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Asym. Unit
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Asym.Unit (193 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE WW DOMAIN FROM THE HUMAN AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 3, APBB3
Authors
:
S. Ohnishi, M. Yoneyama, S. Koshiba, T. Harada, S. Watanabe, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
03 Apr 07 (Deposition) - 08 Apr 08 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Fe65-Like Protein 2, Ww Domain, Nmr, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Ohnishi, M. Yoneyama, S. Koshiba, T. Harada, S. Watanabe, T. Kigawa, S. Yokoyama
Solution Structure Of The Ww Domain From The Human Amyloid Beta A4 Precursor Protein-Binding Family B Member 3, Apbb3
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sorry, no Info available
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: WW_DOMAIN_2 (A:8-39)
2: WW_DOMAIN_1 (A:13-37)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WW_DOMAIN_2
PS50020
WW/rsp5/WWP domain profile.
APBB3_HUMAN
29-61
1
A:8-39
2
WW_DOMAIN_1
PS01159
WW/rsp5/WWP domain signature.
APBB3_HUMAN
35-59
1
A:13-37
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Exons
(1, 1)
Info
All Exons
Exon 1.13q (A:1-39 (gaps))
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All Exon Boundaries
1: Boundary 1.13b/1.13q
2: Boundary 1.13q/1.13t
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.13b
ENST00000357560
13b
ENSE00001812697
chr5:
139944274-139943782
493
APBB3_HUMAN
1-17
17
0
-
-
1.13q
ENST00000357560
13q
ENSE00000765161
chr5:
139943500-139943337
164
APBB3_HUMAN
17-71
55
1
A:1-39 (gaps)
41
1.13t
ENST00000357560
13t
ENSE00000765158
chr5:
139943255-139943179
77
APBB3_HUMAN
72-97
26
0
-
-
1.14c
ENST00000357560
14c
ENSE00000765156
chr5:
139942308-139942248
61
APBB3_HUMAN
97-117
21
0
-
-
1.14h
ENST00000357560
14h
ENSE00000765154
chr5:
139942084-139941938
147
APBB3_HUMAN
118-166
49
0
-
-
1.15c
ENST00000357560
15c
ENSE00001162509
chr5:
139941812-139941685
128
APBB3_HUMAN
167-209
43
0
-
-
1.15n
ENST00000357560
15n
ENSE00001727736
chr5:
139941434-139941429
6
APBB3_HUMAN
209-211
3
0
-
-
1.15s
ENST00000357560
15s
ENSE00001162483
chr5:
139941286-139941172
115
APBB3_HUMAN
211-249
39
0
-
-
1.16
ENST00000357560
16
ENSE00000765148
chr5:
139941034-139940950
85
APBB3_HUMAN
250-278
29
0
-
-
1.17a
ENST00000357560
17a
ENSE00000765146
chr5:
139940686-139940603
84
APBB3_HUMAN
278-306
29
0
-
-
1.18c
ENST00000357560
18c
ENSE00001162463
chr5:
139940339-139940224
116
APBB3_HUMAN
306-344
39
0
-
-
1.19b
ENST00000357560
19b
ENSE00001771362
chr5:
139940089-139939898
192
APBB3_HUMAN
345-408
64
0
-
-
1.20c
ENST00000357560
20c
ENSE00001837726
chr5:
139938406-139937857
550
APBB3_HUMAN
409-486
78
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2ysca1 (A:8-33)
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Class
:
All beta proteins
(24004)
Fold
:
WW domain-like
(101)
Superfamily
:
WW domain
(80)
Family
:
WW domain
(69)
Protein domain
:
Amyloid beta A4 precursor protein-binding family B member 3, APBB3
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2ysca1
A:8-33
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_WW_2yscA01 (A:9-37)
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Clan
:
no clan defined [family: WW]
(77)
Family
:
WW
(77)
Homo sapiens (Human)
(62)
1a
WW-2yscA01
A:9-37
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