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2Z5F
Asym. Unit
Info
Asym.Unit (110 KB)
Biol.Unit 1 (106 KB)
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(1)
Title
:
HUMAN SULFOTRANSFERASE SULT1B1 IN COMPLEX WITH PAP
Authors
:
L. Dombrovski, T. Pegasova, H. Wu, P. Loppnau, A. M. Edwards, C. H. Arrowsmith, M. Sundstrom, A. N. Plotnikov, A. Bochkarev, Structural Genomics Consortium (Sgc)
Date
:
07 Jul 07 (Deposition) - 14 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Sult, Sulfotransferase, Pap, Structural Genomics, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Dombrovski, A. Dong, A. Bochkarev, A. N. Plotnikov
Crystal Structures Of Human Sulfotransferases Sult1B1 And Sult1C1 Complexed With The Cofactor Product Adenosine-3'-5'-Diphosphate (Pap)
Proteins V. 64 1091 2006
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pa)
1b: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
A3P
2
Ligand/Ion
ADENOSINE-3'-5'-DIPHOSPHATE
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(7, 14)
Info
All Exons
Exon 1.5a (A:4-50 | B:4-50)
Exon 1.6 (A:50-93 | B:50-93)
Exon 1.7 (A:93-125 | B:93-125)
Exon 1.8b (A:126-168 | B:126-168)
Exon 1.9 (A:168-199 | B:168-199)
Exon 1.10 (A:200-260 | B:200-260)
Exon 1.11 (A:260-296 | B:260-296)
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All Exon Boundaries
1: Boundary 1.3a/1.5a
2: Boundary 1.5a/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/1.8b
5: Boundary 1.8b/1.9
6: Boundary 1.9/1.10
7: Boundary 1.10/1.11
8: Boundary 1.11/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3a
ENST00000310613
3a
ENSE00001180398
chr4:
70626430-70626177
254
ST1B1_HUMAN
-
0
0
-
-
1.5a
ENST00000310613
5a
ENSE00001180407
chr4:
70620979-70620788
192
ST1B1_HUMAN
1-50
50
2
A:4-50
B:4-50
47
47
1.6
ENST00000310613
6
ENSE00002155316
chr4:
70620516-70620388
129
ST1B1_HUMAN
50-93
44
2
A:50-93
B:50-93
44
44
1.7
ENST00000310613
7
ENSE00001180389
chr4:
70615536-70615439
98
ST1B1_HUMAN
93-125
33
2
A:93-125
B:93-125
33
33
1.8b
ENST00000310613
8b
ENSE00001180385
chr4:
70599982-70599856
127
ST1B1_HUMAN
126-168
43
2
A:126-168
B:126-168
43
43
1.9
ENST00000310613
9
ENSE00001180380
chr4:
70599225-70599131
95
ST1B1_HUMAN
168-199
32
2
A:168-199
B:168-199
32
32
1.10
ENST00000310613
10
ENSE00001180373
chr4:
70596399-70596219
181
ST1B1_HUMAN
200-260
61
2
A:200-260
B:200-260
61
61
1.11
ENST00000310613
11
ENSE00001239171
chr4:
70592918-70592566
353
ST1B1_HUMAN
260-296
37
2
A:260-296
B:260-296
37
37
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2z5fa_ (A:)
1b: SCOP_d2z5fb_ (B:)
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)
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)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
PAPS sulfotransferase
(54)
Protein domain
:
Thyroid hormone sulfotransferase Sult1b1
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2z5fa_
A:
1b
d2z5fb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2z5fA00 (A:4-296)
1b: CATH_2z5fB00 (B:4-296)
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)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2z5fA00
A:4-296
1b
2z5fB00
B:4-296
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Sulfotransfer_1_2z5fB01 (B:38-289)
1b: PFAM_Sulfotransfer_1_2z5fB02 (B:38-289)
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Clan
:
P-loop_NTPase
(1112)
Family
:
Sulfotransfer_1
(24)
Homo sapiens (Human)
(16)
1a
Sulfotransfer_1-2z5fB01
B:38-289
1b
Sulfotransfer_1-2z5fB02
B:38-289
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