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Getting 'Exon' information from database.
2XWB
Asym. Unit
Info
Asym.Unit (1.7 MB)
Biol.Unit 1 (856 KB)
Biol.Unit 2 (860 KB)
Biol.Unit 3 (859 KB)
Biol.Unit 4 (856 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF COMPLEMENT C3B IN COMPLEX WITH FACTORS B AND D
Authors
:
F. Forneris, D. Ricklin, J. Wu, A. Tzekou, R. S. Wallace, J. D. Lambris, P
Date
:
01 Nov 10 (Deposition) - 12 Jan 11 (Release) - 11 Apr 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.49
Chains
:
Asym. Unit : A,B,C,D,F,H,I,J
Biol. Unit 1: A,B,F,J (1x)
Biol. Unit 2: C,D,H,I (1x)
Biol. Unit 3: C,D,H,J (1x)
Biol. Unit 4: A,B,F,I (1x)
Keywords
:
Immune System, Pro-Convertase, Hydrolase, Serine Protease, Conformational Changes, Alternative Pathway
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Forneris, D. Ricklin, J. Wu, A. Tzekou, R. S. Wallace, J. D. Lambris, P. Gros
Structures Of C3B In Complex With Factors B And D Give Insight Into Complement Convertase Formation.
Science V. 330 1816 2010
[
close entry info
]
Hetero Components
(4, 23)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
4i: N-ACETYL-D-GLUCOSAMINE (NAGi)
4j: N-ACETYL-D-GLUCOSAMINE (NAGj)
4k: N-ACETYL-D-GLUCOSAMINE (NAGk)
4l: N-ACETYL-D-GLUCOSAMINE (NAGl)
4m: N-ACETYL-D-GLUCOSAMINE (NAGm)
4n: N-ACETYL-D-GLUCOSAMINE (NAGn)
4o: N-ACETYL-D-GLUCOSAMINE (NAGo)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
2
Ligand/Ion
BETA-D-MANNOSE
2
GOL
2
Ligand/Ion
GLYCEROL
3
MG
4
Ligand/Ion
MAGNESIUM ION
4
NAG
15
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
close Hetero Component info
]
Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:505 , ASP A:532 , VAL A:533 , ASP A:535
BINDING SITE FOR RESIDUE MG A1645
02
AC2
SOFTWARE
PRO C:505 , ASP C:532 , VAL C:533 , ASP C:535
BINDING SITE FOR RESIDUE MG C1645
03
AC3
SOFTWARE
MET D:916 , ASN D:917
BINDING SITE FOR RESIDUE NAG D2642
04
AC4
SOFTWARE
ASN B:1641 , SER F:253 , SER F:255 , THR F:328 , HOH F:2001 , HOH F:2002
BINDING SITE FOR RESIDUE MG F1742
05
AC5
SOFTWARE
TYR F:95 , ASN F:97
BINDING SITE FOR RESIDUE NAG F1743
06
AC6
SOFTWARE
ASN F:353 , ASN F:392
BINDING SITE FOR RESIDUE NAG F1747
07
AC7
SOFTWARE
ASN D:1641 , SER H:253 , SER H:255 , THR H:328 , HOH H:2001 , HOH H:2002
BINDING SITE FOR RESIDUE MG H1742
08
AC8
SOFTWARE
TYR H:95 , ASN H:97
BINDING SITE FOR RESIDUE NAG H1743
09
AC9
SOFTWARE
ASN H:353 , ASN H:392
BINDING SITE FOR RESIDUE NAG H1747
10
BC1
SOFTWARE
ASP I:116 , VAL I:117 , VAL I:148 , LEU I:149 , ARG I:151 , MET I:169 , CYS I:170
BINDING SITE FOR RESIDUE GOL I1229
11
BC2
SOFTWARE
