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2XU1
Biol. Unit 4
Info
Asym.Unit (159 KB)
Biol.Unit 1 (41 KB)
Biol.Unit 2 (43 KB)
Biol.Unit 3 (40 KB)
Biol.Unit 4 (40 KB)
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(1)
Title
:
CATHEPSIN L WITH A NITRILE INHIBITOR
Authors
:
D. W. Banner, J. M. Benz, S. Steinbacher, W. Haap
Date
:
14 Oct 10 (Deposition) - 12 Jan 11 (Release) - 12 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Hydrolase, Drug Design, Thiol Protease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. A. Hardegger, B. Kuhn, B. Spinnler, L. Anselm, R. Ecabert, M. Stihle B. Gsell, R. Thoma, J. Diez, J. Benz, J. M. Plancher, G. Hartmann, D. W. Banner, W. Haap, F. Diederich
Systematic Investigation Of Halogen Bonding In Protein-Ligand Interactions.
Angew. Chem. Int. Ed. Engl. V. 50 314 2011
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: (2S,4R)-1-[1-(4-CHLOROPHENYL)CYCLO... (424a)
1b: (2S,4R)-1-[1-(4-CHLOROPHENYL)CYCLO... (424b)
1c: (2S,4R)-1-[1-(4-CHLOROPHENYL)CYCLO... (424c)
1d: (2S,4R)-1-[1-(4-CHLOROPHENYL)CYCLO... (424d)
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No.
Name
Count
Type
Full Name
1
424
1
Ligand/Ion
(2S,4R)-1-[1-(4-CHLOROPHENYL)CYCLOPROPYL]CARBONYL-4-(2-CHLOROPHENYL)SULFONYL-N-[1-(IMINOMETHYL)CYCLOPROPYL]PYRROLIDINE-2-CARBOXAMIDE
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Sites
(1, 1)
Info
All Sites
1: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
GLN D:19 , GLY D:23 , SER D:24 , CYS D:25 , TRP D:26 , GLY D:61 , GLY D:67 , GLY D:68 , LEU D:69 , MET D:70 , ALA D:135 , MET D:161 , ASP D:162 , HIS D:163 , GLY D:164 , ALA D:214
BINDING SITE FOR RESIDUE 424 D1221
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: THIOL_PROTEASE_CYS (D:19-30)
2: THIOL_PROTEASE_HIS (D:161-171)
3: THIOL_PROTEASE_ASN (D:182-201)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOL_PROTEASE_CYS
PS00139
Eukaryotic thiol (cysteine) proteases cysteine active site.
CATL1_HUMAN
132-143
1
-
-
-
D:19-30
2
THIOL_PROTEASE_HIS
PS00639
Eukaryotic thiol (cysteine) proteases histidine active site.
CATL1_HUMAN
274-284
1
-
-
-
D:161-171
3
THIOL_PROTEASE_ASN
PS00640
Eukaryotic thiol (cysteine) proteases asparagine active site.
CATL1_HUMAN
295-314
1
-
-
-
D:182-201
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Exons
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Peptidase_C1_2xu1D01 (D:1-219)
1b: PFAM_Peptidase_C1_2xu1D02 (D:1-219)
1c: PFAM_Peptidase_C1_2xu1D03 (D:1-219)
1d: PFAM_Peptidase_C1_2xu1D04 (D:1-219)
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Clan
:
Peptidase_CA
(169)
Family
:
Peptidase_C1
(81)
Homo sapiens (Human)
(45)
1a
Peptidase_C1-2xu1D01
D:1-219
1b
Peptidase_C1-2xu1D02
D:1-219
1c
Peptidase_C1-2xu1D03
D:1-219
1d
Peptidase_C1-2xu1D04
D:1-219
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Chain D
Asymmetric Unit 1
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Asym.Unit (159 KB)
Header - Asym.Unit
Biol.Unit 1 (41 KB)
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Biol.Unit 2 (43 KB)
Header - Biol.Unit 2
Biol.Unit 3 (40 KB)
Header - Biol.Unit 3
Biol.Unit 4 (40 KB)
Header - Biol.Unit 4
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