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2ZJ4
Asym. Unit
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Asym.Unit (70 KB)
Biol.Unit 1 (127 KB)
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(1)
Title
:
ISOMERASE DOMAIN OF HUMAN GLUCOSE:FRUCTOSE-6-PHOSPHATE AMIDOTRANSFERASE
Authors
:
Y. Nakaishi, M. Bando, K. Kondo, H. Tsuge
Date
:
29 Feb 08 (Deposition) - 13 Jan 09 (Release) - 13 Jan 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Glucosamine-6-Phosphate Synthase, Aldose/Ketose Isomerase, Crystal Structure, Rossmann-Like Fold, Transferase, Alternative Splicing, Aminotransferase, Glutamine Amidotransferase, Phosphoprotein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Nakaishi, M. Bando, H. Shimizu, K. Watanabe, F. Goto, H. Tsuge, K. Kondo, M. Komatsu
Structural Analysis Of Human Glutamine:Fructose-6-Phosphate Amidotransferase, A Key Regulator In Type 2 Diabetes
Febs Lett. V. 583 163 2009
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHA... (AGPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
AGP
1
Ligand/Ion
2-DEOXY-2-AMINO GLUCITOL-6-PHOSPHATE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:374 , THR A:375 , SER A:376 , SER A:420 , GLN A:421 , SER A:422 , THR A:425 , VAL A:471 , ALA A:472 , SER A:473 , LYS A:557 , GLU A:560 , HIS A:576 , HOH A:685 , HOH A:692 , HOH A:696 , HOH A:700 , HOH A:702 , HOH A:728
BINDING SITE FOR RESIDUE AGP A 1
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SAPs(SNPs)/Variants
(7, 7)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_065345 (D347Y, chain A, )
2: VAR_065346 (R384H, chain A, )
3: VAR_065347 (R433H, chain A, )
4: VAR_065348 (M490T, chain A, )
5: VAR_065349 (M491T, chain A, )
6: VAR_065350 (R495W, chain A, )
7: VAR_065351 (R511W, chain A, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_065345
D
366
Y
GFPT1_HUMAN
Disease (CMS12)
---
A
D
347
Y
2
UniProt
VAR_065346
R
403
H
GFPT1_HUMAN
Disease (CMS12)
---
A
R
384
H
3
UniProt
VAR_065347
R
452
H
GFPT1_HUMAN
Disease (CMS12)
---
A
R
433
H
4
UniProt
VAR_065348
M
509
T
GFPT1_HUMAN
Disease (CMS12)
---
A
M
490
T
5
UniProt
VAR_065349
M
510
T
GFPT1_HUMAN
Disease (CMS12)
---
A
M
491
T
6
UniProt
VAR_065350
R
514
W
GFPT1_HUMAN
Disease (CMS12)
---
A
R
495
W
7
UniProt
VAR_065351
R
530
W
GFPT1_HUMAN
Disease (CMS12)
---
A
R
511
W
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: SIS (A:358-497|A:529-670)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SIS
PS51464
SIS domain profile.
GFPT1_HUMAN
377-516
548-689
2
A:358-497
A:529-670
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2zj4a_ (A:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
SIS domain
(85)
Superfamily
:
SIS domain
(85)
Family
:
automated matches
(22)
Protein domain
:
automated matches
(22)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d2zj4a_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_SIS_2zj4A01 (A:532-663)
1b: PFAM_SIS_2zj4A02 (A:532-663)
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Clan
:
SIS
(53)
Family
:
SIS
(23)
Homo sapiens (Human)
(3)
1a
SIS-2zj4A01
A:532-663
1b
SIS-2zj4A02
A:532-663
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Asymmetric Unit 1
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Asym.Unit (70 KB)
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