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2Y25
Asym. Unit
Info
Asym.Unit (424 KB)
Biol.Unit 1 (415 KB)
Biol.Unit 2 (416 KB)
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Title
:
CRYSTAL STRUCTURE OF THE MYOMESIN DOMAINS MY11-MY13
Authors
:
N. Pinotsis, S. D. Chatziefthimiou, M. Wilmanns
Date
:
13 Dec 10 (Deposition) - 21 Dec 11 (Release) - 07 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (2x)
Biol. Unit 2: C,D (2x)
Keywords
:
Structural Protein, Sarcomere, M-Band, Immunoglobulin-Like Domain
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Pinotsis, S. D. Chatziefthimiou, F. Berkemeier, F. Beuron, I. M. Mavridis, P. V. Konarev, D. I. Svergun, E. Morris, M. Rief, M. Wilmanns
Superhelical Architecture Of The Myosin Filament-Linking Protein Myomesin With Unusual Elastic Properties.
Plos Biol. V. 10 1261 2012
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_047227 (D1408N, chain B/D, )
2: VAR_047228 (M1453T, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_047227
D
1408
N
MYOM1_HUMAN
Polymorphism
3765623
B/D
D
1408
N
2
UniProt
VAR_047228
M
1453
T
MYOM1_HUMAN
Polymorphism
16944397
A/B/C/D
M
1453
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
Sorry, no Info available
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Exons
(12, 48)
Info
All Exons
Exon 1.27 (A:1352-1356 | B:1353-1354 | C:1352...)
Exon 1.28 (A:1357-1357 | B:1354-1357 (gaps) |...)
Exon 1.29 (A:1357-1379 | B:1357-1379 | C:1357...)
Exon 1.30 (A:1380-1417 (gaps) | B:1380-1417 |...)
Exon 1.31 (A:1418-1447 | B:1418-1447 | C:1418...)
Exon 1.32 (A:1447-1460 | B:1447-1460 | C:1447...)
Exon 1.33 (A:1460-1495 | B:1460-1495 | C:1460...)
Exon 1.34 (A:1495-1550 | B:1495-1550 | C:1495...)
Exon 1.35 (A:1550-1562 | B:1550-1562 | C:1550...)
Exon 1.36 (A:1562-1570 | B:1562-1570 | C:1562...)
Exon 1.37 (A:1570-1588 | B:1570-1588 | C:1570...)
Exon 1.38 (A:1589-1666 | B:1589-1666 | C:1589...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.26b/1.27
02: Boundary 1.27/1.28
03: Boundary 1.28/1.29
04: Boundary 1.29/1.30
05: Boundary 1.30/1.31
06: Boundary 1.31/1.32
07: Boundary 1.32/1.33
08: Boundary 1.33/1.34
09: Boundary 1.34/1.35
10: Boundary 1.35/1.36
11: Boundary 1.36/1.37
12: Boundary 1.37/1.38
13: Boundary 1.38/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000356443
1
ENSE00001400333
chr18:
3220106-3219801
306
MYOM1_HUMAN
-
0
0
-
-
1.2
ENST00000356443
2
ENSE00001543713
chr18:
3215249-3214932
318
MYOM1_HUMAN
1-97
97
0
-
-
1.3
ENST00000356443
3
ENSE00001403202
chr18:
3193956-3193816
141
MYOM1_HUMAN
97-144
48
0
-
-
1.4
ENST00000356443
4
ENSE00001240625
chr18:
3189085-3188746
340
MYOM1_HUMAN
144-257
114
0
-
-
1.5
ENST00000356443
5
ENSE00001240622
chr18:
3187635-3187478
158
MYOM1_HUMAN
258-310
53
0
-
-
1.6
ENST00000356443
6
ENSE00001240619
chr18:
3176132-3176040
93
MYOM1_HUMAN
310-341
32
0
-
-
1.7
ENST00000356443
7
ENSE00001240615
chr18:
3174206-3174118
89
MYOM1_HUMAN
341-371
31
0
-
-
1.8
ENST00000356443
8
ENSE00001240608
chr18:
3173998-3173936
63
MYOM1_HUMAN
371-392
22
0
-
-
1.9
ENST00000356443
9
ENSE00001240603
chr18:
3168979-3168815
165
MYOM1_HUMAN
392-447
56
0
-
-
1.10
ENST00000356443
10
ENSE00001240598
chr18:
3164437-3164276
162
MYOM1_HUMAN
447-501
55
0
-
-
1.11
ENST00000356443
11
ENSE00001240595
chr18:
3155086-3154945
142
MYOM1_HUMAN
501-548
48
0
-
-
1.12
ENST00000356443
12
ENSE00001240590
chr18:
3151891-3151692