ASP J:116 , VAL J:117 , LEU J:149 , ASP J:150 , ARG J:151 , MET J:169 , CYS J:170
BINDING SITE FOR RESIDUE GOL J1229
12
BC3
SOFTWARE
ASN A:63 , ALA A:481
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 63 RESIDUES 1643 TO 1644
13
BC4
SOFTWARE
MET B:916 , ASN B:917
BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 917 RESIDUES 2642 TO 2643
14
BC5
SOFTWARE
ASN C:63 , LEU C:479 , LYS C:480
BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 63 RESIDUES 2063 TO 2064
15
BC6
SOFTWARE
ASN F:117
BINDING SITE FOR CHAIN F OF SUGAR BOUND TO ASN F 117 RESIDUES 1117 TO 1119
16
BC7
SOFTWARE
ASN H:117
BINDING SITE FOR CHAIN H OF SUGAR BOUND TO ASN H 117 RESIDUES 1117 TO 1119
[
close Site info
]
SAPs(SNPs)/Variants
(36, 72)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_001983 (R80G, chain A/C, )
02: VAR_070941 (K133Q, chain A/C, )
03: VAR_063659 (S141P, chain F/H, )
04: VAR_063660 (R178Q, chain F/H, )
05: VAR_034866 (V188G, chain I/J, )
06: VAR_034867 (C189R, chain I/J, )
07: VAR_063661 (I217L, chain F/H, )
08: VAR_034868 (I223M, chain I/J, )
09: VAR_063221 (F261L, chain F/H, )
10: VAR_001984 (P292L, chain A/C, )
11: VAR_063222 (K298E, chain F/H, )
12: VAR_063662 (K298Q, chain F/H, )
13: VAR_063663 (M433I, chain F/H, )
14: VAR_020262 (E447D, chain A/C, )
15: VAR_063664 (K508R, chain F/H, )
16: VAR_001985 (D527N, chain A/C, )
17: VAR_016277 (K540E, chain F/H, )
18: VAR_063213 (R570Q, chain A/C, )
19: VAR_063214 (R570W, chain A/C, )
20: VAR_063654 (F581V, chain A/C, )
21: VAR_016278 (D626E, chain F/H, )
22: VAR_006495 (A711S, chain F/H, )
23: VAR_019206 (R841K, chain B/D, )
24: VAR_063655 (R1020L, chain B/D, )
25: VAR_063216 (A1072V, chain B/D, )
26: VAR_063217 (D1093N, chain B/D, )
27: VAR_063218 (C1136W, chain B/D, )
28: VAR_063219 (Q1139K, chain B/D, )
29: VAR_022761 (D1194N, chain B/D, )
30: VAR_019207 (G1202D, chain B/D, )
31: VAR_001986 (R1298Q, chain B/D, )
32: VAR_019208 (I1345T, chain B/D, )
33: VAR_063220 (H1442D, chain B/D, )
34: VAR_029792 (Q1499R, chain B/D, )
35: VAR_029793 (H1579N, chain B/D, )
36: VAR_029326 (S1597R, chain B/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_001983
R
102
G
CO3_HUMAN
Polymorphism
2230199
A/C
R
80
G
02
UniProt
VAR_070941
K
155
Q
CO3_HUMAN
Disease (ARMD9)
---
A/C
K
133
Q
03
UniProt
VAR_063659
S
166
P
CFAB_HUMAN
Disease (AHUS4)
---
F/H
S
141
P
04
UniProt
VAR_063660
R
203
Q
CFAB_HUMAN
Disease (AHUS4)
---
F/H
R
178
Q
05
UniProt
VAR_034866
V
213
G
CFAD_HUMAN
Disease (CFDD)
---
I/J
V
188
G
06
UniProt
VAR_034867
C
214
R
CFAD_HUMAN
Disease (CFDD)
---
I/J
C
189
R
07
UniProt
VAR_063661
I
242
L
CFAB_HUMAN
Disease (AHUS4)
---
F/H
I
217
L
08
UniProt
VAR_034868
I
248
M
