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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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2Y6C
Asym. Unit
Info
Asym.Unit (35 KB)
Biol.Unit 1 (112 KB)
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(1)
Title
:
THE DISCOVERY OF MMP7 INHIBITORS EXPLOITING A NOVEL SELECTIVITY TRIGGER
Authors
:
K. Edman, M. Furber, P. Hemsley, C. Johansson, G. Pairaudeau, J. Peters M. Stocks, A. Tervo, A. Ward, E. Wells, L. Wissler
Date
:
20 Jan 11 (Deposition) - 04 May 11 (Release) - 04 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Edman, M. Furber, P. Hemsley, C. Johansson, G. Pairaudeau, J. Petersen, M. Stocks, A. Tervo, A. Ward, E. Wells, L. Wissler
The Discovery Of Mmp7 Inhibitors Exploiting A Novel Selectivity Trigger.
Chemmedchem V. 6 769 2011
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Hetero Components
(4, 6)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: SULFATE ION (SO4a)
3a: N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PH... (TQIa)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
2
SO4
1
Ligand/Ion
SULFATE ION
3
TQI
1
Ligand/Ion
N-{[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]SULFONYL}-L-TRYPTOPHAN
4
ZN
2
Ligand/Ion
ZINC ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:158 , GLY A:190 , GLY A:192 , ASP A:194 , HOH A:2036 , HOH A:2052
BINDING SITE FOR RESIDUE CA A1264
2
AC2
SOFTWARE
ASP A:175 , GLY A:176 , GLY A:178 , THR A:180 , ASP A:198 , GLU A:201
BINDING SITE FOR RESIDUE CA A1265
3
AC3
SOFTWARE
HIS A:168 , ASP A:170 , HIS A:183 , HIS A:196
BINDING SITE FOR RESIDUE ZN A1266
4
AC4
SOFTWARE
HIS A:219 , HIS A:223 , HIS A:229 , TQI A:1269
BINDING SITE FOR RESIDUE ZN A1267
5
AC5
SOFTWARE
ALA A:167 , HIS A:168 , GLY A:169 , ASP A:170 , LEU A:181 , ILE A:211 , TYR A:241
BINDING SITE FOR RESIDUE SO4 A1268
6
AC6
SOFTWARE
LEU A:181 , ALA A:182 , HIS A:183 , ALA A:184 , ALA A:216 , HIS A:219 , GLU A:220 , HIS A:223 , HIS A:229 , PRO A:239 , TYR A:241 , ZN A:1267 , HOH A:2079
BINDING SITE FOR RESIDUE TQI A1269
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021027 (G142D, chain A, )
2: VAR_021028 (P246L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021027
G
137
D
MMP7_HUMAN
Polymorphism
17884789
A
G
142
D
2
UniProt
VAR_021028
P
241
L
MMP7_HUMAN
Polymorphism
17886506
A
P
246
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:216-225)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
MMP7_HUMAN
211-220
1
A:216-225
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:99-117)
Exon 1.3a (A:117-167)
Exon 1.4a (A:167-210)
Exon 1.5 (A:210-263 (gaps))
View:
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All Exon Boundaries
1: Boundary 1.1a/1.2
2: Boundary 1.2/1.3a
3: Boundary 1.3a/1.4a
4: Boundary 1.4a/1.5
5: Boundary 1.5/1.6
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000260227
1a
ENSE00002145134
chr11:
102401484-102401324
161
MMP7_HUMAN
1-36
36
0
-
-
1.2
ENST00000260227
2
ENSE00000930299
chr11:
102398714-102398488
227
MMP7_HUMAN
37-112
76
1
A:99-117
19
1.3a
ENST00000260227
3a
ENSE00000930298
chr11:
102398403-102398255
149
MMP7_HUMAN
112-162
51
1
A:117-167
51
1.4a
ENST00000260227
4a
ENSE00000930297
chr11:
102395795-102395667
129
MMP7_HUMAN
162-205
44
1
A:167-210
44
1.5
ENST00000260227
5
ENSE00000930296
chr11:
102394132-102393971
162
MMP7_HUMAN
205-259
55
1
A:210-263 (gaps)
54
1.6
ENST00000260227
6
ENSE00001252223
chr11:
102391535-102391239
297
MMP7_HUMAN
259-267
9
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2y6ca_ (A:)
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Classes
(
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Folds
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Matrix metalloproteases, catalytic domain
(199)
Protein domain
:
automated matches
(32)
Human (Homo sapiens) [TaxId: 9606]
(32)
1a
d2y6ca_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Peptidase_M10_2y6cA01 (A:108-263)
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Clans
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Organisms
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)
(
)
Clan
:
Peptidase_MA
(251)
Family
:
Peptidase_M10
(85)
Homo sapiens (Human)
(82)
1a
Peptidase_M10-2y6cA01
A:108-263
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Chain A
Asymmetric Unit 1
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Asym.Unit (35 KB)
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