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Asym. Unit
Info
Asym.Unit (52 KB)
Biol.Unit 1 (48 KB)
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(1)
Title
:
STRUCTURE OF THE N-TERMINAL FOUR DOMAINS OF THE COMPLEMENT REGULATOR RAT CRRY
Authors
:
K. J. Leath, P. Roversi, S. Johnson, B. P. Morgan, S. M. Lea
Date
:
13 Sep 10 (Deposition) - 22 Jun 11 (Release) - 19 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Immune System, Immunology
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Roversi, S. Johnson, J. J. E. Caesar, F. Mclean, K. J. Leath, S. A. Tsiftsoglou, B. P. Morgan, C. L. Harris, R. B. Sim, S. M. Lea
Structures Of The Rat Complement Regulator Crry.
Acta Crystallogr. , Sect. F V. 67 739 2011
[
close entry info
]
Hetero Components
(2, 16)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
13
Ligand/Ion
1,2-ETHANEDIOL
2
SO4
3
Ligand/Ion
SULFATE ION
[
close Hetero Component info
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:101 , ARG A:254 , ARG A:276 , SER A:277 , HOH A:2118
BINDING SITE FOR RESIDUE SO4 A1000
02
AC2
SOFTWARE
ARG A:69 , PRO A:70 , ARG A:75 , SER A:78 , HOH A:2006
BINDING SITE FOR RESIDUE SO4 A1001
03
AC3
SOFTWARE
PRO A:236 , HIS A:237 , VAL A:238 , ALA A:241 , ILE A:243 , PHE A:259 , HOH A:2100
BINDING SITE FOR RESIDUE SO4 A1002
04
AC4
SOFTWARE
LYS A:198 , PHE A:200 , ASN A:201 , LEU A:202 , HOH A:2079
BINDING SITE FOR RESIDUE EDO A3001
05
AC5
SOFTWARE
PRO A:105 , GLN A:106 , PRO A:154 , ILE A:155 , CYS A:156 , TYR A:274 , HOH A:2057 , HOH A:2120
BINDING SITE FOR RESIDUE EDO A3002
06
AC6
SOFTWARE
ILE A:73 , ARG A:75 , VAL A:93 , CYS A:94 , ILE A:95
BINDING SITE FOR RESIDUE EDO A3003
07
AC7
SOFTWARE
THR A:234 , ASN A:279 , TRP A:281 , HOH A:2122
BINDING SITE FOR RESIDUE EDO A3004
08
AC8
SOFTWARE
TYR A:124 , TRP A:149 , ALA A:151 , GLU A:152 , ALA A:153
BINDING SITE FOR RESIDUE EDO A3005
09
AC9
SOFTWARE
TYR A:72 , GLN A:91 , ARG A:96 , GLY A:119
BINDING SITE FOR RESIDUE EDO A3006
10
BC1
SOFTWARE
VAL A:238 , GLU A:239 , LYS A:246 , ASN A:247 , HOH A:2123
BINDING SITE FOR RESIDUE EDO A3007
11
BC2
SOFTWARE
PRO A:102 , VAL A:112 , ILE A:133 , GLY A:134
BINDING SITE FOR RESIDUE EDO A3008
12
BC3
SOFTWARE
MET A:139 , ASP A:150 , HOH A:2124
BINDING SITE FOR RESIDUE EDO A3009
13
BC4
SOFTWARE
GLN A:98 , ASP A:150
BINDING SITE FOR RESIDUE EDO A3010
14
BC5
SOFTWARE
ILE A:109 , VAL A:110 , HIS A:111 , VAL A:112 , GLN A:216
BINDING SITE FOR RESIDUE EDO A3011
15
BC6
SOFTWARE
ASP A:104 , GLU A:282 , GLN A:284
BINDING SITE FOR RESIDUE EDO A3012
16
BC7
SOFTWARE
ARG A:276 , ARG A:280 , TRP A:281 , GLN A:284 , HOH A:2112
BINDING SITE FOR RESIDUE EDO A3014
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: SUSHI (-|A:97-158|A:159-229|A:231-288|-|-...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SUSHI
PS50923
Sushi/CCP/SCR domain profile.
CR1L_RAT
36-96
97-158
159-229
231-290
292-354
355-415
417-477
3
-
A:97-158
A:159-229
A:231-288
-
-
-
[
close PROSITE info
]
Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:37-96)
Exon 1.3 (A:96-129)
Exon 1.4 (A:129-158)
Exon 1.5 (A:158-290)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000010799
1
ENSRNOE00000344752
chr13:
111057427-111057067
361
CR1L_RAT
1-36
36
0
-
-
1.2
ENSRNOT00000010799
2
ENSRNOE00000259154
chr13:
111054088-111053909
180
CR1L_RAT
36-96
61
1
A:37-96
60
1.3
ENSRNOT00000010799
3
ENSRNOE00000259145
chr13:
111053179-111053080
100
CR1L_RAT
96-129
34
1
A:96-129
34
1.4
ENSRNOT00000010799
4
ENSRNOE00000258717
chr13:
111047369-111047284
86
CR1L_RAT
129-158
30
1
A:129-158
30
1.5
ENSRNOT00000010799
5
ENSRNOE00000258708
chr13:
111032883-111032485
399
CR1L_RAT
158-291
134
1
A:158-290
133
1.6
ENSRNOT00000010799
6
ENSRNOE00000258698
chr13:
111029696-111029594
103
CR1L_RAT
291-325
35
0
-
-
1.7
ENSRNOT00000010799
7
ENSRNOE00000258691
chr13:
111028340-111028255
86
CR1L_RAT
325-354
30
0
-
-
1.8
ENSRNOT00000010799
8
ENSRNOE00000258677
chr13:
111025811-111025626
186
CR1L_RAT
354-416
63
0
-
-
1.9
ENSRNOT00000010799
9
ENSRNOE00000362867
chr13:
111021835-111021650
186
CR1L_RAT
416-478
63
0
-
-
1.10
ENSRNOT00000010799
10
ENSRNOE00000258669
chr13:
111019296-111019273
24
CR1L_RAT
478-486
9
0
-
-
1.11
ENSRNOT00000010799
11
ENSRNOE00000258661
chr13:
111018067-111017992
76
CR1L_RAT
486-511
26
0
-
-
1.12
ENSRNOT00000010799
12
ENSRNOE00000281590
chr13:
111013671-111013567
105
CR1L_RAT
511-546
36
0
-
-
1.13
ENSRNOT00000010799
13
ENSRNOE00000076758
chr13:
111010497-111010302
196
CR1L_RAT
546-559
14
0
-
-
[
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]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Atom Selection
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)
Protein
Nucleic
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Sidechain
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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