CFAD_HUMAN
Polymorphism
2230216
I/J
I
223
M
09
UniProt
VAR_063221
F
286
L
CFAB_HUMAN
Disease (AHUS4)
---
F/H
F
261
L
10
UniProt
VAR_001984
P
314
L
CO3_HUMAN
Polymorphism
1047286
A/C
P
292
L
11
UniProt
VAR_063222
K
323
E
CFAB_HUMAN
Disease (AHUS4)
---
F/H
K
298
E
12
UniProt
VAR_063662
K
323
Q
CFAB_HUMAN
Disease (AHUS4)
---
F/H
K
298
Q
13
UniProt
VAR_063663
M
458
I
CFAB_HUMAN
Disease (AHUS4)
---
F/H
M
433
I
14
UniProt
VAR_020262
E
469
D
CO3_HUMAN
Polymorphism
11569422
A/C
E
447
D
15
UniProt
VAR_063664
K
533
R
CFAB_HUMAN
Disease (AHUS4)
---
F/H
K
508
R
16
UniProt
VAR_001985
D
549
N
CO3_HUMAN
Disease (C3D)
---
A/C
D
527
N
17
UniProt
VAR_016277
K
565
E
CFAB_HUMAN
Polymorphism
4151659
F/H
K
540
E
18
UniProt
VAR_063213
R
592
Q
CO3_HUMAN
Disease (AHUS5)
---
A/C
R
570
Q
19
UniProt
VAR_063214
R
592
W
CO3_HUMAN
Disease (AHUS5)
---
A/C
R
570
W
20
UniProt
VAR_063654
F
603
V
CO3_HUMAN
Disease (AHUS5)
---
A/C
F
581
V
21
UniProt
VAR_016278
D
651
E
CFAB_HUMAN
Polymorphism
4151660
F/H
D
626
E
22
UniProt
VAR_006495
A
736
S
CFAB_HUMAN
Polymorphism
---
F/H
A
711
S
23
UniProt
VAR_019206
R
863
K
CO3_HUMAN
Polymorphism
11569472
B/D
R
841
K
24
UniProt
VAR_063655
R
1042
L
CO3_HUMAN
Disease (AHUS5)
---
B/D
R
1020
L
25
UniProt
VAR_063216
A
1094
V
CO3_HUMAN
Disease (AHUS5)
---
B/D
A
1072
V
26
UniProt
VAR_063217
D
1115
N
CO3_HUMAN
Disease (AHUS5)
---
B/D
D
1093
N
27
UniProt
VAR_063218
C
1158
W
CO3_HUMAN
Disease (AHUS5)
---
B/D
C
1136
W
28
UniProt
VAR_063219
Q
1161
K
CO3_HUMAN
Disease (AHUS5)
---
B/D
Q
1139
K
29
UniProt
VAR_022761
D
1216
N
CO3_HUMAN
Unclassified
---
B/D
D
1194
N
30
UniProt
VAR_019207
G
1224
D
CO3_HUMAN
Polymorphism
11569534
B/D
G
1202
D
31
UniProt
VAR_001986
R
1320
Q
CO3_HUMAN
Disease (C3D)
---
B/D
R
1298
Q
32
UniProt
VAR_019208
I
1367
T
CO3_HUMAN
Polymorphism
11569541
B/D
I
1345
T
33
UniProt
VAR_063220
H
1464
D
CO3_HUMAN
Disease (AHUS5)
---
B/D
H
1442
D
34
UniProt
VAR_029792
Q
1521
R
CO3_HUMAN
Polymorphism
7256789
B/D
Q
1499
R
35
UniProt
VAR_029793
H
1601
N
CO3_HUMAN
Polymorphism
1803225
B/D
H
1579
N
36
UniProt
VAR_029326
S
1619
R
CO3_HUMAN
Polymorphism
2230210
B/D
S
1597
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(7, 24)
Info
All PROSITE Patterns/Profiles
1: TRYPSIN_DOM (I:1-228,J:1-228,F:452-732,H:452-73...)
2: SUSHI (F:10-75,H:10-75|F:76-135,H:76-135|...)
3: TRYPSIN_HIS (I:37-42,J:37-42,F:497-502,H:497-50...)
4: TRYPSIN_SER (I:177-188,J:177-188,F:668-679,H:66...)
5: VWFA (F:245-444,H:245-444)
6: ALPHA_2_MACROGLOBULIN (B:985-993,D:985-993)
7: NTR (B:1496-1639,D:1496-1639)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TRYPSIN_DOM
PS50240
Serine proteases, trypsin domain profile.
