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2YU4
Asym. Unit
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Asym.Unit (501 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SP-RING DOMAIN IN NON-SMC ELEMENT 2 HOMOLOG (MMS21, S. CEREVISIAE)
Authors
:
F. He, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Tarada, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
05 Apr 07 (Deposition) - 09 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Nmr, Sp-Ring Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Apoptosis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. He, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Tarada, S. Yokoyama
Solution Structure Of The Sp-Ring Domain In Non-Smc Element 2 Homolog (Mms21, S. Cerevisiae)
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ZINC ION (ZNa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:26 , HIS A:28 , CYS A:51 , CYS A:56
BINDING SITE FOR RESIDUE ZN A 201
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available in "Model" view)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZF_SP_RING (A:8-77)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZF_SP_RING
PS51044
Zinc finger SP-RING-type profile.
NSE2_HUMAN
154-236
1
A:8-77
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Exons
(3, 3)
Info
All Exons
Exon 1.11 (A:1-14 (gaps))
Exon 1.12b (A:15-50)
Exon 1.14d (A:50-88)
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All Exon Boundaries
1: Boundary 1.10a/1.11
2: Boundary 1.11/1.12b
3: Boundary 1.12b/1.14d
4: Boundary 1.14d/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1d
ENST00000287437
1d
ENSE00002116636
chr8:
126104095-126104200
106
NSE2_HUMAN
-
0
0
-
-
1.3b
ENST00000287437
3b
ENSE00001237234
chr8:
126114293-126114388
96
NSE2_HUMAN
-
0
0
-
-
1.4b
ENST00000287437
4b
ENSE00002155115
chr8:
126114559-126114729
171
NSE2_HUMAN
1-53
53
0
-
-
1.8a
ENST00000287437
8a
ENSE00001211148
chr8:
126163413-126163519
107
NSE2_HUMAN
53-88
36
0
-
-
1.10a
ENST00000287437
10a
ENSE00002154632
chr8:
126194345-126194498
154
NSE2_HUMAN
89-140
52
0
-
-
1.11
ENST00000287437
11
ENSE00001236866
chr8:
126369461-126369561
101
NSE2_HUMAN
140-173
34
1
A:1-14 (gaps)
24
1.12b
ENST00000287437
12b
ENSE00001173804
chr8:
126369954-126370060
107
NSE2_HUMAN
174-209
36
1
A:15-50
36
1.14d
ENST00000287437
14d
ENSE00002096207
chr8:
126379010-126379362
353
NSE2_HUMAN
209-247
39
1
A:50-88
39
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_zf_Nse_2yu4A01 (A:8-57)
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Clans
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Families
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Organisms
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)
(
)
Clan
:
RING
(39)
Family
:
zf-Nse
(1)
Homo sapiens (Human)
(1)
1a
zf-Nse-2yu4A01
A:8-57
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Chain A
Asymmetric Unit 1
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