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2Y5L
Biol. Unit 2
Info
Asym.Unit (414 KB)
Biol.Unit 1 (207 KB)
Biol.Unit 2 (206 KB)
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(1)
Title
:
ORALLY ACTIVE AMINOPYRIDINES AS INHIBITORS OF TETRAMERIC FRUCTOSE 1,6-BISPHOSPHATASE
Authors
:
A. Ruf, P. Hebeisen, W. Haap, B. Kuhn, P. Mohr, H. P. Wessel, U. Zutter, S. J. Benz, C. Joseph, R. Alvarez-Sanchez, M. Gubler, B. Schott, A. Benar E. Tozzo, E. Kitas
Date
:
14 Jan 11 (Deposition) - 18 May 11 (Release) - 01 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
P. Hebeisen, W. Haap, B. Kuhn, P. Mohr, H. P. Wessel, U. Zutter, S. Kirchner, A. Ruf, J. Benz, C. Joseph, R. Alvarez-Sanchez, M. Gubler B. Schott, A. Benardeau, E. Tozzo, E. Kitas
Orally Active Aminopyridines As Inhibitors Of Tetrameric Fructose-1, 6-Bisphosphatase.
Bioorg. Med. Chem. Lett. V. 21 3237 2011
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8a)
1b: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8b)
1c: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8c)
1d: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8d)
1e: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8e)
1f: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8f)
1g: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8g)
1h: N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)... (RO8h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
RO8
4
Ligand/Ion
N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)-YLIDENE]CARBAMOYL}-3-CHLOROBENZENESULFONAMIDE
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Sites
(4, 4)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
VAL E:17 , MET E:18 , GLY E:21 , ARG E:22 , GLY E:26 , THR E:27 , GLY E:28 , GLU E:29 , LEU E:30 , THR E:31 , MET E:177 , HOH E:2001 , THR G:27 , GLY G:28 , RO8 G:1000
BINDING SITE FOR RESIDUE RO8 E1000
2
AC6
SOFTWARE
VAL F:17 , MET F:18 , GLY F:21 , ARG F:22 , GLY F:26 , THR F:27 , GLY F:28 , GLU F:29 , LEU F:30 , THR F:31 , HOH F:2014 , THR H:27
BINDING SITE FOR RESIDUE RO8 F1000
3
AC7
SOFTWARE
THR E:27 , GLY E:28 , RO8 E:1000 , VAL G:17 , MET G:18 , GLY G:21 , ARG G:22 , GLY G:26 , THR G:27 , GLY G:28 , GLU G:29 , LEU G:30 , THR G:31 , HOH G:2020
BINDING SITE FOR RESIDUE RO8 G1000
4
AC8
SOFTWARE
THR F:27 , GLY F:28 , VAL H:17 , MET H:18 , GLY H:21 , ARG H:22 , GLY H:26 , THR H:27 , GLY H:28 , GLU H:29 , LEU H:30 , THR H:31
BINDING SITE FOR RESIDUE RO8 H1000
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SAPs(SNPs)/Variants
(8, 32)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_002380 (G163S, chain E/F/G/H, )
2: VAR_002381 (A176D, chain E/F/G/H, )
3: VAR_038812 (F193S, chain E/F/G/H, )
4: VAR_022212 (K217K, chain E/F/G/H, )
5: VAR_022213 (F232I, chain E/F/G/H, )
6: VAR_022214 (R254L, chain E/F/G/H, )
7: VAR_038813 (P283R, chain E/F/G/H, )
8: VAR_002382 (V324A, chain E/F/G/H, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_002380
G
164
S
F16P1_HUMAN
Disease (FBPD)
---
E/F/G/H
G
163
S
2
UniProt
VAR_002381
A
177
D
F16P1_HUMAN
Disease (FBPD)
---
E/F/G/H
A
176
D
3
UniProt
VAR_038812
F
194
S
F16P1_HUMAN
Disease (FBPD)
---
E/F/G/H
F
193
S
4
UniProt
VAR_022212
R
218
K
F16P1_HUMAN
Polymorphism
1769259
E/F/G/H
K
217
K
5
UniProt
VAR_022213
F
233
I
F16P1_HUMAN
Polymorphism
2297085
E/F/G/H
F
232
I
6
UniProt
VAR_022214
R
255
L
F16P1_HUMAN
Polymorphism
28369761
E/F/G/H
R
254
L
7
UniProt
VAR_038813
P
284
R
F16P1_HUMAN
Disease (FBPD)
---
E/F/G/H
P
283
R
8
UniProt
VAR_002382
V
325
A
F16P1_HUMAN
Polymorphism
---
E/F/G/H
V
324
A
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: FBPASE (E:273-285,F:273-285,G:273-285,H:27...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FBPASE
PS00124
Fructose-1-6-bisphosphatase active site.
F16P1_HUMAN
274-286
4
-
-
-
-
E:273-285
F:273-285
G:273-285
H:273-285
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d2y5la_ (A:)
1b: SCOP_d2y5lb_ (B:)
1c: SCOP_d2y5lc_ (C:)
1d: SCOP_d2y5ld_ (D:)
1e: SCOP_d2y5le_ (E:)
1f: SCOP_d2y5lf_ (F:)
1g: SCOP_d2y5lg_ (G:)
1h: SCOP_d2y5lh_ (H:)
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Protein Domains
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Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Carbohydrate phosphatase
(140)
Superfamily
:
Carbohydrate phosphatase
(140)
Family
:
Inositol monophosphatase/fructose-1,6-bisphosphatase-like
(121)
Protein domain
:
automated matches
(20)
Human (Homo sapiens) [TaxId: 9606]
(17)
1a
d2y5la_
A:
1b
d2y5lb_
B:
1c
d2y5lc_
C:
1d
d2y5ld_
D:
1e
d2y5le_
E:
1f
d2y5lf_
F:
1g
d2y5lg_
G:
1h
d2y5lh_
H:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_FBPase_2y5lH01 (H:11-334)
1b: PFAM_FBPase_2y5lH02 (H:11-334)
1c: PFAM_FBPase_2y5lH03 (H:11-334)
1d: PFAM_FBPase_2y5lH04 (H:11-334)
1e: PFAM_FBPase_2y5lH05 (H:11-334)
1f: PFAM_FBPase_2y5lH06 (H:11-334)
1g: PFAM_FBPase_2y5lH07 (H:11-334)
1h: PFAM_FBPase_2y5lH08 (H:11-334)
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(
)
Clan
:
Phospoesterase
(42)
Family
:
FBPase
(32)
Homo sapiens (Human)
(9)
1a
FBPase-2y5lH01
H:11-334
1b
FBPase-2y5lH02
H:11-334
1c
FBPase-2y5lH03
H:11-334
1d
FBPase-2y5lH04
H:11-334
1e
FBPase-2y5lH05
H:11-334
1f
FBPase-2y5lH06
H:11-334
1g
FBPase-2y5lH07
H:11-334
1h
FBPase-2y5lH08
H:11-334
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Asymmetric Unit 1
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