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2Y2P
Asym. Unit
Info
Asym.Unit (164 KB)
Biol.Unit 1 (312 KB)
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(1)
Title
:
PENICILLIN-BINDING PROTEIN 1B (PBP-1B) IN COMPLEX WITH AN ALKYL BORONATE (Z10)
Authors
:
C. Contreras-Martel, A. Amoroso, E. C. Woon, A. Zervosen, S. Inglis, A. O. Verlaine, A. Rydzik, V. Job, A. Luxen, B. Joris, C. J. Schofield, A. D
Date
:
15 Dec 10 (Deposition) - 03 Aug 11 (Release) - 28 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.62
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Transferase, Cell Wall, Peptidoglycan, Inhibitor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Contreras-Martel, A. Amoroso, E. C. Woon, A. Zervosen, S. Inglis, A. Martins, O. Verlaine, A. Rydzik, V. Job, A. Luxen, B. Joris, C. J. Schofield, A. Dessen
Structure-Guided Design Of Cell Wall Biosynthesis Inhibitors That Overcome Beta-Lactam Resistance In Staphylococcus Aureus (Mrsa).
Acs Chem. Biol. V. 6 943 2011
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Hetero Components
(3, 22)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
1n: CHLORIDE ION (CLn)
1o: CHLORIDE ION (CLo)
1p: CHLORIDE ION (CLp)
1q: CHLORIDE ION (CLq)
1r: CHLORIDE ION (CLr)
1s: CHLORIDE ION (CLs)
1t: CHLORIDE ION (CLt)
2a: SODIUM ION (NAa)
3a: [(1S)-1-[(2-FLUORO-6-PHENYL-PHENYL... (Z10a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
20
Ligand/Ion
CHLORIDE ION
2
NA
1
Ligand/Ion
SODIUM ION
3
Z10
1
Ligand/Ion
[(1S)-1-[(2-FLUORO-6-PHENYL-PHENYL)CARBONYLAMINO]ETHYL]-TRIHYDROXY-BORON
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:459 , SER A:460 , TYR A:498 , SER A:516 , ASN A:518 , GLY A:653 , THR A:654 , THR A:655 , GLY A:656 , ASP A:658 , NA A:1300
BINDING SITE FOR RESIDUE Z10 A1000
02
AC2
SOFTWARE
ARG A:529
BINDING SITE FOR RESIDUE CL A1200
03
AC3
SOFTWARE
VAL A:535 , LYS A:536 , HOH A:2123
BINDING SITE FOR RESIDUE CL A1201
04
AC4
SOFTWARE
SER A:625 , ARG A:627 , LYS A:633 , HOH A:2200
BINDING SITE FOR RESIDUE CL A1202
05
AC5
SOFTWARE
ASP A:593 , ARG A:595
BINDING SITE FOR RESIDUE CL A1206
06
AC6
SOFTWARE
GLU A:727 , LYS A:735
BINDING SITE FOR RESIDUE CL A1208
07
AC7
SOFTWARE
TYR A:544 , GLU A:545 , HOH A:2138 , HOH A:2151 , HOH A:2154
BINDING SITE FOR RESIDUE CL A1211
08
AC8
SOFTWARE
GLU A:346 , HIS A:584 , VAL A:585 , ILE A:586 , HOH A:2169
BINDING SITE FOR RESIDUE CL A1212
09
AC9
SOFTWARE
ASP A:337 , LEU A:339 , HIS A:399 , GLN A:403
BINDING SITE FOR RESIDUE CL A1213
10
BC1
SOFTWARE
LYS A:610 , HOH A:2184
BINDING SITE FOR RESIDUE CL A1214
11
BC2
SOFTWARE
TYR A:110 , SER A:111 , ASP A:112 , GLN A:396
BINDING SITE FOR RESIDUE CL A1216
12
BC3
SOFTWARE
ASN A:759 , LYS A:760 , SER A:761
BINDING SITE FOR RESIDUE CL A1217
13
BC4
SOFTWARE
SER A:775 , ASP A:776 , ALA A:777
BINDING SITE FOR RESIDUE CL A1218
14
BC5
SOFTWARE
ALA A:718 , LEU A:719
BINDING SITE FOR RESIDUE CL A1220
15
BC6
SOFTWARE
ASN A:449
BINDING SITE FOR RESIDUE CL A1224
16
BC7
SOFTWARE
ARG A:358 , ASN A:645 , HOH A:2205
BINDING SITE FOR RESIDUE CL A1227
17
BC8
SOFTWARE
ASP A:679 , ASP A:680 , HOH A:2218
BINDING SITE FOR RESIDUE CL A1229
18
BC9
SOFTWARE
SER A:553 , HOH A:2148
BINDING SITE FOR RESIDUE CL A1230
19
CC1
SOFTWARE
THR A:488 , ASN A:489
BINDING SITE FOR RESIDUE CL A1231
20
CC2
SOFTWARE
GLY A:773 , HOH A:2120
BINDING SITE FOR RESIDUE CL A1235
21
CC3
SOFTWARE
THR A:652 , GLY A:653 , THR A:654 , Z10 A:1000
BINDING SITE FOR RESIDUE NA A1300
22
CC4
SOFTWARE
SER A:634
BINDING SITE FOR RESIDUE CL A1791
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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Asym.Unit (164 KB)
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