CFAD_HUMAN
26-253
2
I:1-228
J:1-228
CFAB_HUMAN
477-757
2
F:452-732
H:452-732
2
SUSHI
PS50923
Sushi/CCP/SCR domain profile.
CFAB_HUMAN
35-100
101-160
163-220
6
F:10-75
H:10-75
F:76-135
H:76-135
F:138-195
H:138-195
3
TRYPSIN_HIS
PS00134
Serine proteases, trypsin family, histidine active site.
CFAD_HUMAN
62-67
2
I:37-42
J:37-42
CFAB_HUMAN
522-527
2
F:497-502
H:497-502
4
TRYPSIN_SER
PS00135
Serine proteases, trypsin family, serine active site.
CFAD_HUMAN
202-213
2
I:177-188
J:177-188
CFAB_HUMAN
693-704
2
F:668-679
H:668-679
5
VWFA
PS50234
VWFA domain profile.
CFAB_HUMAN
270-469
2
F:245-444
H:245-444
6
ALPHA_2_MACROGLOBULIN
PS00477
Alpha-2-macroglobulin family thiolester region signature.
CO3_HUMAN
1007-1015
2
B:985-993
D:985-993
7
NTR
PS50189
NTR domain profile.
CO3_HUMAN
1518-1661
2
B:1496-1639
D:1496-1639
[
close PROSITE info
]
Exons
(44, 88)
Info
All Exons
Exon 1.3a (A:1-3 | - | C:1-3 | -)
Exon 1.4 (A:3-67 | - | C:3-67 | -)
Exon 1.5 (A:68-123 (gaps) | - | C:68-123 (ga...)
Exon 1.6a (A:123-146 | - | C:123-146 | -)
Exon 1.7 (A:147-178 | - | C:147-178 | -)
Exon 1.8b (A:178-206 | - | C:178-206 | -)
Exon 1.9 (A:206-236 | - | C:206-236 | -)
Exon 1.11 (A:236-270 | - | C:236-270 | -)
Exon 1.12b (A:271-313 | - | C:271-313 | -)
Exon 1.13 (A:313-351 | - | C:313-351 | -)
Exon 1.14b (A:352-401 | - | C:352-401 | -)
Exon 1.15 (A:402-471 | - | C:402-471 | -)
Exon 1.16b (A:472-540 | - | C:472-540 | -)
Exon 1.17b (A:541-593 | - | C:541-593 | -)
Exon 1.18 (A:594-637 | - | C:594-637 | -)
Exon 1.19 (A:637-642 | - | C:637-642 | -)
Exon 1.21c (- | B:730-763 | - | D:730-763)
Exon 1.22 (- | B:763-792 | - | D:763-792)
Exon 1.23b (- | B:792-839 | - | D:792-839)
Exon 1.23d (- | B:840-910 | - | D:840-910)
Exon 1.24b (- | B:911-933 | - | D:911-933)
Exon 1.25 (- | B:933-962 | - | D:933-962)
Exon 1.26 (- | B:962-1030 | - | D:962-1030)
Exon 1.27 (- | B:1030-1055 | - | D:1030-1055)
Exon 1.28c (- | B:1055-1108 | - | D:1055-1108)
Exon 1.29 (- | B:1109-1141 | - | D:1109-1141)
Exon 1.31a (- | B:1142-1194 | - | D:1142-1194)
Exon 1.31d (- | B:1194-1248 | - | D:1194-1248)
Exon 1.32 (- | B:1249-1301 | - | D:1249-1301)
Exon 1.33 (- | B:1302-1321 | - | D:1302-1321)
Exon 1.34a (- | B:1322-1349 | - | D:1322-1349)
Exon 1.35a (- | B:1359-1369 | - | D:1359-1369)
Exon 1.36b (- | B:1369-1398 | - | D:1369-1398)
Exon 1.37 (- | B:1399-1428 | - | D:1399-1428)
Exon 1.38 (- | B:1429-1464 | - | D:1429-1464)
Exon 1.40a (- | B:1464-1494 | - | D:1464-1494)
Exon 1.41a (- | B:1494-1522 (gaps) | - | D:149...)
