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Asym. Unit
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Asym.Unit (201 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE FIRST WW DOMAIN FROM THE MOUSE TRANSCRIPTION ELONGATION REGULATOR 1, TRANSCRIPTION FACTOR CA150
Authors
:
S. Ohnishi, H. Li, S. Koshiba, T. Harada, S. Watanabe, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
03 Apr 07 (Deposition) - 09 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Transcription Elongation Regulator 1, Ca150, Fbp28, Ww Domain, Nmr, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Protein Binding
(Keyword Search:
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Reference
:
S. Ohnishi, H. Li, S. Koshiba, T. Harada, S. Watanabe, T. Kigawa, S. Yokoyama
Solution Structure Of The First Ww Domain From The Mouse Transcription Elongation Regulator 1, Transcription Factor Ca150
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: WW_DOMAIN_2 (A:8-39|-|-)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WW_DOMAIN_2
PS50020
WW/rsp5/WWP domain profile.
TCRG1_MOUSE
131-164
431-464
534-563
1
A:8-39
-
-
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Exons
(2, 2)
Info
All Exons
Exon 1.3 (A:1-21 (gaps))
Exon 1.4 (A:22-40)
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All Exon Boundaries
1: Boundary 1.2/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSMUST00000025375
1
ENSMUSE00000246334
chr18:
42671141-42671239
99
TCRG1_MOUSE
1-20
20
0
-
-
1.2
ENSMUST00000025375
2
ENSMUSE00000246318
chr18:
42679022-42679247
226
TCRG1_MOUSE
20-95
76
0
-
-
1.3
ENSMUST00000025375
3
ENSMUSE00000142916
chr18:
42682568-42682720
153
TCRG1_MOUSE
96-146
51
1
A:1-21 (gaps)
25
1.4
ENSMUST00000025375
4
ENSMUSE00000142910
chr18:
42683547-42684006
460
TCRG1_MOUSE
147-300
154
1
A:22-40
19
1.5
ENSMUST00000025375
5
ENSMUSE00000142917
chr18:
42690302-42690544
243
TCRG1_MOUSE
300-381
82
0
-
-
1.6
ENSMUST00000025375
6
ENSMUSE00000142908
chr18:
42694739-42694801
63
TCRG1_MOUSE
381-402
22
0
-
-
1.7
ENSMUST00000025375
7
ENSMUSE00000142915
chr18:
42695832-42696032
201
TCRG1_MOUSE
402-469
68
0
-
-
1.8
ENSMUST00000025375
8
ENSMUSE00000142909
chr18:
42696516-42696628
113
TCRG1_MOUSE
469-506
38
0
-
-
1.9
ENSMUST00000025375
9
ENSMUSE00000142918
chr18:
42697622-42697710
89
TCRG1_MOUSE
507-536
30
0
-
-
1.10
ENSMUST00000025375
10
ENSMUSE00000142907
chr18:
42708051-42708211
161
TCRG1_MOUSE
536-590
55
0
-
-
1.11
ENSMUST00000025375
11
ENSMUSE00000142912
chr18:
42709492-42709548
57
TCRG1_MOUSE
590-609
20
0
-
-
1.12
ENSMUST00000025375
12
ENSMUSE00000142914
chr18:
42709696-42709762
67
TCRG1_MOUSE
609-631
23
0
-
-
1.13
ENSMUST00000025375
13
ENSMUSE00000246134
chr18:
42712146-42712281
136
TCRG1_MOUSE
631-676
46
0
-
-
1.14
ENSMUST00000025375
14
ENSMUSE00000246118
chr18:
42713062-42713151
90
TCRG1_MOUSE
677-706
30
0
-
-
1.15
ENSMUST00000025375
15
ENSMUSE00000246090
chr18:
42720588-42720706
119
TCRG1_MOUSE
707-746
40
0
-
-
1.16
ENSMUST00000025375
16
ENSMUSE00000246066
chr18:
42723737-42723887
151
TCRG1_MOUSE
746-796
51
0
-
-
1.17
ENSMUST00000025375
17
ENSMUSE00000246042
chr18:
42727525-42727689
165
TCRG1_MOUSE
797-851
55
0
-
-
1.18
ENSMUST00000025375
18
ENSMUSE00000246017
chr18:
42728082-42728264
183
TCRG1_MOUSE
852-912
61
0
-
-
1.19
ENSMUST00000025375
19
ENSMUSE00000245983
chr18:
42730669-42730848
180
TCRG1_MOUSE
913-972
60
0
-
-
1.20
ENSMUST00000025375
20
ENSMUSE00000245943
chr18:
42731478-42731561
84
TCRG1_MOUSE
973-1000
28
0
-
-
1.21
ENSMUST00000025375
21
ENSMUSE00000458574
chr18:
42732914-42733014
101
TCRG1_MOUSE
1001-1034
34
0
-
-
1.22
ENSMUST00000025375
22
ENSMUSE00000480281
chr18:
42734172-42735439
1268
TCRG1_MOUSE
1034-1100
67
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2ysia_ (A:)
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Class
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All beta proteins
(24004)
Fold
:
WW domain-like
(101)
Superfamily
:
WW domain
(80)
Family
:
WW domain
(69)
Protein domain
:
automated matches
(10)
Mouse (Mus musculus) [TaxId: 10090]
(2)
1a
d2ysia_
A:
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_WW_2ysiA01 (A:8-37)
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Clan
:
no clan defined [family: WW]
(77)
Family
:
WW
(77)
Mus musculus (Mouse)
(10)
1a
WW-2ysiA01
A:8-37
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