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2Y01
Biol. Unit 1
Info
Asym.Unit (113 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (55 KB)
Biol.Unit 3 (104 KB)
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(1)
Title
:
TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102)
Authors
:
A. Warne, R. Moukhametzianov, J. G. Baker, R. Nehme, P. C. Edwards, A. G. G. F. X. Schertler, C. G. Tate
Date
:
30 Nov 10 (Deposition) - 30 Mar 11 (Release) - 17 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Receptor, G Protein Coupled Receptor, Seven-Helix Receptor, Integral Membrane Protein, Thermostabilising Point Mutations, Gpcr, 7Tm Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. Warne, R. Moukhametzianov, J. G. Baker, R. Nehme, P. C. Edwards, A. G. W. Leslie, G. F. X. Schertler, C. G. Tate
The Structural Basis For Agonist And Partial Agonist Action On A Beta1-Adrenergic Receptor
Nature V. 469 241 2011
(for further references see the
PDB file header
)
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: HEGA-10 (2CVa)
1b: HEGA-10 (2CVb)
1c: HEGA-10 (2CVc)
1d: HEGA-10 (2CVd)
1e: HEGA-10 (2CVe)
1f: HEGA-10 (2CVf)
1g: HEGA-10 (2CVg)
1h: HEGA-10 (2CVh)
1i: HEGA-10 (2CVi)
1j: HEGA-10 (2CVj)
2a: DOBUTAMINE (Y00a)
2b: DOBUTAMINE (Y00b)
3a: CHOLESTEROL HEMISUCCINATE (Y01a)
3b: CHOLESTEROL HEMISUCCINATE (Y01b)
3c: CHOLESTEROL HEMISUCCINATE (Y01c)
3d: CHOLESTEROL HEMISUCCINATE (Y01d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2CV
5
Ligand/Ion
HEGA-10
2
Y00
1
Ligand/Ion
DOBUTAMINE
3
Y01
2
Ligand/Ion
CHOLESTEROL HEMISUCCINATE
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC2 (SOFTWARE)
11: BC4 (SOFTWARE)
12: BC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:157 , ILE A:161 , HOH A:2019 , ARG B:205 , ALA B:206 , 2CV B:501
BINDING SITE FOR RESIDUE Y01 A 401
02
AC2
SOFTWARE
GLY A:67 , LEU A:78 , TRP A:166
BINDING SITE FOR RESIDUE Y01 A 402
03
AC3
SOFTWARE
HIS A:180 , TRP A:181 , ARG A:183 , ASP A:184 , ASN A:204 , HOH A:2020 , VAL B:160 , THR B:164 , Y01 B:401 , 2CV B:505
BINDING SITE FOR RESIDUE 2CV A 501
04
AC4
SOFTWARE
LEU A:289
BINDING SITE FOR RESIDUE 2CV A 502
05
AC5
SOFTWARE
ARG A:205 , VAL A:314 , PHE A:315 , LEU B:152 , ARG B:157 , Y01 B:401
BINDING SITE FOR RESIDUE 2CV A 503
06
AC6
SOFTWARE
VAL A:51 , VAL A:326 , MET A:338 , Y00 A:601
BINDING SITE FOR RESIDUE 2CV A 504
07
AC7
SOFTWARE
LYS A:159 , VAL A:160 , CYS A:163 , GLU B:185 , 2CV B:501
BINDING SITE FOR RESIDUE 2CV A 505
08
AC8
SOFTWARE
ASP A:121 , SER A:211 , PHE A:306 , PHE A:307 , ASN A:310 , ASN A:329 , TRP A:330 , TYR A:333 , 2CV A:504
BINDING SITE FOR RESIDUE Y00 A 601
09
AC9
SOFTWARE
ALA A:206 , 2CV A:501 , 2CV A:503 , HOH A:2020 , CYS B:133 , ARG B:157 , VAL B:160 , ILE B:214
BINDING SITE FOR RESIDUE Y01 B 401
10
BC2
SOFTWARE
VAL A:160 , THR A:164 , Y01 A:401 , 2CV A:505 , PRO B:176 , TRP B:181 , ASP B:184 , GLU B:185
BINDING SITE FOR RESIDUE 2CV B 501
11
BC4
SOFTWARE
ARG A:157 , PHE B:315
BINDING SITE FOR RESIDUE 2CV B 503
12
BC6
SOFTWARE
GLU A:185 , 2CV A:501 , LYS B:159 , VAL B:160 , CYS B:163 , TRP B:166
BINDING SITE FOR RESIDUE 2CV B 505
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_PROTEIN_RECEP_F1_1 (A:127-143)
;
View:
Select:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_PROTEIN_RECEP_F1_1
PS00237
G-protein coupled receptors family 1 signature.
ADRB1_MELGA
127-143
1
A:127-143
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_7tm_1_2y01B01 (B:58-343)
1b: PFAM_7tm_1_2y01B02 (B:58-343)
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Clans
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(
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Families
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(
)
Organisms
(
)
(
)
Clan
:
GPCR_A
(90)
Family
:
7tm_1
(47)
Meleagris gallopavo (Common turkey)
(10)
1a
7tm_1-2y01B01
B:58-343
1b
7tm_1-2y01B02
B:58-343
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (113 KB)
Header - Asym.Unit
Biol.Unit 1 (53 KB)
Header - Biol.Unit 1
Biol.Unit 2 (55 KB)
Header - Biol.Unit 2
Biol.Unit 3 (104 KB)
Header - Biol.Unit 3
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