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2XYT
Biol. Unit 1
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Asym.Unit (752 KB)
Biol.Unit 1 (373 KB)
Biol.Unit 2 (374 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF APLYSIA CALIFORNICA ACHBP IN COMPLEX WITH D-TUBOCURARINE
Authors
:
M. Brams, A. Pandya, D. Kuzmin, R. Van Elk, L. Krijnen, J. L. Yakel, V. Ts A. B. Smit, C. Ulens
Date
:
19 Nov 10 (Deposition) - 23 Mar 11 (Release) - 28 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Receptor, Amidation, Conformational Flexibility, Conotoxin, Neurotoxin Nicotinic, Postsynaptic Neurotoxin, Receptor/Toxin Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Brams, A. Pandya, D. Kuzmin, R. Van Elk, L. Krijnen, J. L. Yakel, V. Tsetlin, A. B. Smit, C. Ulens
A Structural And Mutagenic Blueprint For Molecular Recognition Of Strychnine And D-Tubocurarine By Different Cys-Loop Receptors.
Plos Biol. V. 9 1034 2011
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: D-TUBOCURARINE (TC9a)
1b: D-TUBOCURARINE (TC9b)
1c: D-TUBOCURARINE (TC9c)
1d: D-TUBOCURARINE (TC9d)
1e: D-TUBOCURARINE (TC9e)
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No.
Name
Count
Type
Full Name
1
TC9
2
Ligand/Ion
D-TUBOCURARINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR B:91 , SER B:92 , ALA B:139 , LYS B:141 , TRP B:145 , TYR B:186 , HOH B:2117 , HOH B:2169 , HOH B:2170 , THR C:34 , TYR C:53 , GLN C:55 , SER C:164 , SER C:165 , TYR C:166 , SER G:187 , HOH G:2188
BINDING SITE FOR RESIDUE TC9 B1206
2
AC2
SOFTWARE
TRP D:145 , TYR D:186 , CYS D:188 , CYS D:189 , GLU D:191 , TYR D:193 , THR E:34 , TYR E:53 , GLN E:55 , ARG E:57 , MET E:114 , SER E:165
BINDING SITE FOR RESIDUE TC9 D1206
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d2xyta_ (A:)
1b: SCOP_d2xytb_ (B:)
1c: SCOP_d2xytc_ (C:)
1d: SCOP_d2xytd_ (D:)
1e: SCOP_d2xyte_ (E:)
1f: SCOP_d2xytf_ (F:)
1g: SCOP_d2xytg_ (G:)
1h: SCOP_d2xyth_ (H:)
1i: SCOP_d2xyti_ (I:)
1j: SCOP_d2xytj_ (J:)
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Class
:
All beta proteins
(24004)
Fold
:
Nicotinic receptor ligand binding domain-like
(58)
Superfamily
:
Nicotinic receptor ligand binding domain-like
(58)
Family
:
automated matches
(40)
Protein domain
:
automated matches
(40)
California sea hare (Aplysia californica) [TaxId: 6500]
(36)
1a
d2xyta_
A:
1b
d2xytb_
B:
1c
d2xytc_
C:
1d
d2xytd_
D:
1e
d2xyte_
E:
1f
d2xytf_
F:
1g
d2xytg_
G:
1h
d2xyth_
H:
1i
d2xyti_
I:
1j
d2xytj_
J:
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CATH Domains
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Pfam Domains
(1, 10)
Info
all PFAM domains
1a: PFAM_Neur_chan_LBD_2xytJ01 (J:4-205)
1b: PFAM_Neur_chan_LBD_2xytJ02 (J:4-205)
1c: PFAM_Neur_chan_LBD_2xytJ03 (J:4-205)
1d: PFAM_Neur_chan_LBD_2xytJ04 (J:4-205)
1e: PFAM_Neur_chan_LBD_2xytJ05 (J:4-205)
1f: PFAM_Neur_chan_LBD_2xytJ06 (J:4-205)
1g: PFAM_Neur_chan_LBD_2xytJ07 (J:4-205)
1h: PFAM_Neur_chan_LBD_2xytJ08 (J:4-205)
1i: PFAM_Neur_chan_LBD_2xytJ09 (J:4-205)
1j: PFAM_Neur_chan_LBD_2xytJ10 (J:4-205)
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Clan
:
no clan defined [family: Neur_chan_LBD]
(30)
Family
:
Neur_chan_LBD
(30)
Aplysia californica (California sea hare)
(19)
1a
Neur_chan_LBD-2xytJ01
J:4-205
1b
Neur_chan_LBD-2xytJ02
J:4-205
1c
Neur_chan_LBD-2xytJ03
J:4-205
1d
Neur_chan_LBD-2xytJ04
J:4-205
1e
Neur_chan_LBD-2xytJ05
J:4-205
1f
Neur_chan_LBD-2xytJ06
J:4-205
1g
Neur_chan_LBD-2xytJ07
J:4-205
1h
Neur_chan_LBD-2xytJ08
J:4-205
1i
Neur_chan_LBD-2xytJ09
J:4-205
1j
Neur_chan_LBD-2xytJ10
J:4-205
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Asymmetric Unit 1
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Asym.Unit (752 KB)
Header - Asym.Unit
Biol.Unit 1 (373 KB)
Header - Biol.Unit 1
Biol.Unit 2 (374 KB)
Header - Biol.Unit 2
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