Exon 1.42 (- | B:1522-1550 | - | D:1522-1550)
Exon 1.43 (- | B:1550-1595 | - | D:1550-1595)
Exon 1.44c (- | B:1595-1641 | - | D:1595-1641)
Exon 2.2 (I:1-46 | J:1-46)
Exon 2.3 (I:46-94 | J:46-94)
Exon 2.4 (I:95-180 | J:95-180)
Exon 2.5 (I:181-228 | J:181-228)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.3a
02: Boundary 1.3a/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6a
05: Boundary 1.6a/1.7
06: Boundary 1.7/1.8b
07: Boundary 1.8b/1.9
08: Boundary 1.9/1.11
09: Boundary 1.11/1.12b
10: Boundary 1.12b/1.13
11: Boundary 1.13/1.14b
12: Boundary 1.14b/1.15
13: Boundary 1.15/1.16b
14: Boundary 1.16b/1.17b
15: Boundary 1.17b/1.18
16: Boundary 1.18/1.19
17: Boundary 1.19/1.20
18: Boundary 1.20/1.21c
19: Boundary 1.21c/1.22
20: Boundary 1.22/1.23b
21: Boundary 1.23b/1.23d
22: Boundary 1.23d/1.24b
23: Boundary 1.24b/1.25
24: Boundary 1.25/1.26
25: Boundary 1.26/1.27
26: Boundary 1.27/1.28c
27: Boundary 1.28c/1.29
28: Boundary 1.29/1.31a
29: Boundary 1.31a/1.31d
30: Boundary 1.31d/1.32
31: Boundary 1.32/1.33
32: Boundary 1.33/1.34a
33: Boundary 1.34a/1.35a
34: Boundary 1.35a/1.36b
35: Boundary 1.36b/1.37
36: Boundary 1.37/1.38
37: Boundary 1.38/1.40a
38: Boundary 1.40a/1.41a
39: Boundary 1.41a/1.42
40: Boundary 1.42/1.43
41: Boundary 1.43/1.44c
42: Boundary 1.44c/-
43: Boundary 2.1/2.2
44: Boundary 2.2/2.3
45: Boundary 2.3/2.4
46: Boundary 2.4/2.5
47: Boundary 2.5/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3a
ENST00000245907
3a
ENSE00001938285
chr19:
6720693-6720527
167
CO3_HUMAN
1-25
25
2
A:1-3
-
C:1-3
-
3
-
3
-
1.4
ENST00000245907
4
ENSE00001053574
chr19:
6719414-6719222
193
CO3_HUMAN
25-89
65
2
A:3-67
-
C:3-67
-
65
-
65
-
1.5
ENST00000245907
5
ENSE00000858140
chr19:
6718423-6718258
166
CO3_HUMAN
90-145
56
2
A:68-123 (gaps)
-
C:68-123 (gaps)
-
56
-
56
-
1.6a
ENST00000245907
6a
ENSE00001053592
chr19:
6718175-6718105
71
CO3_HUMAN
145-168
24
2
A:123-146
-
C:123-146
-
24
-
24
-
1.7
ENST00000245907
7
ENSE00000858137
chr19:
6714457-6714363
95
CO3_HUMAN
169-200
32
2
A:147-178
-
C:147-178
-
32
-
32
-
1.8b
ENST00000245907
8b
ENSE00001053577
chr19:
6714259-6714177
83
CO3_HUMAN
200-228
29
2
A:178-206
-
C:178-206
-
29
-
29
-
1.9
ENST00000245907
9
ENSE00001053565
chr19:
6714093-6714003
91
CO3_HUMAN
228-258
31
2
A:206-236
-
C:206-236
-
31
-
31
-
1.11
ENST00000245907
11
ENSE00001053527
chr19:
6713520-6713418
103
CO3_HUMAN
258-292
35
2
A:236-270
-
C:236-270
-
35
-
35
-
1.12b
ENST00000245907
12b
ENSE00000858133
chr19:
6713326-6713200
127
CO3_HUMAN
293-335
