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2YQF
Asym. Unit
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Asym.Unit (572 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE DEATH DOMAIN OF ANKYRIN-1
Authors
:
W. Tanabe, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
30 Mar 07 (Deposition) - 01 Apr 08 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Death Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. Tanabe, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of The Death Domain Of Ankyrin-1
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_000600 (S1392T, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_000600
S
1392
T
ANK1_HUMAN
Polymorphism
---
A
S
1392
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: DEATH_DOMAIN (A:1403-1487)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DEATH_DOMAIN
PS50017
Death domain profile.
ANK1_HUMAN
1403-1487
1
A:1403-1487
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Exons
(4, 4)
Info
All Exons
Exon 1.38 (A:1387-1395 (gaps))
Exon 1.39 (A:1395-1420)
Exon 1.40 (A:1420-1464)
Exon 1.41 (A:1464-1497)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.37a/1.38
2: Boundary 1.38/1.39
3: Boundary 1.39/1.40
4: Boundary 1.40/1.41
5: Boundary 1.41/1.43b
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000347528
2a
ENSE00001381881
chr8:
41655140-41655030
111
ANK1_HUMAN
1-9
9
0
-
-
1.4
ENST00000347528
4
ENSE00001252297
chr8:
41615655-41615554
102
ANK1_HUMAN
10-43
34
0
-
-
1.5
ENST00000347528
5
ENSE00001252286
chr8:
41591587-41591489
99
ANK1_HUMAN
44-76
33
0
-
-
1.6
ENST00000347528
6
ENSE00001252279
chr8:
41585524-41585426
99
ANK1_HUMAN
77-109
33
0
-
-
1.7
ENST00000347528
7
ENSE00001252268
chr8:
41584866-41584768
99
ANK1_HUMAN
110-142
33
0
-
-
1.8
ENST00000347528
8
ENSE00001252255
chr8:
41583464-41583279
186
ANK1_HUMAN
143-204
62
0
-
-
1.9
ENST00000347528
9
ENSE00001252247
chr8:
41582072-41581974
99
ANK1_HUMAN
205-237
33
0
-
-
1.10
ENST00000347528
10
ENSE00001252241
chr8:
41581151-41581053
99
ANK1_HUMAN
238-270
33
0
-
-
1.11
ENST00000347528
11
ENSE00001252233
chr8:
41580741-41580643
99
ANK1_HUMAN
271-303
33
0
-
-
1.12
ENST00000347528
12
ENSE00001252224
chr8:
41577376-41577179
198
ANK1_HUMAN
304-369
66
0
-
-
1.13
ENST00000347528
13
ENSE00001252214
chr8:
41575722-41575624
99
ANK1_HUMAN
370-402
33
0
-
-
1.14
ENST00000347528
14
ENSE00001252205
chr8:
41575220-41575122
99
ANK1_HUMAN
403-435
33
0
-
-
1.15
ENST00000347528
15
ENSE00001252199
chr8:
41574569-41574471
99
ANK1_HUMAN
436-468
33
0
-
-
1.16
ENST00000347528
16
ENSE00000692080
chr8:
41573367-41573170
198
ANK1_HUMAN
469-534
66
0
-
-
1.17
ENST00000347528
17
ENSE00001252194
chr8:
41572592-41572494
99
ANK1_HUMAN
535-567
33
0
-
-
1.18
ENST00000347528
18
ENSE00001252187
chr8:
41571772-41571674
99
ANK1_HUMAN
568-600
33
0
-
-
1.19
ENST00000347528
19
ENSE00000532984
chr8:
41566493-41566296
198
ANK1_HUMAN
601-666
66
0
-
