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2YHE
Biol. Unit 3
Info
Asym.Unit (634 KB)
Biol.Unit 1 (217 KB)
Biol.Unit 2 (214 KB)
Biol.Unit 3 (213 KB)
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(1)
Title
:
STRUCTURE DETERMINATION OF THE STEREOSELECTIVE INVERTING SEC-ALKYLSULFATASE PISA1 FROM PSEUDOMONAS SP.
Authors
:
B. Kepplinger, K. Faber, P. Macheroux, M. Schober, T. Knaus, U. G. Wagne
Date
:
29 Apr 11 (Deposition) - 16 May 12 (Release) - 05 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,F (1x)
Biol. Unit 3: C,E (1x)
Keywords
:
Hydrolase, Inversion, Metallo-Beta-Lactamase Fold
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Knaus, M. Schober, B. Kepplinger, M. Faccinelli, J. Pitzer, K. Faber, P. Macheroux, U. Wagner
Structure And Mechanism Of An Inverting Alkylsulfatase From Pseudomonas Sp. Dsm6611 Specific For Secondary Alkylsulfates.
Febs J. V. 279 4374 2012
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
2g: ZINC ION (ZNg)
2h: ZINC ION (ZNh)
2i: ZINC ION (ZNi)
2j: ZINC ION (ZNj)
2k: ZINC ION (ZNk)
2l: ZINC ION (ZNl)
View:
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No.
Name
Count
Type
Full Name
1
SO4
2
Ligand/Ion
SULFATE ION
2
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(6, 6)
Info
All Sites
1: AC7 (SOFTWARE)
2: AC8 (SOFTWARE)
3: AC9 (SOFTWARE)
4: BC4 (SOFTWARE)
5: BC5 (SOFTWARE)
6: BC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC7
SOFTWARE
ASP C:183 , HIS C:184 , ASP C:310 , HIS C:355 , ZN C:701 , HOH C:2032
BINDING SITE FOR RESIDUE ZN C 700
2
AC8
SOFTWARE
HIS C:179 , HIS C:181 , GLU C:291 , ASP C:310 , ZN C:700 , HOH C:2032
BINDING SITE FOR RESIDUE ZN C 701
3
AC9
SOFTWARE
HIS C:181 , GLN C:232 , HIS C:317 , ASN C:318 , THR C:321 , ARG C:323 , ARG C:328 , TYR C:417 , HOH C:2032
BINDING SITE FOR RESIDUE SO4 C 801
4
BC4
SOFTWARE
ASP E:183 , HIS E:184 , ASP E:310 , HIS E:355 , ZN E:701 , HOH E:2050
BINDING SITE FOR RESIDUE ZN E 700
5
BC5
SOFTWARE
HIS E:179 , HIS E:181 , GLU E:291 , ASP E:310 , ZN E:700 , HOH E:2050
BINDING SITE FOR RESIDUE ZN E 701
6
BC6
SOFTWARE
HIS E:181 , GLN E:232 , HIS E:317 , ASN E:318 , THR E:321 , ARG E:323 , ARG E:328 , TYR E:417
BINDING SITE FOR RESIDUE SO4 E 801
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d2yhea1 (A:30-538)
1b: SCOP_d2yheb1 (B:30-538)
1c: SCOP_d2yhec1 (C:30-538)
1d: SCOP_d2yhed1 (D:30-538)
1e: SCOP_d2yhee1 (E:30-538)
1f: SCOP_d2yhef1 (F:30-538)
2a: SCOP_d2yhea2 (A:539-668)
2b: SCOP_d2yheb2 (B:539-663)
2c: SCOP_d2yhec2 (C:539-663)
2d: SCOP_d2yhed2 (D:539-663)
2e: SCOP_d2yhee2 (E:539-663)
2f: SCOP_d2yhef2 (F:539-663)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Metallo-hydrolase/oxidoreductase
(184)
Superfamily
:
Metallo-hydrolase/oxidoreductase
(184)
Family
:
automated matches
(42)
Protein domain
:
automated matches
(42)
Pseudomonas sp. [TaxId: 1007495]
(3)
1a
d2yhea1
A:30-538
1b
d2yheb1
B:30-538
1c
d2yhec1
C:30-538
1d
d2yhed1
D:30-538
1e
d2yhee1
E:30-538
1f
d2yhef1
F:30-538
Fold
:
SCP-like
(24)
Superfamily
:
SCP-like
(24)
Family
:
automated matches
(6)
Protein domain
:
automated matches
(6)
Pseudomonas sp. [TaxId: 1007495]
(3)
2a
d2yhea2
A:539-668
2b
d2yheb2
B:539-663
2c
d2yhec2
C:539-663
2d
d2yhed2
D:539-663
2e
d2yhee2
E:539-663
2f
d2yhef2
F:539-663
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (634 KB)
Header - Asym.Unit
Biol.Unit 1 (217 KB)
Header - Biol.Unit 1
Biol.Unit 2 (214 KB)
Header - Biol.Unit 2
Biol.Unit 3 (213 KB)
Header - Biol.Unit 3
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