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Getting 'Biological Unit' information from database.
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2Y6C
Biol. Unit 1
Info
Asym.Unit (35 KB)
Biol.Unit 1 (112 KB)
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(1)
Title
:
THE DISCOVERY OF MMP7 INHIBITORS EXPLOITING A NOVEL SELECTIVITY TRIGGER
Authors
:
K. Edman, M. Furber, P. Hemsley, C. Johansson, G. Pairaudeau, J. Peters M. Stocks, A. Tervo, A. Ward, E. Wells, L. Wissler
Date
:
20 Jan 11 (Deposition) - 04 May 11 (Release) - 04 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Edman, M. Furber, P. Hemsley, C. Johansson, G. Pairaudeau, J. Petersen, M. Stocks, A. Tervo, A. Ward, E. Wells, L. Wissler
The Discovery Of Mmp7 Inhibitors Exploiting A Novel Selectivity Trigger.
Chemmedchem V. 6 769 2011
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: SULFATE ION (SO4a)
3a: N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PH... (TQIa)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
SO4
4
Ligand/Ion
SULFATE ION
3
TQI
4
Ligand/Ion
N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]SULFONYL}-L-TRYPTOPHAN
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:158 , GLY A:190 , GLY A:192 , ASP A:194 , HOH A:2036 , HOH A:2052
BINDING SITE FOR RESIDUE CA A1264
2
AC2
SOFTWARE
ASP A:175 , GLY A:176 , GLY A:178 , THR A:180 , ASP A:198 , GLU A:201
BINDING SITE FOR RESIDUE CA A1265
3
AC3
SOFTWARE
HIS A:168 , ASP A:170 , HIS A:183 , HIS A:196
BINDING SITE FOR RESIDUE ZN A1266
4
AC4
SOFTWARE
HIS A:219 , HIS A:223 , HIS A:229 , TQI A:1269
BINDING SITE FOR RESIDUE ZN A1267
5
AC5
SOFTWARE
ALA A:167 , HIS A:168 , GLY A:169 , ASP A:170 , LEU A:181 , ILE A:211 , TYR A:241
BINDING SITE FOR RESIDUE SO4 A1268
6
AC6
SOFTWARE
LEU A:181 , ALA A:182 , HIS A:183 , ALA A:184 , ALA A:216 , HIS A:219 , GLU A:220 , HIS A:223 , HIS A:229 , PRO A:239 , TYR A:241 , ZN A:1267 , HOH A:2079
BINDING SITE FOR RESIDUE TQI A1269
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SAPs(SNPs)/Variants
(2, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_021027 (G142D, chain A, )
2: VAR_021028 (P246L, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021027
G
137
D
MMP7_HUMAN
Polymorphism
17884789
A
G
142
D
2
UniProt
VAR_021028
P
241
L
MMP7_HUMAN
Polymorphism
17886506
A
P
246
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:216-225)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
MMP7_HUMAN
211-220
4
A:216-225
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2y6ca_ (A:)
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Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Matrix metalloproteases, catalytic domain
(199)
Protein domain
:
automated matches
(32)
Human (Homo sapiens) [TaxId: 9606]
(32)
1a
d2y6ca_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Peptidase_M10_2y6cA01 (A:108-263)
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Clans
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Families
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)
(
)
Organisms
(
)
(
)
Clan
:
Peptidase_MA
(251)
Family
:
Peptidase_M10
(85)
Homo sapiens (Human)
(82)
1a
Peptidase_M10-2y6cA01
A:108-263
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Chain A
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Asymmetric Unit 3
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Asym.Unit (35 KB)
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