43
2
A:271-313
-
C:271-313
-
43
-
43
-
1.13
ENST00000245907
13
ENSE00001053519
chr19:
6712634-6712519
116
CO3_HUMAN
335-373
39
2
A:313-351
-
C:313-351
-
39
-
39
-
1.14b
ENST00000245907
14b
ENSE00001053582
chr19:
6712417-6712268
150
CO3_HUMAN
374-423
50
2
A:352-401
-
C:352-401
-
50
-
50
-
1.15
ENST00000245907
15
ENSE00000858130
chr19:
6711207-6710998
210
CO3_HUMAN
424-493
70
2
A:402-471
-
C:402-471
-
70
-
70
-
1.16b
ENST00000245907
16b
ENSE00001159750
chr19:
6710856-6710650
207
CO3_HUMAN
494-562
69
2
A:472-540
-
C:472-540
-
69
-
69
-
1.17b
ENST00000245907
17b
ENSE00000858128
chr19:
6709853-6709695
159
CO3_HUMAN
563-615
53
2
A:541-593
-
C:541-593
-
53
-
53
-
1.18
ENST00000245907
18
ENSE00000858127
chr19:
6707940-6707811
130
CO3_HUMAN
616-659
44
2
A:594-637
-
C:594-637
-
44
-
44
-
1.19
ENST00000245907
19
ENSE00001053520
chr19:
6707548-6707477
72
CO3_HUMAN
659-683
25
2
A:637-642
-
C:637-642
-
6
-
6
-
1.20
ENST00000245907
20
ENSE00001053532
chr19:
6707284-6707087
198
CO3_HUMAN
683-749
67
0
-
-
1.21c
ENST00000245907
21c
ENSE00001053537
chr19:
6702590-6702482
109
CO3_HUMAN
749-785
37
2
-
B:730-763
-
D:730-763
-
34
-
34
1.22
ENST00000245907
22
ENSE00001053579
chr19:
6702223-6702138
86
CO3_HUMAN
785-814
30
2
-
B:763-792
-
D:763-792
-
30
-
30
1.23b
ENST00000245907
23b
ENSE00001053525
chr19:
6697805-6697663
143
CO3_HUMAN
814-861
48
2
-
B:792-839
-
D:792-839
-
48
-
48
1.23d
ENST00000245907
23d
ENSE00000858122
chr19:
6697567-6697355
213
CO3_HUMAN
862-932
71
2
-
B:840-910
-
D:840-910
-
71
-
71
1.24b
ENST00000245907
24b
ENSE00000858121
chr19:
6696670-6696604
67
CO3_HUMAN
933-955
23
2
-
B:911-933
-
D:911-933
-
23
-
23
1.25
ENST00000245907
25
ENSE00001053553
chr19:
6696476-6696390
87
CO3_HUMAN
955-984
30
2
-
B:933-962
-
D:933-962
-
30
-
30
1.26
ENST00000245907
26
ENSE00000858119
chr19:
6694645-6694442
204
CO3_HUMAN
984-1052
69
2
-
B:962-1030
-
D:962-1030
-
69
-
69
1.27
ENST00000245907
27
ENSE00000858118
chr19:
6693498-6693423
76
CO3_HUMAN
1052-1077
26
2
-
B:1030-1055
-
D:1030-1055
-
26
-
26
1.28c
ENST00000245907
28c
ENSE00000858117
chr19:
6693094-6692935
160
CO3_HUMAN
1077-1130
54
2
-
B:1055-1108
-
D:1055-1108
-
54
-
54
1.29
ENST00000245907
29
ENSE00000858116
chr19:
6690738-6690640
99
CO3_HUMAN
1131-1163
33
2
-
B:1109-1141
-
D:1109-1141
-
33
-
33
1.31a
ENST00000245907
31a
ENSE00000858115
chr19:
6686913-6686757
157
CO3_HUMAN
1164-1216
53
2
-
B:1142-1194
-
D:1142-1194
-
53
-
53
1.31d
ENST00000245907
31d
ENSE00001504968
chr19:
6686298-6686135
164
CO3_HUMAN
1216-1270
