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2XWC
Asym. Unit
Info
Asym.Unit (77 KB)
Biol.Unit 1 (139 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TP73 REFINED AT 1.8 A RESOLUTION
Authors
:
P. Canning, Y. Zhang, M. Vollmar, T. Krojer, E. Ugochukwu, J. R. C. Muniz F. Von Delft, J. Weigelt, C. H. Arrowsmith, A. M. Edwards, C. Bountra, A. N. Bullock
Date
:
03 Nov 10 (Deposition) - 17 Nov 10 (Release) - 03 Apr 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.82
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Dna-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Canning, F. Von Delft, A. N. Bullock
Structural Basis For Aspp2 Recognition By The Tumor Suppressor P73.
J. Mol. Biol. V. 423 515 2012
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: TRIS(HYDROXYETHYL)AMINOMETHANE (TAMa)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
TAM
1
Ligand/Ion
TRIS(HYDROXYETHYL)AMINOMETHANE
3
ZN
2
Ligand/Ion
ZINC ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:194 , HIS A:197 , CYS A:258 , CYS A:262
BINDING SITE FOR RESIDUE ZN A1319
2
AC2
SOFTWARE
CYS A:295 , CYS A:297 , ASP A:301 , HIS A:308
BINDING SITE FOR RESIDUE ZN A1320
3
AC3
SOFTWARE
PRO A:195 , GLU A:198
BINDING SITE FOR RESIDUE TAM A1321
4
AC4
SOFTWARE
GLU A:241 , GLN A:244 , ARG A:287 , HOH A:2175
BINDING SITE FOR RESIDUE GOL A1322
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: P53 (A:257-269)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
P53
PS00348
p53 family signature.
P73_HUMAN
257-269
1
A:257-269
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Exons
(6, 6)
Info
All Exons
Exon 1.5 (A:112-143)
Exon 1.6 (A:144-206)
Exon 1.7 (A:206-244)
Exon 1.8 (A:245-281 (gaps))
Exon 1.9 (A:281-315)
Exon 1.10 (A:316-318)
View:
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All Exon Boundaries
1: Boundary 1.3/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/1.8
5: Boundary 1.8/1.9
6: Boundary 1.9/1.10
7: Boundary 1.10/1.11
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000378295
1a
ENSE00001910421
chr1:
3569084-3569205
122
P73_HUMAN
-
0
0
-
-
1.2
ENST00000378295
2
ENSE00000868857
chr1:
3598897-3598994
98
P73_HUMAN
1-22
22
0
-
-
1.3
ENST00000378295
3
ENSE00000358575
chr1:
3599624-3599744
121
P73_HUMAN
22-62
41
0
-
-
1.5
ENST00000378295
5
ENSE00000358576
chr1:
3624113-3624355
243
P73_HUMAN
63-143
81
1
A:112-143
32
1.6
ENST00000378295
6
ENSE00000358577
chr1:
3638585-3638771
187
P73_HUMAN
144-206
63
1
A:144-206
63
1.7
ENST00000378295
7
ENSE00000734275
chr1:
3639918-3640033
116
P73_HUMAN
206-244
39
1
A:206-244
39
1.8
ENST00000378295
8
ENSE00000358579
chr1:
3643679-3643788
110
P73_HUMAN
245-281
37
1
A:245-281 (gaps)
37
1.9
ENST00000378295
9
ENSE00000734106
chr1:
3644192-3644334
143
P73_HUMAN
281-329
49
1
A:281-315
35
1.10
ENST00000378295
10
ENSE00000358581
chr1:
3644693-3644781
89
P73_HUMAN
329-358
30
1
A:316-318
3
1.11
ENST00000378295
11
ENSE00000734098
chr1:
3645891-3646012
122
P73_HUMAN
359-399
41
0
-
-
1.12
ENST00000378295
12
ENSE00000733990
chr1:
3646564-3646712
149
P73_HUMAN
399-449
51
0
-
-
1.13
ENST00000378295
13
ENSE00001801018
chr1:
3647491-3647629
139
P73_HUMAN
449-495
47
0
-
-
1.14
ENST00000378295
14
ENSE00001740893
chr1:
3648027-3648120
94
P73_HUMAN
495-526
32
0
-
-
1.15c
ENST00000378295
15c
ENSE00001834755
chr1:
3649311-3652765
3455
P73_HUMAN
527-636
110
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2xwca_ (A:)
View:
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)
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)
Class
:
All beta proteins
(24004)
Fold
:
Common fold of diphtheria toxin/transcription factors/cytochrome f
(364)
Superfamily
:
p53-like transcription factors
(153)
Family
:
p53 DNA-binding domain-like
(80)
Protein domain
:
automated matches
(46)
Human (Homo sapiens) [TaxId: 9606]
(39)
1a
d2xwca_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_P53_2xwcA01 (A:113-309)
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Clan
:
P53-like
(54)
Family
:
P53
(22)
Homo sapiens (Human)
(22)
1a
P53-2xwcA01
A:113-309
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Chain A
Asymmetric Unit 1
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Asym.Unit (77 KB)
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