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2YS4
Asym. Unit
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Asym.Unit (632 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE N-TERMINAL PAPD-LIKE DOMAIN OF HYDIN PROTEIN FROM HUMAN
Authors
:
H. Li, T. Tomizawa, S. Koshiba, S. Watanabe, T. Harada, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
03 Apr 07 (Deposition) - 08 Apr 08 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Hydin, Papd-Like, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Li, T. Tomizawa, S. Koshiba, S. Watanabe, T. Harada, T. Kigawa, S. Yokoyama
Solution Structure Of The N-Terminal Papd-Like Domain Of Hydin Protein From Human
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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PROSITE Patterns/Profiles
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Exons
(4, 4)
Info
All Exons
Exon 1.5 (A:1-7)
Exon 1.6 (A:8-65)
Exon 1.7 (A:65-107)
Exon 1.8 (A:107-122)
View:
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All Exon Boundaries
1: Boundary 1.4/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/1.8
5: Boundary 1.8/1.9
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000393567
1a
ENSE00001424414
chr16:
71264569-71264465
105
HYDIN_HUMAN
-
0
0
-
-
1.2a
ENST00000393567
2a
ENSE00002182352
chr16:
71220821-71220664
158
HYDIN_HUMAN
1-45
45
0
-
-
1.3
ENST00000393567
3
ENSE00001651606
chr16:
71218893-71218768
126
HYDIN_HUMAN
46-87
42
0
-
-
1.4
ENST00000393567
4
ENSE00001660436
chr16:
71212950-71212831
120
HYDIN_HUMAN
88-127
40
0
-
-
1.5
ENST00000393567
5
ENSE00001638010
chr16:
71209644-71209510
135
HYDIN_HUMAN
128-172
45
1
A:1-7
7
1.6
ENST00000393567
6
ENSE00001801312
chr16:
71196633-71196434
200
HYDIN_HUMAN
173-239
67
1
A:8-65
58
1.7
ENST00000393567
7
ENSE00001631444
chr16:
71186686-71186562
125
HYDIN_HUMAN
239-281
43
1
A:65-107
43
1.8
ENST00000393567
8
ENSE00001732065
chr16:
71171255-71171054
202
HYDIN_HUMAN
281-348
68
1
A:107-122
16
1.9
ENST00000393567
9
ENSE00001728099
chr16:
71163726-71163543
184
HYDIN_HUMAN
348-409
62
0
-
-
1.10
ENST00000393567
10
ENSE00001734156
chr16:
71149698-71149599
100
HYDIN_HUMAN
410-443
34
0
-
-
1.11
ENST00000393567
11
ENSE00001675420
chr16:
71127838-71127720
119
HYDIN_HUMAN
443-482
40
0
-
-
1.12
ENST00000393567
12
ENSE00001772928
chr16:
71122427-71122204
224
HYDIN_HUMAN
483-557
75
0
-
-
1.13
ENST00000393567
13
ENSE00001802008
chr16:
71113855-71113788
68
HYDIN_HUMAN
557-580
24
0
-
-
1.15
ENST00000393567
15
ENSE00001712559
chr16:
71103405-71103170
236
HYDIN_HUMAN
580-658
79
0
-
-
1.16a
ENST00000393567
16a
ENSE00001593787
chr16:
71101293-71101193
101
HYDIN_HUMAN
659-692
34
0
-
-
1.18
ENST00000393567
18
ENSE00001716764
chr16:
71098743-71098608
136
HYDIN_HUMAN
692-737
46
0
-
-
1.19
ENST00000393567
19
ENSE00001802215
chr16:
71096236-71096072
165
HYDIN_HUMAN
738-792
55
0
-
-
1.20
ENST00000393567
20
ENSE00001648371
chr16:
71094559-71094407
153
HYDIN_HUMAN
793-843
51
0
-
-
1.21
ENST00000393567
21
ENSE00001611924
chr16:
71065820-71065582
239
HYDIN_HUMAN
844-923
80
0
-
-
1.22a
ENST00000393567
22a
ENSE00001627183
chr16:
71061778-71061505
274
HYDIN_HUMAN
923-1014
92
0
-
-
1.23
ENST00000393567
23
ENSE00001725055
chr16:
71059429-71059286
144
HYDIN_HUMAN
1015-1062
48
0
-
-
1.24
ENST00000393567