-
1.20a
ENST00000347528
20a
ENSE00000692050
chr8:
41563759-41563661
99
ANK1_HUMAN
667-699
33
0
-
-
1.21
ENST00000347528
21
ENSE00000692046
chr8:
41561990-41561892
99
ANK1_HUMAN
700-732
33
0
-
-
1.22
ENST00000347528
22
ENSE00000532987
chr8:
41561657-41561559
99
ANK1_HUMAN
733-765
33
0
-
-
1.23
ENST00000347528
23
ENSE00001252162
chr8:
41559662-41559570
93
ANK1_HUMAN
766-796
31
0
-
-
1.24
ENST00000347528
24
ENSE00001252155
chr8:
41559140-41559068
73
ANK1_HUMAN
797-821
25
0
-
-
1.26
ENST00000347528
26
ENSE00001252145
chr8:
41557066-41556970
97
ANK1_HUMAN
821-853
33
0
-
-
1.27
ENST00000347528
27
ENSE00001252137
chr8:
41555639-41555561
79
ANK1_HUMAN
853-879
27
0
-
-
1.29
ENST00000347528
29
ENSE00001252128
chr8:
41554291-41554194
98
ANK1_HUMAN
880-912
33
0
-
-
1.30
ENST00000347528
30
ENSE00001191945
chr8:
41554105-41553881
225
ANK1_HUMAN
912-987
76
0
-
-
1.31
ENST00000347528
31
ENSE00001252111
chr8:
41552849-41552695
155
ANK1_HUMAN
987-1039
53
0
-
-
1.32a
ENST00000347528
32a
ENSE00001252103
chr8:
41552321-41552110
212
ANK1_HUMAN
1039-1109
71
0
-
-
1.33
ENST00000347528
33
ENSE00000532996
chr8:
41551620-41551416
205
ANK1_HUMAN
1110-1178
69
0
-
-
1.34
ENST00000347528
34
ENSE00000692020
chr8:
41550719-41550623
97
ANK1_HUMAN
1178-1210
33
0
-
-
1.35a
ENST00000347528
35a
ENSE00000532998
chr8:
41550394-41550166
229
ANK1_HUMAN
1210-1286
77
0
-
-
1.36
ENST00000347528
36
ENSE00001252076
chr8:
41548117-41547992
126
ANK1_HUMAN
1287-1328
42
0
-
-
1.37a
ENST00000347528
37a
ENSE00001252070
chr8:
41547864-41547745
120
ANK1_HUMAN
1329-1368
40
0
-
-
1.38
ENST00000347528
38
ENSE00000692006
chr8:
41546107-41546029
79
ANK1_HUMAN
1369-1395
27
1
A:1387-1395 (gaps)
27
1.39
ENST00000347528
39
ENSE00000533002
chr8:
41545748-41545674
75
ANK1_HUMAN
1395-1420
26
1
A:1395-1420
26
1.40
ENST00000347528
40
ENSE00000691993
chr8:
41543801-41543670
132
ANK1_HUMAN
1420-1464
45
1
A:1420-1464
45
1.41
ENST00000347528
41
ENSE00000691972
chr8:
41542208-41542062
147
ANK1_HUMAN
1464-1513
50
1
A:1464-1497
34
1.43b
ENST00000347528
43b
ENSE00000691945
chr8:
41530430-41529872
559
ANK1_HUMAN
1513-1699
187
0
-
-
1.44b
ENST00000347528
44b
ENSE00000691941
chr8:
41526082-41525785
298
ANK1_HUMAN
1699-1798
100
0
-
-
1.47
ENST00000347528
47
ENSE00001252325
chr8:
41521260-41521177
84
ANK1_HUMAN
1799-1826
28
0
-
-
1.48c
ENST00000347528
48c
ENSE00001361299
chr8:
41519459-41519319
141
ANK1_HUMAN
1827-1873
47
0
-
-
1.49e
ENST00000347528
49e
ENSE00001851591
chr8:
41513272-41510739
2534
ANK1_HUMAN
1874-1881
8
0
-
-
[
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Death_2yqfA01 (A:1404-1487)
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Clans
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Organisms
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(
)
Clan
:
Death
(18)
Family
:
Death
(11)
Homo sapiens (Human)
(7)
1a
Death-2yqfA01
A:1404-1487
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