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2Z82
Asym. Unit
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Asym.Unit (99 KB)
Biol.Unit 1 (93 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE TLR1-TLR2 HETERODIMER INDUCED BY BINDING OF A TRI-ACYLATED LIPOPEPTIDE
Authors
:
J. O. Lee, M. S. Jin, S. E. Kim, J. Y. Heo
Date
:
30 Aug 07 (Deposition) - 02 Oct 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Tlr2, Pam2Csk4, Lipopeptide, Innate Immunity, Cytoplasmic Vesicle, Glycoprotein, Immune Response, Inflammatory Response, Leucine-Rich Repeat, Membrane, Receptor, Transmembrane, Immune System
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. S. Jin, S. E. Kim, J. Y. Heo, M. E. Lee, H. M. Kim, S. G. Paik, H. Lee, J. O. Lee
Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide
Cell(Cambridge, Mass. ) V. 130 1071 2007
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: ALPHA-D-MANNOSE (MANa)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3a: 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOP... (NDGa)
4a: (2R)-3-{[(2R)-2-AMINO-3-HYDROXYPRO... (PDJa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
MAN
1
Ligand/Ion
ALPHA-D-MANNOSE
2
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
NDG
1
Ligand/Ion
2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
4
PDJ
1
Ligand/Ion
(2R)-3-{[(2R)-2-AMINO-3-HYDROXYPROPYL]THIO}PROPANE-1,2-DIYL DIHEXADECANOATE
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO A:387 , ASN A:414 , NAG A:802
BINDING SITE FOR RESIDUE NAG A 801
2
AC2
SOFTWARE
ARG A:225 , NAG A:801
BINDING SITE FOR RESIDUE NAG A 802
3
AC3
SOFTWARE
SER A:421 , PHE A:440 , ASN A:442 , ASP A:463 , NAG A:812
BINDING SITE FOR RESIDUE NAG A 811
4
AC4
SOFTWARE
ARG A:486 , NAG A:811 , MAN A:813
BINDING SITE FOR RESIDUE NAG A 812
5
AC5
SOFTWARE
NAG A:812
BINDING SITE FOR RESIDUE MAN A 813
6
AC6
SOFTWARE
PRO A:146 , ASN A:147 , HOH A:836 , HOH A:900 , HOH A:906
BINDING SITE FOR RESIDUE NDG A 821
7
AC7
SOFTWARE
PHE A:266 , LEU A:270 , VAL A:282 , PHE A:284 , ILE A:319 , PHE A:322 , LEU A:335 , LYS A:347 , VAL A:348 , PHE A:349 , LEU A:350 , PHE A:355
BINDING SITE FOR RESIDUE PDJ A 1
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 10)
Info
All PROSITE Patterns/Profiles
1: LRR (A:53-74|A:77-98|A:101-122|A:125-14...)
2: TIR (A:553-574)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LRR
PS51450
Leucine-rich repeat profile.
TLR2_MOUSE
53-74
77-98
101-122
125-146
361-381
388-409
414-435
478-499
458-477
9
A:53-74
A:77-98
A:101-122
A:125-146
A:361-381
A:388-409
A:414-435
A:478-499
A:458-477
2
TIR
PS50104
TIR domain profile.
TLR2_MOUSE
639-784
1
A:553-574
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(3, 5)
Info
all PFAM domains
1a: PFAM_LRR_6_2z82A01 (A:412-427)
2a: PFAM_LRR_7_2z82A02 (A:457-474)
3a: PFAM_LRR_8_2z82A03 (A:477-506)
3b: PFAM_LRR_8_2z82A04 (A:477-506)
3c: PFAM_LRR_8_2z82A05 (A:477-506)
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Clans
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Families
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(
)
Organisms
(
)
(
)
Clan
:
LRR
(77)
Family
:
LRR_6
(24)
Mus musculus (Mouse)
(3)
1a
LRR_6-2z82A01
A:412-427
Family
:
LRR_7
(15)
Mus musculus (Mouse)
(2)
2a
LRR_7-2z82A02
A:457-474
Family
:
LRR_8
(41)
Mus musculus (Mouse)
(2)
3a
LRR_8-2z82A03
A:477-506
3b
LRR_8-2z82A04
A:477-506
3c
LRR_8-2z82A05
A:477-506
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Chain A
Asymmetric Unit 1
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Asym.Unit (99 KB)
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