24
ENSE00001628409
chr16:
71054220-71054077
144
HYDIN_HUMAN
1063-1110
48
0
-
-
1.25
ENST00000393567
25
ENSE00001726216
chr16:
71052345-71052032
314
HYDIN_HUMAN
1111-1215
105
0
-
-
1.26
ENST00000393567
26
ENSE00001801574
chr16:
71026113-71025973
141
HYDIN_HUMAN
1215-1262
48
0
-
-
1.28
ENST00000393567
28
ENSE00001718838
chr16:
71025299-71025196
104
HYDIN_HUMAN
1262-1297
36
0
-
-
1.29
ENST00000393567
29
ENSE00001798169
chr16:
71022387-71022296
92
HYDIN_HUMAN
1297-1327
31
0
-
-
1.30
ENST00000393567
30
ENSE00001728486
chr16:
71022036-71021827
210
HYDIN_HUMAN
1328-1397
70
0
-
-
1.31
ENST00000393567
31
ENSE00001651369
chr16:
71019225-71019088
138
HYDIN_HUMAN
1398-1443
46
0
-
-
1.32
ENST00000393567
32
ENSE00001778279
chr16:
71015471-71015294
178
HYDIN_HUMAN
1444-1503
60
0
-
-
1.33
ENST00000393567
33
ENSE00001776704
chr16:
71012944-71012817
128
HYDIN_HUMAN
1503-1545
43
0
-
-
1.34
ENST00000393567
34
ENSE00001658163
chr16:
71009172-71009039
134
HYDIN_HUMAN
1546-1590
45
0
-
-
1.35
ENST00000393567
35
ENSE00001761790
chr16:
71008573-71008437
137
HYDIN_HUMAN
1590-1636
47
0
-
-
1.36
ENST00000393567
36
ENSE00001602071
chr16:
71008203-71008076
128
HYDIN_HUMAN
1636-1678
43
0
-
-
1.37
ENST00000393567
37
ENSE00001802516
chr16:
71007923-71007732
192
HYDIN_HUMAN
1679-1742
64
0
-
-
1.38
ENST00000393567
38
ENSE00001798133
chr16:
71007395-71007246
150
HYDIN_HUMAN
1743-1792
50
0
-
-
1.39
ENST00000393567
39
ENSE00001650132
chr16:
71004662-71004423
240
HYDIN_HUMAN
1793-1872
80
0
-
-
1.40
ENST00000393567
40
ENSE00001752615
chr16:
70998799-70998631
169
HYDIN_HUMAN
1873-1929
57
0
-
-
1.41
ENST00000393567
41
ENSE00001664276
chr16:
70996041-70995862
180
HYDIN_HUMAN
1929-1989
61
0
-
-
1.42
ENST00000393567
42
ENSE00001754440
chr16:
70993723-70993550
174
HYDIN_HUMAN
1989-2047
59
0
-
-
1.43
ENST00000393567
43
ENSE00001596174
chr16:
70989451-70989278
174
HYDIN_HUMAN
2047-2105
59
0
-
-
1.44
ENST00000393567
44
ENSE00001677810
chr16:
70986538-70986324
215
HYDIN_HUMAN
2105-2176
72
0
-
-
1.45
ENST00000393567
45
ENSE00001612712
chr16:
70977852-70977715
138
HYDIN_HUMAN
2177-2222
46
0
-
-
1.46
ENST00000393567
46
ENSE00001708730
chr16:
70975722-70975539
184
HYDIN_HUMAN
2223-2284
62
0
-
-
1.47
ENST00000393567
47
ENSE00001731801
chr16:
70972658-70972517
142
HYDIN_HUMAN
2284-2331
48
0
-
-
1.48
ENST00000393567
48
ENSE00001713971
chr16:
70970017-70969855
163
HYDIN_HUMAN
2331-2385
55
0
-
-
1.50
ENST00000393567
50
ENSE00001647778
chr16:
70955120-70954494
627
HYDIN_HUMAN
2386-2594
209
0
-
-
1.51
ENST00000393567
51
ENSE00001666169
chr16:
70952332-70952114
219
HYDIN_HUMAN
2595-2667
73
0
-
-
1.52
ENST00000393567
52
ENSE00001671417
chr16:
70942764-70942556
209
HYDIN_HUMAN
2668-2737
70
0
-
-
1.53
ENST00000393567
53
ENSE00001631729
chr16:
70942337-70942155
183
HYDIN_HUMAN
2737-2798
62
0
-
-
1.54
ENST00000393567
54
ENSE00001700685
chr16:
70941394-70941275
120
HYDIN_HUMAN
2798-2838
41
0
-
-
1.55
ENST00000393567
55
ENSE00001626424
chr16:
70937967-70937808
160
HYDIN_HUMAN
2838-2891
54
0
-
-
1.56
ENST00000393567
56
ENSE00001618694
chr16:
70937700-70937528
173
HYDIN_HUMAN
2892-2949
58
0
-
-
1.57
ENST00000393567
57
ENSE00001717295
chr16:
70935105-70934907
199
HYDIN_HUMAN
2949-3015
67
0
-
-
1.58
ENST00000393567
58
ENSE00001679064
chr16:
70929983-70929884
100
HYDIN_HUMAN