200
MYOM1_HUMAN
548-615
68
0
-
-
1.13
ENST00000356443
13
ENSE00001240585
chr18:
3149199-3149143
57
MYOM1_HUMAN
615-634
20
0
-
-
1.14
ENST00000356443
14
ENSE00001240581
chr18:
3142061-3141937
125
MYOM1_HUMAN
634-675
42
0
-
-
1.15
ENST00000356443
15
ENSE00001240577
chr18:
3135728-3135545
184
MYOM1_HUMAN
676-737
62
0
-
-
1.16
ENST00000356443
16
ENSE00001240573
chr18:
3134822-3134648
175
MYOM1_HUMAN
737-795
59
0
-
-
1.17
ENST00000356443
17
ENSE00001240567
chr18:
3131494-3131373
122
MYOM1_HUMAN
795-836
42
0
-
-
1.18
ENST00000356443
18
ENSE00001413714
chr18:
3129517-3129230
288
MYOM1_HUMAN
836-932
97
0
-
-
1.19
ENST00000356443
19
ENSE00001240558
chr18:
3126895-3126699
197
MYOM1_HUMAN
932-997
66
0
-
-
1.20
ENST00000356443
20
ENSE00001240553
chr18:
3119993-3119867
127
MYOM1_HUMAN
998-1040
43
0
-
-
1.21
ENST00000356443
21
ENSE00001240549
chr18:
3116513-3116329
185
MYOM1_HUMAN
1040-1101
62
0
-
-
1.22
ENST00000356443
22
ENSE00001240541
chr18:
3112410-3112296
115
MYOM1_HUMAN
1102-1140
39
0
-
-
1.23
ENST00000356443
23
ENSE00001240535
chr18:
3102628-3102472
157
MYOM1_HUMAN
1140-1192
53
0
-
-
1.24
ENST00000356443
24
ENSE00001240526
chr18:
3100424-3100318
107
MYOM1_HUMAN
1192-1228
37
0
-
-
1.25
ENST00000356443
25
ENSE00001240522
chr18:
3100201-3100157
45
MYOM1_HUMAN
1228-1243
16
0
-
-
1.26b
ENST00000356443
26b
ENSE00001240516
chr18:
3094304-3094168
137
MYOM1_HUMAN
1243-1288
46
0
-
-
1.27
ENST00000356443
27
ENSE00001592917
chr18:
3090800-3090656
145
MYOM1_HUMAN
1289-1337
49
4
A:1352-1356
B:1353-1354
C:1352-1356
D:1353-1354
5
2
5
2
1.28
ENST00000356443
28
ENSE00001709505
chr18:
3089594-3089535
60
MYOM1_HUMAN
1337-1357
21
4
A:1357-1357
B:1354-1357 (gaps)
C:1357-1357
D:1354-1357 (gaps)
1
21
1
21
1.29
ENST00000356443
29
ENSE00001645638
chr18:
3089239-3089172
68
MYOM1_HUMAN
1357-1379
23
4
A:1357-1379
B:1357-1379
C:1357-1379
D:1357-1379
23
23
23
23
1.30
ENST00000356443
30
ENSE00001692605
chr18:
3086149-3086036
114
MYOM1_HUMAN
1380-1417
38
4
A:1380-1417 (gaps)
B:1380-1417
C:1380-1417 (gaps)
D:1380-1417
38
38
38
38
1.31
ENST00000356443
31
ENSE00001738311
chr18:
3085130-3085043
88
MYOM1_HUMAN
1418-1447
30
4
A:1418-1447
B:1418-1447
C:1418-1447
D:1418-1447
30
30
30
30
1.32
ENST00000356443
32
ENSE00001676386
chr18:
3084025-3083987
39
MYOM1_HUMAN
1447-1460
14
4
A:1447-1460
B:1447-1460
C:1447-1460
D:1447-1460
14
14
14
14
1.33
ENST00000356443
33
ENSE00001782333
chr18:
3083892-3083787
106
MYOM1_HUMAN
1460-1495
36
4
A:1460-1495
B:1460-1495
C:1460-1495
D:1460-1495
36
36
36
36
1.34
ENST00000356443
34
ENSE00001735824
chr18:
3079340-3079177
164
MYOM1_HUMAN
1495-1550
56
4
A:1495-1550
B:1495-1550
C:1495-1550
D:1495-1550
56
56
56
56
1.35
ENST00000356443
35
ENSE00001803821
chr18:
3075759-3075723
37
MYOM1_HUMAN
1550-1562
13
4
A:1550-1562
B:1550-1562
C:1550-1562
D:1550-1562
13
13
13
13
1.36
ENST00000356443
36
ENSE00001731412
chr18:
3075474-3075452
23
MYOM1_HUMAN
1562-1570
9
4
A:1562-1570
B:1562-1570
C:1562-1570
D:1562-1570
9
9
9
9
1.37
ENST00000356443
37
ENSE00001618984
chr18:
3071887-3071832
56
MYOM1_HUMAN
1570-1588
19
4
A:1570-1588
B:1570-1588
C:1570-1588
D:1570-1588
19
19
19
19
1.38
ENST00000356443
38
ENSE00001615622
chr18:
3067553-3066805
749
MYOM1_HUMAN
1589-1685
97
4
A:1589-1666
B:1589-1666
C:1589-1666
D:1589-1666
78
78
78
78
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Asym.Unit (424 KB)
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