 4 E4890 2009
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 4)
Info
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1: RECA_2 (A:85-257,B:85-257)
2: RECA_3 (A:279-322,B:279-322)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RECA_2
PS50162
RecA family profile 1.
RADA_SULSO
85-257
2
A:85-257
B:85-257
2
RECA_3
PS50163
RecA family profile 2.
RADA_SULSO
262-324
2
A:279-322
B:279-322
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2zuba1 (A:13-72)
1b: SCOP_d2zubb1 (B:13-72)
2a: SCOP_d2zuba2 (A:73-322)
2b: SCOP_d2zubb2 (B:73-322)
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Protein Domains
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(
)
Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
Rad51 N-terminal domain-like
(25)
Family
:
DNA repair protein Rad51, N-terminal domain
(16)
Protein domain
:
DNA repair protein Rad51, N-terminal domain
(16)
Sulfolobus solfataricus [TaxId: 2287]
(2)
1a
d2zuba1
A:13-72
1b
d2zubb1
B:13-72
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
RecA protein-like (ATPase-domain)
(159)
Protein domain
:
DNA repair protein Rad51, catalytic domain
(18)
Sulfolobus solfataricus [TaxId: 2287]
(2)
2a
d2zuba2
A:73-322
2b
d2zubb2
B:73-322
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CATH Domains
(2, 2)
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all CATH domains
1a: CATH_2zubA02 (A:73-322)
2a: CATH_2zubA01 (A:13-72)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Sulfolobus solfataricus. Organism_taxid: 2287.
(12)
1a
2zubA02
A:73-322
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
DNA polymerase; domain 1
(617)
Homologous Superfamily
:
5' to 3' exonuclease, C-terminal subdomain
(384)
Sulfolobus solfataricus. Organism_taxid: 2287.
(7)
2a
2zubA01
A:13-72
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Rad51_2zubB01 (B:65-322)
1b: PFAM_Rad51_2zubB02 (B:65-322)
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Clan
:
P-loop_NTPase
(1112)
Family
:
Rad51
(10)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(4)
1a
Rad51-2zubB01
B:65-322
1b
Rad51-2zubB02
B:65-322
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