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2ZJ7
Biol. Unit 1
Info
Asym.Unit (110 KB)
Biol.Unit 1 (103 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF D157A MUTANT OF PSEUDOMONAS SP. MIS38 LIPASE
Authors
:
C. Angkawidjaja, K. Kuwahara, S. Kanaya
Date
:
29 Feb 08 (Deposition) - 02 Dec 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.21
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Family I. 3 Lipase, Beta Roll, Calcium Binding Protein, Rtx Protein, Hydrolase, Calcium Site Mutants
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Kuwahara, C. Angkawidjaja, H. Matsumura, Y. Koga, K. Takano, S. Kanaya
Importance Of The Ca2+-Binding Sites In The N-Catalytic Domain Of A Family I. 3 Lipase For Activity And Stability
Protein Eng. Des. Sel. V. 21 737 2008
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:253 , ASP A:275 , ASP A:283 , ASN A:284 , HOH A:687 , HOH A:859
BINDING SITE FOR RESIDUE CA A 618
02
AC2
SOFTWARE
LYS A:278 , ALA A:281 , ASP A:283 , ASP A:337 , HOH A:680
BINDING SITE FOR RESIDUE CA A 619
03
AC3
SOFTWARE
SER A:374 , SER A:376 , ASP A:378 , GLY A:391 , ALA A:393 , ASP A:396
BINDING SITE FOR RESIDUE CA A 620
04
AC4
SOFTWARE
GLY A:383 , GLY A:385 , ASP A:387 , ASP A:400 , GLY A:402 , ASN A:405
BINDING SITE FOR RESIDUE CA A 621
05
AC5
SOFTWARE
ARG A:392 , GLY A:394 , ASP A:396 , GLY A:409 , ALA A:411 , ASN A:414
BINDING SITE FOR RESIDUE CA A 622
06
AC6
SOFTWARE
THR A:494 , GLY A:496 , ASP A:498 , GLY A:511 , ASP A:513 , ASP A:516
BINDING SITE FOR RESIDUE CA A 623
07
AC7
SOFTWARE
LEU A:512 , GLY A:514 , ASP A:516 , GLY A:529 , ALA A:531 , ASP A:534
BINDING SITE FOR RESIDUE CA A 624
08
AC8
SOFTWARE
GLY A:521 , GLY A:523 , ASP A:525 , SER A:538 , GLY A:540 , ASP A:543
BINDING SITE FOR RESIDUE CA A 625
09
AC9
SOFTWARE
GLY A:530 , GLY A:532 , ASP A:534 , PHE A:551 , ASP A:554 , HOH A:676
BINDING SITE FOR RESIDUE CA A 626
10
BC1
SOFTWARE
GLY A:541 , THR A:560 , ASN A:562 , ASP A:563 , HOH A:897
BINDING SITE FOR RESIDUE CA A 627
11
BC2
SOFTWARE
ASP A:128 , HIS A:132
BINDING SITE FOR RESIDUE ZN A 628
12
BC3
SOFTWARE
HIS A:517 , GLU A:537
BINDING SITE FOR RESIDUE ZN A 629
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_HemolysinCabind_2zj7A01 (A:528-545)
1b: PFAM_HemolysinCabind_2zj7A02 (A:528-545)
1c: PFAM_HemolysinCabind_2zj7A03 (A:528-545)
1d: PFAM_HemolysinCabind_2zj7A04 (A:528-545)
1e: PFAM_HemolysinCabind_2zj7A05 (A:528-545)
1f: PFAM_HemolysinCabind_2zj7A06 (A:528-545)
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Clans
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(
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(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: HemolysinCabind]
(16)
Family
:
HemolysinCabind
(16)
Pseudomonas sp. MIS38
(4)
1a
HemolysinCabind-2zj7A01
A:528-545
1b
HemolysinCabind-2zj7A02
A:528-545
1c
HemolysinCabind-2zj7A03
A:528-545
1d
HemolysinCabind-2zj7A04
A:528-545
1e
HemolysinCabind-2zj7A05
A:528-545
1f
HemolysinCabind-2zj7A06
A:528-545
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Chain A
Asymmetric Unit 1
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Asym.Unit (110 KB)
Header - Asym.Unit
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