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2Y9W
Biol. Unit 2
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Asym.Unit (377 KB)
Biol.Unit 1 (186 KB)
Biol.Unit 2 (186 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PPO3, A TYROSINASE FROM AGARICUS BISPORUS, IN DEOXY-FORM THAT CONTAINS ADDITIONAL UNKNOWN LECTIN-LIKE SUBUNIT
Authors
:
W. T. Ismaya, H. J. Rozeboom, A. Weijn, J. J. Mes, F. Fusetti, H. J. Wicher B. W. Dijkstra
Date
:
17 Feb 11 (Deposition) - 06 Jul 11 (Release) - 06 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Oxidoreductase, Copper-Containing, Pigmentation, Type-3 Copper Protein
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Reference
:
W. T. Ismaya, H. J. Rozeboom, A. Weijn, J. J. Mes, F. Fusetti, H. J. Wichers, B. W. Dijkstra
Crystal Structure Of Agaricus Bisporus Mushroom Tyrosinase: Identity Of The Tetramer Subunits And Interaction With Tropolone.
Biochemistry V. 50 5477 2011
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
2a: HOLMIUM ATOM (HOa)
2b: HOLMIUM ATOM (HOb)
2c: HOLMIUM ATOM (HOc)
2d: HOLMIUM ATOM (HOd)
2e: HOLMIUM ATOM (HOe)
2f: HOLMIUM ATOM (HOf)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
3c: DI(HYDROXYETHYL)ETHER (PEGc)
4a: TRIETHYLENE GLYCOL (PGEa)
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Label:
No.
Name
Count
Type
Full Name
1
CU
-1
Ligand/Ion
COPPER (II) ION
2
HO
-1
Ligand/Ion
HOLMIUM ATOM
3
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(8, 8)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC7 (SOFTWARE)
3: AC8 (SOFTWARE)
4: AC9 (SOFTWARE)
5: BC1 (SOFTWARE)
6: BC2 (SOFTWARE)
7: BC3 (SOFTWARE)
8: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
GLU A:16 , HOH A:2148 , HOH A:2149 , GLU B:16
BINDING SITE FOR RESIDUE HO A 404
2
AC7
SOFTWARE
HIS B:61 , CYS B:83 , HIS B:85 , HIS B:94 , HOH B:2105
BINDING SITE FOR RESIDUE CU B 400
3
AC8
SOFTWARE
HIS B:259 , HIS B:263 , HIS B:296 , HOH B:2105
BINDING SITE FOR RESIDUE CU B 401
4
AC9
SOFTWARE
ASP B:312 , ASP B:336 , GLN B:351 , ASP B:353 , HO B:404 , HOH B:2159 , HOH B:2160
BINDING SITE FOR RESIDUE HO B 402
5
BC1
SOFTWARE
GLU B:335 , HO B:404
BINDING SITE FOR RESIDUE HO B 403
6
BC2
SOFTWARE
GLU B:335 , ASP B:336 , ASP B:353 , HO B:402 , HO B:403
BINDING SITE FOR RESIDUE HO B 404
7
BC3
SOFTWARE
GLU B:356 , ASP B:357 , GLU B:359
BINDING SITE FOR RESIDUE PEG B1393
8
BC5
SOFTWARE
TYR B:236 , HIS D:56 , TYR D:58 , LYS D:63 , TRP D:72 , PHE D:87
BINDING SITE FOR RESIDUE PGE D1151
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TYROSINASE_2 (B:289-300)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TYROSINASE_2
PS00498
Tyrosinase and hemocyanins CuB-binding region signature.
PPO3_AGABI
289-300
1
-
B:289-300
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (377 KB)
Header - Asym.Unit
Biol.Unit 1 (186 KB)
Header - Biol.Unit 1
Biol.Unit 2 (186 KB)
Header - Biol.Unit 2
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