55
2
-
B:1194-1248
-
D:1194-1248
-
55
-
55
1.32
ENST00000245907
32
ENSE00001159688
chr19:
6685157-6684999
159
CO3_HUMAN
1271-1323
53
2
-
B:1249-1301
-
D:1249-1301
-
53
-
53
1.33
ENST00000245907
33
ENSE00000858111
chr19:
6684845-6684786
60
CO3_HUMAN
1324-1343
20
2
-
B:1302-1321
-
D:1302-1321
-
20
-
20
1.34a
ENST00000245907
34a
ENSE00001053551
chr19:
6684661-6684571
91
CO3_HUMAN
1344-1374
31
2
-
B:1322-1349
-
D:1322-1349
-
28
-
28
1.35a
ENST00000245907
35a
ENSE00000858109
chr19:
6684450-6684399
52
CO3_HUMAN
1374-1391
18
2
-
B:1359-1369
-
D:1359-1369
-
11
-
11
1.36b
ENST00000245907
36b
ENSE00000858108
chr19:
6682240-6682153
88
CO3_HUMAN
1391-1420
30
2
-
B:1369-1398
-
D:1369-1398
-
30
-
30
1.37
ENST00000245907
37
ENSE00000858107
chr19:
6682041-6681952
90
CO3_HUMAN
1421-1450
30
2
-
B:1399-1428
-
D:1399-1428
-
30
-
30
1.38
ENST00000245907
38
ENSE00000858106
chr19:
6680274-6680169
106
CO3_HUMAN
1451-1486
36
2
-
B:1429-1464
-
D:1429-1464
-
36
-
36
1.40a
ENST00000245907
40a
ENSE00000858105
chr19:
6679507-6679418
90
CO3_HUMAN
1486-1516
31
2
-
B:1464-1494
-
D:1464-1494
-
31
-
31
1.41a
ENST00000245907
41a
ENSE00000858104
chr19:
6679219-6679136
84
CO3_HUMAN
1516-1544
29
2
-
B:1494-1522 (gaps)
-
D:1494-1522 (gaps)
-
29
-
29
1.42
ENST00000245907
42
ENSE00000858103
chr19:
6678466-6678383
84
CO3_HUMAN
1544-1572
29
2
-
B:1522-1550
-
D:1522-1550
-
29
-
29
1.43
ENST00000245907
43
ENSE00000858102
chr19:
6678298-6678163
136
CO3_HUMAN
1572-1617
46
2
-
B:1550-1595
-
D:1550-1595
-
46
-
46
1.44c
ENST00000245907
44c
ENSE00001159829
chr19:
6678034-6677846
189
CO3_HUMAN
1617-1663
47
2
-
B:1595-1641
-
D:1595-1641
-
47
-
47
2.1
ENST00000327726
1
ENSE00001231576
chr19:
859665-859744
80
CFAD_HUMAN
1-19
19
0
-
-
2.2
ENST00000327726
2
ENSE00001231561
chr19:
860617-860773
157
CFAD_HUMAN
19-71
53
2
I:1-46
J:1-46
46
46
2.3
ENST00000327726
3
ENSE00001231555
chr19:
860861-861005
145
CFAD_HUMAN
71-119
49
2
I:46-94
J:46-94
49
49
2.4
ENST00000327726
4
ENSE00001374327
chr19:
861699-861956
258
CFAD_HUMAN
120-205
86
2
I:95-180
J:95-180
86
86
2.5
ENST00000327726
5
ENSE00001354943
chr19:
863092-863606
515
CFAD_HUMAN
206-253
48
2
I:181-228
J:181-228
48
48
[
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]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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Pfam Domains
(10, 26)
Info
all PFAM domains
01a: PFAM_A2M_comp_2xwbD01 (D:1029-1262)
01b: PFAM_A2M_comp_2xwbD02 (D:1029-1262)
02a: PFAM_A2M_N_2xwbC01 (C:107-202)
02b: PFAM_A2M_N_2xwbC02 (C:107-202)
