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2YJF
Biol. Unit 1
Info
Asym.Unit (591 KB)
Biol.Unit 1 (379 KB)
Biol.Unit 2 (115 KB)
Biol.Unit 3 (93 KB)
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(1)
Title
:
OLIGOMERIC ASSEMBLY OF ACTIN BOUND TO MRTF-A
Authors
:
S. Mouilleron, C. A. Langer, S. Guettler, N. Q. Mcdonald, R. Treisman
Date
:
19 May 11 (Deposition) - 06 Jul 11 (Release) - 03 Oct 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.50
Chains
:
Asym. Unit : A,B,C,D,E,M
Biol. Unit 1: A,B,C,M (1x)
Biol. Unit 2: D (1x)
Biol. Unit 3: E (1x)
Keywords
:
Motor Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Mouilleron, C. A. Langer, S. Guettler, N. Q. Mcdonald, R. Treisman
Structure Of A Pentavalent G-Actin*Mrtf-A Complex Reveals How G-Actin Controls Nucleocytoplasmic Shuttling Of A Transcriptional Coactivator.
Sci. Signal. V. 4 Ra40 2011
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
1c: ADENOSINE-5'-TRIPHOSPHATE (ATPc)
1d: ADENOSINE-5'-TRIPHOSPHATE (ATPd)
1e: ADENOSINE-5'-TRIPHOSPHATE (ATPe)
2a: LATRUNCULIN B (LABa)
2b: LATRUNCULIN B (LABb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ATP
3
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
LAB
2
Ligand/Ion
LATRUNCULIN B
3
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:15 , LEU A:16 , PRO A:32 , GLN A:59 , ASP A:157 , ARG A:183 , THR A:186 , ARG A:206 , GLU A:207 , ARG A:210 , ATP A:1377
BINDING SITE FOR RESIDUE LAB A1376
2
AC2
SOFTWARE
GLY A:13 , SER A:14 , GLY A:15 , LEU A:16 , LYS A:18 , GLN A:137 , GLY A:156 , ASP A:157 , LYS A:213 , GLU A:214 , GLY A:301 , GLY A:302 , THR A:303 , MET A:305 , TYR A:306 , LYS A:336 , LAB A:1376 , MG A:1378
BINDING SITE FOR RESIDUE ATP A1377
3
AC3
SOFTWARE
ASP A:11 , GLN A:137 , ATP A:1377
BINDING SITE FOR RESIDUE MG A1378
4
AC4
SOFTWARE
GLY B:13 , SER B:14 , GLY B:15 , LEU B:16 , LYS B:18 , GLN B:137 , GLY B:156 , ASP B:157 , LYS B:213 , GLU B:214 , GLY B:301 , GLY B:302 , THR B:303 , MET B:305 , TYR B:306 , MG B:1378
BINDING SITE FOR RESIDUE ATP B1377
5
AC5
SOFTWARE
ASP B:11 , GLN B:137 , ATP B:1377
BINDING SITE FOR RESIDUE MG B1378
6
AC6
SOFTWARE
GLY C:15 , LEU C:16 , PRO C:32 , ASP C:157 , ARG C:183 , THR C:186 , ARG C:206 , GLU C:207 , ARG C:210 , ATP C:1377
BINDING SITE FOR RESIDUE LAB C1376
7
AC7
SOFTWARE
GLY C:13 , SER C:14 , GLY C:15 , LEU C:16 , LYS C:18 , GLN C:137 , GLY C:156 , ASP C:157 , LYS C:213 , GLU C:214 , GLY C:301 , GLY C:302 , THR C:303 , MET C:305 , TYR C:306 , LYS C:336 , LAB C:1376 , MG C:1378
BINDING SITE FOR RESIDUE ATP C1377
8
AC8
SOFTWARE
GLN C:137 , ATP C:1377
BINDING SITE FOR RESIDUE MG C1378
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(4, 11)
Info
All PROSITE Patterns/Profiles
1: RPEL ()
2: ACTINS_1 (A:53-62,C:54-61)
3: ACTINS_ACT_LIKE (A:104-116,B:104-116,C:104-116)
4: ACTINS_2 (A:356-364,B:356-364,C:356-364)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RPEL
PS51073
RPEL repeat profile.
MKL1_MOUSE
15-40
59-84
103-128
3
M:73-97
M:116-141
M:160-183
2
ACTINS_1
PS00406
Actins signature 1.
ACTS_RABIT
55-65
2
A:53-62
C:54-61
-
3
ACTINS_ACT_LIKE
PS01132
Actins and actin-related proteins signature.
ACTS_RABIT
106-118
3
A:104-116
B:104-116
C:104-116
-
-
4
ACTINS_2
PS00432
Actins signature 2.
ACTS_RABIT
358-366
3
A:356-364
B:356-364
C:356-364
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_Actin_2yjfE01 (E:6-371)
1b: PFAM_Actin_2yjfE02 (E:6-371)
1c: PFAM_Actin_2yjfE03 (E:6-371)
1d: PFAM_Actin_2yjfE04 (E:6-371)
1e: PFAM_Actin_2yjfE05 (E:6-371)
2a: PFAM_RPEL_2yjfM01 (M:160-183)
2b: PFAM_RPEL_2yjfM02 (M:160-183)
2c: PFAM_RPEL_2yjfM03 (M:160-183)
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Clans
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(
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(
)
Organisms
(
)
(
)
Clan
:
Actin_ATPase
(173)
Family
:
Actin
(70)
Oryctolagus cuniculus (Rabbit)
(47)
1a
Actin-2yjfE01
E:6-371
1b
Actin-2yjfE02
E:6-371
1c
Actin-2yjfE03
E:6-371
1d
Actin-2yjfE04
E:6-371
1e
Actin-2yjfE05
E:6-371
Clan
:
no clan defined [family: RPEL]
(4)
Family
:
RPEL
(4)
Mus musculus (Mouse)
(4)
2a
RPEL-2yjfM01
M:160-183
2b
RPEL-2yjfM02
M:160-183
2c
RPEL-2yjfM03
M:160-183
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (591 KB)
Header - Asym.Unit
Biol.Unit 1 (379 KB)
Header - Biol.Unit 1
Biol.Unit 2 (115 KB)
Header - Biol.Unit 2
Biol.Unit 3 (93 KB)
Header - Biol.Unit 3
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