3016-3049
34
0
-
-
1.59
ENST00000393567
59
ENSE00001601749
chr16:
70928451-70928352
100
HYDIN_HUMAN
3049-3082
34
0
-
-
1.60
ENST00000393567
60
ENSE00001759763
chr16:
70926432-70926264
169
HYDIN_HUMAN
3082-3138
57
0
-
-
1.61
ENST00000393567
61
ENSE00001710477
chr16:
70925787-70925549
239
HYDIN_HUMAN
3139-3218
80
0
-
-
1.62
ENST00000393567
62
ENSE00001693090
chr16:
70923607-70923490
118
HYDIN_HUMAN
3218-3257
40
0
-
-
1.63
ENST00000393567
63
ENSE00001662106
chr16:
70918027-70917823
205
HYDIN_HUMAN
3258-3326
69
0
-
-
1.64
ENST00000393567
64
ENSE00001723887
chr16:
70916798-70916563
236
HYDIN_HUMAN
3326-3404
79
0
-
-
1.65
ENST00000393567
65
ENSE00001714394
chr16:
70913659-70913508
152
HYDIN_HUMAN
3405-3455
51
0
-
-
1.66
ENST00000393567
66
ENSE00001608400
chr16:
70913389-70913200
190
HYDIN_HUMAN
3455-3518
64
0
-
-
1.67
ENST00000393567
67
ENSE00001597666
chr16:
70908822-70908720
103
HYDIN_HUMAN
3519-3553
35
0
-
-
1.68
ENST00000393567
68
ENSE00001634608
chr16:
70908495-70908208
288
HYDIN_HUMAN
3553-3649
97
0
-
-
1.69
ENST00000393567
69
ENSE00001629130
chr16:
70906082-70905940
143
HYDIN_HUMAN
3649-3696
48
0
-
-
1.70
ENST00000393567
70
ENSE00001645065
chr16:
70902691-70902473
219
HYDIN_HUMAN
3697-3769
73
0
-
-
1.71
ENST00000393567
71
ENSE00001684009
chr16:
70900232-70900072
161
HYDIN_HUMAN
3770-3823
54
0
-
-
1.72
ENST00000393567
72
ENSE00001780376
chr16:
70897085-70896988
98
HYDIN_HUMAN
3823-3856
34
0
-
-
1.73
ENST00000393567
73
ENSE00001697576
chr16:
70896158-70895951
208
HYDIN_HUMAN
3856-3925
70
0
-
-
1.74
ENST00000393567
74
ENSE00001762282
chr16:
70894804-70894592
213
HYDIN_HUMAN
3925-3996
72
0
-
-
1.75
ENST00000393567
75
ENSE00001639910
chr16:
70894109-70893971
139
HYDIN_HUMAN
3996-4042
47
0
-
-
1.76
ENST00000393567
76
ENSE00001604884
chr16:
70891773-70891608
166
HYDIN_HUMAN
4043-4098
56
0
-
-
1.77
ENST00000393567
77
ENSE00001637593
chr16:
70889178-70889031
148
HYDIN_HUMAN
4098-4147
50
0
-
-
1.78
ENST00000393567
78
ENSE00001767953
chr16:
70884558-70884351
208
HYDIN_HUMAN
4147-4216
70
0
-
-
1.79
ENST00000393567
79
ENSE00001772664
chr16:
70883850-70883629
222
HYDIN_HUMAN
4217-4290
74
0
-
-
1.80
ENST00000393567
80
ENSE00001734034
chr16:
70874136-70873967
170
HYDIN_HUMAN
4291-4347
57
0
-
-
1.81
ENST00000393567
81
ENSE00001723532
chr16:
70871791-70871593
199
HYDIN_HUMAN
4347-4413
67
0
-
-
1.82
ENST00000393567
82
ENSE00001647566
chr16:
70869737-70869579
159
HYDIN_HUMAN
4414-4466
53
0
-
-
1.83
ENST00000393567
83
ENSE00001708586
chr16:
70868067-70867790
278
HYDIN_HUMAN
4467-4559
93
0
-
-
1.84
ENST00000393567
84
ENSE00001593919
chr16:
70866970-70866751
220
HYDIN_HUMAN
4559-4632
74
0
-
-
1.85
ENST00000393567
85
ENSE00001664237
chr16:
70863733-70863521
213
HYDIN_HUMAN
4633-4703
71
0
-
-
1.86
ENST00000393567
86
ENSE00001637123
chr16:
70862332-70862169
164
HYDIN_HUMAN
4704-4758
55
0
-
-
1.87
ENST00000393567
87
ENSE00001695705
chr16:
70861314-70861164
151
HYDIN_HUMAN
4758-4808
51
0
-
-
1.88
ENST00000393567
88
ENSE00001768927
chr16:
70852475-70852245
231
HYDIN_HUMAN
4809-4885
77
0
-
-
1.90
ENST00000393567
90
ENSE00001032206
chr16:
70843910-70843686
225
HYDIN_HUMAN
4886-4960
75
0
-
-
1.91
ENST00000393567
91
ENSE00001313157
chr16:
70841965-70841292
674
HYDIN_HUMAN
4961-5120
160
0
-
-
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