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2Z7Q
Asym. Unit
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Asym.Unit (51 KB)
Biol.Unit 1 (47 KB)
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Title
:
CRYSTAL STRUCTURE OF THE N-TERMINAL KINASE DOMAIN OF HUMAN RSK-1 BOUND TO AMP-PCP
Authors
:
M. Ikuta, S. K. Munshi
Date
:
28 Aug 07 (Deposition) - 13 May 08 (Release) - 15 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Protein Kinase; Cancer; Kinase Inhibitor, Atp-Binding, Magnesium, Metal-Binding, Nucleotide-Binding, Phosphorylation, Serine/Threonine-Protein Kinase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Ikuta, M. Kornienko, N. Byrne, J. C. Reid, S. Mizuarai, H. Kotani, S. K. Munshi
Crystal Structures Of The N-Terminal Kinase Domain Of Human Rsk1 Bound To Three Different Ligands: Implications For The Design Of Rsk1 Specific Inhibitors.
Protein Sci. V. 16 2626 2007
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: PHOSPHOMETHYLPHOSPHONIC ACID ADENY... (ACPa)
2a: MAGNESIUM ION (MGa)
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No.
Name
Count
Type
Full Name
1
ACP
1
Ligand/Ion
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
2
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:192 , THR A:204 , ASP A:205 , ACP A:500
BINDING SITE FOR RESIDUE MG A 501
2
AC2
SOFTWARE
LEU A:68 , GLN A:70 , GLY A:71 , SER A:72 , ALA A:92 , ASP A:142 , LEU A:144 , LYS A:189 , ASN A:192 , LEU A:194 , ASP A:205 , MG A:501 , HOH A:538 , HOH A:541
BINDING SITE FOR RESIDUE ACP A 500
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021864 (K335T, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021864
K
335
T
KS6A1_HUMAN
Polymorphism
2229712
A
K
335
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:68-94|-)
2: PROTEIN_KINASE_ST (A:183-195|-)
3: AGC_KINASE_CTER (A:322-340)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
KS6A1_HUMAN
68-94
424-447
1
A:68-94
-
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
KS6A1_HUMAN
183-195
531-543
1
A:183-195
-
3
AGC_KINASE_CTER
PS51285
AGC-kinase C-terminal domain profile.
KS6A1_HUMAN
322-391
1
A:322-340
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2z7qa_ (A:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
automated matches
(529)
Protein domain
:
automated matches
(529)
Human (Homo sapiens) [TaxId: 9606]
(438)
1a
d2z7qa_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_2z7qA01 (A:56-147)
2a: CATH_2z7qA02 (A:148-340)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2z7qA01
A:56-147
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
2z7qA02
A:148-340
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Pkinase_2z7qA01 (A:62-321)
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Clans
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)
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)
(
)
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-2z7qA01
A:62-321
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Chain A
Asymmetric Unit 1
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Asym.Unit (51 KB)
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