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Biol. Unit 1
Info
Asym.Unit (103 KB)
Biol.Unit 1 (191 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF APOLACCASE FROM THERMUS THERMOPHILUS HB27
Authors
:
H. Serrano-Posada, B. Valderrama, E. Rudino-Pinera
Date
:
21 Oct 10 (Deposition) - 26 Oct 11 (Release) - 16 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Oxidoreductase, Multicopper Oxidases
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Serrano-Posada, S. Centeno-Leija, S. P. Rojas-Trejo, C. Rodriguez-Almazan, V. Stojanoff, E. Rudino-Pinera
X-Ray-Induced Catalytic Active-Site Reduction Of A Multicopper Oxidase: Structural Insights Into The Proton- Relay Mechanism And O2-Reduction States.
Acta Crystallogr. , Sect. D V. 71 2396 2015
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Hetero Components
(2, 32)
Info
All Hetero Components
1a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
1b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
1c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
1d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
1e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
1f: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDf)
1g: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDg)
1h: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDh)
1i: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDi)
2a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
2b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
2c: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDc)
2d: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDd)
2e: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDe)
2f: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDf)
2g: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDg)
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No.
Name
Count
Type
Full Name
1
MPD
18
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
2
MRD
14
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:247 , ASP A:248 , LEU A:263 , GLU A:267 , ARG A:268 , TYR A:414 , LYS A:418 , MPD A:1470
BINDING SITE FOR RESIDUE MPD A1463
02
AC2
SOFTWARE
GLN A:56 , LEU A:339 , HOH A:2516 , HOH A:2517
BINDING SITE FOR RESIDUE MRD A1464
03
AC3
SOFTWARE
LYS A:104 , ARG A:280 , TYR A:317 , HOH A:2376 , HOH A:2513 , HOH A:2514
BINDING SITE FOR RESIDUE MPD A1465
04
AC4
SOFTWARE
PRO A:191 , MET A:295 , MET A:355 , MRD A:1473
BINDING SITE FOR RESIDUE MRD A1466
05
AC5
SOFTWARE
PRO A:342 , VAL A:343 , THR A:345
BINDING SITE FOR RESIDUE MPD A1467
06
AC6
SOFTWARE
PRO A:25 , SER A:26 , GLN A:216 , ASN A:362 , GLN A:364 , HOH A:2005 , HOH A:2007 , HOH A:2519 , HOH A:2520
BINDING SITE FOR RESIDUE MRD A1468
07
AC7
SOFTWARE
GLY A:140 , TRP A:194 , ARG A:453 , MPD A:1474
BINDING SITE FOR RESIDUE MRD A1469
08
AC8
SOFTWARE
LEU A:256 , GLU A:260 , LEU A:261 , PRO A:413 , MPD A:1463 , HOH A:2331 , HOH A:2521
BINDING SITE FOR RESIDUE MPD A1470
09
AC9
SOFTWARE
GLU A:127 , LEU A:128 , SER A:158 , SER A:334 , HOH A:2198 , HOH A:2394 , HOH A:2522
BINDING SITE FOR RESIDUE MPD A1471
10
BC1
SOFTWARE
LYS A:31 , GLY A:64 , HOH A:2523
BINDING SITE FOR RESIDUE MPD A1472
11
BC2
SOFTWARE
PRO A:191 , TRP A:194 , MET A:355 , ALA A:356 , ARG A:453 , MRD A:1466
BINDING SITE FOR RESIDUE MRD A1473
12
BC3
SOFTWARE
PRO A:144 , PRO A:188 , HIS A:189 , TRP A:194 , MRD A:1469 , HOH A:2210 , HOH A:2253
BINDING SITE FOR RESIDUE MPD A1474
13
BC4
SOFTWARE
PHE A:122 , THR A:123 , ARG A:311 , MPD A:1478 , HOH A:2146 , HOH A:2500 , HOH A:2525
BINDING SITE FOR RESIDUE MPD A1475
14
BC5
SOFTWARE
PRO A:108 , PHE A:109 , HIS A:137 , LEU A:138 , HIS A:139 , PHE A:366 , HIS A:368 , MET A:456 , HOH A:2207
BINDING SITE FOR RESIDUE MRD A1476
15
BC6
SOFTWARE
GLU A:257 , ARG A:276 , HOH A:2308 , HOH A:2324 , HOH A:2340
BINDING SITE FOR RESIDUE MRD A1477
16
BC7
SOFTWARE
SER A:102 , TYR A:317 , GLU A:437 , MPD A:1475 , HOH A:2146 , HOH A:2180 , HOH A:2374 , HOH A:2377 , HOH A:2500
BINDING SITE FOR RESIDUE MPD A1478
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SAPs(SNPs)/Variants
(0, 0)
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