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2YUN
Asym. Unit
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Asym.Unit (390 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SH3 DOMAIN OF HUMAN NOSTRIN
Authors
:
H. Abe, N. Tochio, K. Miyamoto, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
06 Apr 07 (Deposition) - 09 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Nitric Oxide Synthase Trafficker, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Protein Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Abe, K. Miyamoto, N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Sh3 Domain Of Human Nostrin
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_032569 (E40E, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_032569
G
473
E
NOSTN_HUMAN
Polymorphism
479661
A
E
40
E
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SH3 (A:6-64)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH3
PS50002
Src homology 3 (SH3) domain profile.
NOSTN_HUMAN
438-497
1
A:6-64
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Exons
(3, 3)
Info
All Exons
Exon 1.21b (A:1-5 (gaps))
Exon 1.22 (A:6-29)
Exon 1.23d (A:29-73)
View:
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All Exon Boundaries
1: Boundary 1.20c/1.21b
2: Boundary 1.21b/1.22
3: Boundary 1.22/1.23d
4: Boundary 1.23d/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.5b
ENST00000317647
5b
ENSE00001829457
chr2:
169658928-169659183
256
NOSTN_HUMAN
1-9
9
0
-
-
1.7a
ENST00000317647
7a
ENSE00001723304
chr2:
169668077-169668162
86
NOSTN_HUMAN
10-38
29
0
-
-
1.9
ENST00000317647
9
ENSE00001669046
chr2:
169681144-169681227
84
NOSTN_HUMAN
38-66
29
0
-
-
1.10
ENST00000317647
10
ENSE00001592289
chr2:
169684668-169684730
63
NOSTN_HUMAN
66-87
22
0
-
-
1.11
ENST00000317647
11
ENSE00001652061
chr2:
169684930-169685011
82
NOSTN_HUMAN
87-114
28
0
-
-
1.12b
ENST00000317647
12b
ENSE00001187459
chr2:
169687982-169688044
63
NOSTN_HUMAN
115-135
21
0
-
-
1.13a
ENST00000317647
13a
ENSE00001187453
chr2:
169690737-169690835
99
NOSTN_HUMAN
136-168
33
0
-
-
1.14b
ENST00000317647
14b
ENSE00001071330
chr2:
169699502-169699627
126
NOSTN_HUMAN
169-210
42
0
-
-
1.16
ENST00000317647
16
ENSE00002149442
chr2:
169707594-169707692
99
NOSTN_HUMAN
211-243
33
0
-
-
1.17
ENST00000317647
17
ENSE00001071351
chr2:
169707789-169707914
126
NOSTN_HUMAN
244-285
42
0
-
-
1.18a
ENST00000317647
18a
ENSE00001071328
chr2:
169711862-169711970
109
NOSTN_HUMAN
286-322
37
0
-
-
1.19c
ENST00000317647
19c
ENSE00001772533
chr2:
169713200-169713288
89
NOSTN_HUMAN
322-351
30
0
-
-
1.20c
ENST00000317647
20c
ENSE00001187435
chr2:
169716022-169716147
126
NOSTN_HUMAN
352-393
42
0
-
-
1.21b
ENST00000317647
21b
ENSE00001187432
chr2:
169717305-169717419
115
NOSTN_HUMAN
394-432
39
1
A:1-5 (gaps)
7
1.22
ENST00000317647
22
ENSE00001187426
chr2:
169718470-169718559
90
NOSTN_HUMAN
432-462
31
1
A:6-29
24
1.23d
ENST00000317647
23d
ENSE00001833413
chr2:
169721344-169722024
681
NOSTN_HUMAN
462-506
45
1
A:29-73
45
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2yuna_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
SH3-domain
(369)
Family
:
automated matches
(114)
Protein domain
:
automated matches
(114)
Human (Homo sapiens) [TaxId: 9606]
(74)
1a
d2yuna_
A:
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CATH Domains
(0, 0)
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_SH3_1_2yunA01 (A:11-56)
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Clan
:
SH3
(175)
Family
:
SH3_1
(141)
Homo sapiens (Human)
(69)
1a
SH3_1-2yunA01
A:11-56
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Chain A
Asymmetric Unit 1
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