03a: PFAM_A2M_2xwbD03 (D:748-844)
03b: PFAM_A2M_2xwbD04 (D:748-844)
04a: PFAM_Trypsin_2xwbH01 (H:456-727)
04b: PFAM_Trypsin_2xwbH02 (H:456-727)
04c: PFAM_Trypsin_2xwbJ01 (J:1-223)
04d: PFAM_Trypsin_2xwbJ02 (J:1-223)
05a: PFAM_NTR_2xwbD05 (D:1512-1622)
05b: PFAM_NTR_2xwbD06 (D:1512-1622)
06a: PFAM_A2M_N_2_2xwbC03 (C:434-583)
06b: PFAM_A2M_N_2_2xwbC04 (C:434-583)
07a: PFAM_A2M_recep_2xwbD07 (D:1376-1471)
07b: PFAM_A2M_recep_2xwbD08 (D:1376-1471)
08a: PFAM_Sushi_2xwbH03 (H:140-193)
08b: PFAM_Sushi_2xwbH04 (H:140-193)
08c: PFAM_Sushi_2xwbH05 (H:140-193)
08d: PFAM_Sushi_2xwbH06 (H:140-193)
08e: PFAM_Sushi_2xwbH07 (H:140-193)
08f: PFAM_Sushi_2xwbH08 (H:140-193)
09a: PFAM_Thiol_ester_cl_2xwbD09 (D:977-1007)
09b: PFAM_Thiol_ester_cl_2xwbD10 (D:977-1007)
10a: PFAM_VWA_2xwbH09 (H:245-443)
10b: PFAM_VWA_2xwbH10 (H:245-443)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
6_Hairpin
(120)
Family
:
A2M_comp
(16)
Homo sapiens (Human)
(13)
01a
A2M_comp-2xwbD01
D:1029-1262
01b
A2M_comp-2xwbD02
D:1029-1262
Clan
:
E-set
(290)
Family
:
A2M_N
(14)
Homo sapiens (Human)
(13)
02a
A2M_N-2xwbC01
C:107-202
02b
A2M_N-2xwbC02
C:107-202
Clan
:
Ig
(577)
Family
:
A2M
(13)
Homo sapiens (Human)
(12)
03a
A2M-2xwbD03
D:748-844
03b
A2M-2xwbD04
D:748-844
Clan
:
Peptidase_PA
(797)
Family
:
Trypsin
(679)
Homo sapiens (Human)
(339)
04a
Trypsin-2xwbH01
H:456-727
04b
Trypsin-2xwbH02
H:456-727
04c
Trypsin-2xwbJ01
J:1-223
04d
Trypsin-2xwbJ02
J:1-223
Clan
:
TIMP-like
(15)
Family
:
NTR
(13)
Homo sapiens (Human)
(13)
05a
NTR-2xwbD05
D:1512-1622
05b
NTR-2xwbD06
D:1512-1622
Clan
:
no clan defined [family: A2M_N_2]
(13)
Family
:
A2M_N_2
(13)
Homo sapiens (Human)
(12)
06a
A2M_N_2-2xwbC03
C:434-583
06b
A2M_N_2-2xwbC04
C:434-583
Clan
:
no clan defined [family: A2M_recep]
(13)
Family
:
A2M_recep
(13)
Homo sapiens (Human)
(12)
07a
A2M_recep-2xwbD07
D:1376-1471
07b
A2M_recep-2xwbD08
D:1376-1471
Clan
:
no clan defined [family: Sushi]
(50)
Family
:
Sushi
(50)
Homo sapiens (Human)
(42)
08a
Sushi-2xwbH03
H:140-193
08b
Sushi-2xwbH04
H:140-193
08c
Sushi-2xwbH05
H:140-193
08d
Sushi-2xwbH06
H:140-193
08e
Sushi-2xwbH07
H:140-193
08f
Sushi-2xwbH08
H:140-193
Clan
:
no clan defined [family: Thiol-ester_cl]
(12)
Family
:
Thiol-ester_cl
(12)
Homo sapiens (Human)
(9)
09a
Thiol-ester_cl-2xwbD09
D:977-1007
09b
Thiol-ester_cl-2xwbD10
D:977-1007
Clan
:
vWA-like
(60)
Family
:
VWA
(50)
Homo sapiens (Human)
(47)
10a
VWA-2xwbH09
H:245-443
10b
VWA-2xwbH10
H:245-443
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